RNA–Protein interactions for RNA: ENST00000437863.2

PTPN20-210, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 5

Gene PTPN20, Length 3,125 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-210ENST00000437863 NOM1Q5C9Z4 860 aaKnown RBP8.7□□□□□ -1.02
PTPN20-210ENST00000437863 MED4Q9NPJ6 270 aa8.7□□□□□ -1.02
PTPN20-210ENST00000437863 IGSF1Q8N6C5 1336 aa8.7□□□□□ -1.02
PTPN20-210ENST00000437863 RGPD2P0DJD1 1756 aa8.7□□□□□ -1.02
PTPN20-210ENST00000437863 KIF1CO43896 1103 aaKnown RBP8.69□□□□□ -1.02
PTPN20-210ENST00000437863 PLA2G4AP47712 749 aa8.69□□□□□ -1.02
PTPN20-210ENST00000437863 SAFB2Q14151 953 aaKnown RBP eCLIP8.69□□□□□ -1.02
PTPN20-210ENST00000437863 FAM184AQ8NB25 1140 aa8.69□□□□□ -1.02
PTPN20-210ENST00000437863 FHOD1Q9Y613 1164 aa8.69□□□□□ -1.02
PTPN20-210ENST00000437863 TMPOP42166 694 aaKnown RBP8.69□□□□□ -1.02
PTPN20-210ENST00000437863 UVSSAQ2YD98 709 aa8.69□□□□□ -1.02
PTPN20-210ENST00000437863 DRC7Q8IY82 874 aa8.69□□□□□ -1.02
PTPN20-210ENST00000437863 PRPF38AQ8NAV1 312 aaKnown RBP8.69□□□□□ -1.02
PTPN20-210ENST00000437863 PAXBP1Q9Y5B6 917 aa8.69□□□□□ -1.02
PTPN20-210ENST00000437863 RGPD5Q99666 1765 aa8.69□□□□□ -1.02
PTPN20-210ENST00000437863 KIAA0232Q92628 1395 aa8.69□□□□□ -1.02
PTPN20-210ENST00000437863 PNMA6AP0CW24 399 aaPredicted RBP8.69□□□□□ -1.02
PTPN20-210ENST00000437863 LMAN1P49257 510 aa8.69□□□□□ -1.02
PTPN20-210ENST00000437863 NFE2L2Q16236 605 aa8.69□□□□□ -1.02
PTPN20-210ENST00000437863 CEP135Q66GS9 1140 aa8.69□□□□□ -1.02
PTPN20-210ENST00000437863 NME9Q86XW9 330 aa8.69□□□□□ -1.02
PTPN20-210ENST00000437863 MNS1Q8NEH6 495 aa8.69□□□□□ -1.02
PTPN20-210ENST00000437863 GPS2Q13227 327 aa8.68□□□□□ -1.02
PTPN20-210ENST00000437863 ALDH1L2Q3SY69 923 aa8.68□□□□□ -1.02
PTPN20-210ENST00000437863 CCDC186Q7Z3E2 898 aa8.68□□□□□ -1.02
PTPN20-210ENST00000437863 RAI14Q9P0K7 980 aa8.68□□□□□ -1.02
PTPN20-210ENST00000437863 TRIM35Q9UPQ4 493 aa8.68□□□□□ -1.02
PTPN20-210ENST00000437863 PTPRCP08575 1304 aa8.68□□□□□ -1.02
PTPN20-210ENST00000437863 ERCC6LQ2NKX8 1250 aa8.68□□□□□ -1.02
PTPN20-210ENST00000437863 PHF8Q9UPP1 1060 aa8.68□□□□□ -1.02
PTPN20-210ENST00000437863 PAPPAQ13219 1627 aa8.68□□□□□ -1.02
PTPN20-210ENST00000437863 SCP2P22307 547 aa8.67□□□□□ -1.02
PTPN20-210ENST00000437863 TTC19Q6DKK2 380 aaPredicted RBP8.67□□□□□ -1.02
PTPN20-210ENST00000437863 TBC1D9Q6ZT07 1266 aa8.67□□□□□ -1.02
PTPN20-210ENST00000437863 KCNH5Q8NCM2 988 aa8.67□□□□□ -1.02
PTPN20-210ENST00000437863 C19orf44Q9H6X5 657 aa8.67□□□□□ -1.02
PTPN20-210ENST00000437863 CPDO75976 1380 aa8.67□□□□□ -1.02
PTPN20-210ENST00000437863 CLCN6P51797 869 aa8.67□□□□□ -1.02
PTPN20-210ENST00000437863 GSCP56915 257 aaPredicted RBP8.67□□□□□ -1.02
PTPN20-210ENST00000437863 TPM4P67936 248 aa8.67□□□□□ -1.02
PTPN20-210ENST00000437863 MCTP2Q6DN12 878 aa8.67□□□□□ -1.02
PTPN20-210ENST00000437863 NRBP1Q9UHY1 535 aa8.67□□□□□ -1.02
PTPN20-210ENST00000437863 MRC1P22897 1456 aa8.67□□□□□ -1.02
PTPN20-210ENST00000437863 MAGEA9P43362 315 aa8.67□□□□□ -1.02
PTPN20-210ENST00000437863 CICQ96RK0 1608 aaPredicted RBP8.66□□□□□ -1.02
PTPN20-210ENST00000437863 MPHOSPH10O00566 681 aaKnown RBP8.66□□□□□ -1.02
PTPN20-210ENST00000437863 RARSP54136 660 aaKnown RBP8.66□□□□□ -1.02
PTPN20-210ENST00000437863 FBXO18Q8NFZ0 1043 aa8.66□□□□□ -1.02
PTPN20-210ENST00000437863 SLC24A3Q9HC58 644 aa8.66□□□□□ -1.02
PTPN20-210ENST00000437863 LAMB4A4D0S4 1761 aa8.66□□□□□ -1.02
PTPN20-210ENST00000437863 TNS3Q68CZ2 1445 aa8.66□□□□□ -1.02
PTPN20-210ENST00000437863 PPP1R12AO14974 1030 aaPredicted RBP8.66□□□□□ -1.02
PTPN20-210ENST00000437863 FOXR1Q6PIV2 292 aa8.66□□□□□ -1.02
PTPN20-210ENST00000437863 CCDC34Q96HJ3 373 aa8.66□□□□□ -1.02
PTPN20-210ENST00000437863 CRB1P82279 1406 aa8.66□□□□□ -1.02
PTPN20-210ENST00000437863 EIF3CLB5ME19 914 aaKnown RBP8.65□□□□□ -1.02
PTPN20-210ENST00000437863 TPM3P06753 285 aa8.65□□□□□ -1.02
PTPN20-210ENST00000437863 U2AF1L5P0DN76 240 aaPredicted RBP8.65□□□□□ -1.02
PTPN20-210ENST00000437863 U2AF1Q01081 240 aaKnown RBP eCLIP8.65□□□□□ -1.02
PTPN20-210ENST00000437863 CWC27Q6UX04 472 aaKnown RBP8.65□□□□□ -1.02
PTPN20-210ENST00000437863 NOL8Q76FK4 1167 aaKnown RBP8.65□□□□□ -1.02
PTPN20-210ENST00000437863 EIF3CQ99613 913 aaKnown RBP8.65□□□□□ -1.02
PTPN20-210ENST00000437863 PDRG1Q9NUG6 133 aa8.65□□□□□ -1.02
PTPN20-210ENST00000437863 OAS2P29728 719 aaKnown RBP8.65□□□□□ -1.02
PTPN20-210ENST00000437863 MNAT1P51948 309 aa8.65□□□□□ -1.02
PTPN20-210ENST00000437863 SKIDA1Q1XH10 827 aa8.65□□□□□ -1.02
PTPN20-210ENST00000437863 GIMAP6Q6P9H5 292 aa8.65□□□□□ -1.02
PTPN20-210ENST00000437863 ZNF513Q8N8E2 541 aaPredicted RBP8.65□□□□□ -1.02
PTPN20-210ENST00000437863 GOLGA5Q8TBA6 731 aa8.65□□□□□ -1.02
PTPN20-210ENST00000437863 ERO1AQ96HE7 468 aa8.65□□□□□ -1.02
PTPN20-210ENST00000437863 TRMT1Q9NXH9 659 aaKnown RBP8.65□□□□□ -1.02
PTPN20-210ENST00000437863 SHANK3Q9BYB0 1731 aa8.65□□□□□ -1.02
PTPN20-210ENST00000437863 USP27XA6NNY8 438 aa8.65□□□□□ -1.03
PTPN20-210ENST00000437863 SEC31AO94979 1220 aaKnown RBP8.65□□□□□ -1.03
PTPN20-210ENST00000437863 ARID4AP29374 1257 aaPredicted RBP8.65□□□□□ -1.03
PTPN20-210ENST00000437863 LRRN4CLQ8ND94 238 aa8.65□□□□□ -1.03
PTPN20-210ENST00000437863 ARHGAP45Q92619 1136 aa8.65□□□□□ -1.03
PTPN20-210ENST00000437863 SYTL4Q96C24 671 aaPredicted RBP8.65□□□□□ -1.03
PTPN20-210ENST00000437863 CWC22Q9HCG8 908 aaKnown RBP8.65□□□□□ -1.03
PTPN20-210ENST00000437863 RRP7AQ9Y3A4 280 aaKnown RBP8.65□□□□□ -1.03
PTPN20-210ENST00000437863 PXDNLA1KZ92 1463 aa8.64□□□□□ -1.03
PTPN20-210ENST00000437863 UBR2Q8IWV8 1755 aa8.64□□□□□ -1.03
PTPN20-210ENST00000437863 CLSTN1O94985 981 aa8.64□□□□□ -1.03
PTPN20-210ENST00000437863 EIF4A2Q14240 407 aaKnown RBP8.64□□□□□ -1.03
PTPN20-210ENST00000437863 MVPQ14764 893 aaKnown RBP8.64□□□□□ -1.03
PTPN20-210ENST00000437863 MAP9Q49MG5 647 aa8.64□□□□□ -1.03
PTPN20-210ENST00000437863 ITPRIPQ8IWB1 547 aa8.64□□□□□ -1.03
PTPN20-210ENST00000437863 BORCS6Q96GS4 357 aa8.64□□□□□ -1.03
PTPN20-210ENST00000437863 LTBP4Q8N2S1 1624 aa8.64□□□□□ -1.03
PTPN20-210ENST00000437863 COL14A1Q05707 1796 aaKnown RBP8.64□□□□□ -1.03
PTPN20-210ENST00000437863 H0YHG0 523 aa8.64□□□□□ -1.03
PTPN20-210ENST00000437863 ECM2O94769 699 aaPredicted RBP8.64□□□□□ -1.03
PTPN20-210ENST00000437863 SARNPP82979 210 aaKnown RBP8.64□□□□□ -1.03
PTPN20-210ENST00000437863 RABEP1Q15276 862 aa8.64□□□□□ -1.03
PTPN20-210ENST00000437863 NAIF1Q69YI7 327 aaPredicted RBP8.64□□□□□ -1.03
PTPN20-210ENST00000437863 USP48Q86UV5 1035 aa8.64□□□□□ -1.03
PTPN20-210ENST00000437863 ERBB3P21860 1342 aa8.64□□□□□ -1.03
PTPN20-210ENST00000437863 MAP3K19Q56UN5 1328 aa8.64□□□□□ -1.03
PTPN20-210ENST00000437863 LRP6O75581 1613 aa8.64□□□□□ -1.03
PTPN20-210ENST00000437863 NCKAP5LQ9HCH0 1330 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms