RNA–Protein interactions for RNA: ENST00000437568.6

PMS2P3-205, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, human

TSL 5

Gene PMS2P3, Length 1,185 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PMS2P3-205	ENST00000437568	SLC10A5	Q5PT55	438 aa		32.62	■■■□□ 2.81
PMS2P3-205	ENST00000437568	NLRP10	Q86W26	655 aa		32.62	■■■□□ 2.81
PMS2P3-205	ENST00000437568	GLTPD2	A6NH11	291 aa		32.61	■■■□□ 2.81
PMS2P3-205	ENST00000437568	TOMM70	O94826	608 aa		32.61	■■■□□ 2.81
PMS2P3-205	ENST00000437568	CCDC93	Q567U6	631 aa		32.61	■■■□□ 2.81
PMS2P3-205	ENST00000437568	C8orf58	Q8NAV2	365 aa		32.61	■■■□□ 2.81
PMS2P3-205	ENST00000437568	PLBD2	Q8NHP8	589 aa		32.61	■■■□□ 2.81
PMS2P3-205	ENST00000437568	HYPK	Q9NX55	129 aa		32.61	■■■□□ 2.81
PMS2P3-205	ENST00000437568	CACNA1S	Q13698	1873 aa		32.61	■■■□□ 2.81
PMS2P3-205	ENST00000437568	ELL2	O00472	640 aa	Predicted RBP	32.6	■■■□□ 2.81
PMS2P3-205	ENST00000437568	OLFM4	Q6UX06	510 aa		32.6	■■■□□ 2.81
PMS2P3-205	ENST00000437568	ANKRD13D	Q6ZTN6	518 aa		32.6	■■■□□ 2.81
PMS2P3-205	ENST00000437568	C3orf67	Q6ZVT6	689 aa		32.6	■■■□□ 2.81
PMS2P3-205	ENST00000437568	RRAGC	Q9HB90	399 aa		32.6	■■■□□ 2.81
PMS2P3-205	ENST00000437568	NCBP3	Q53F19	620 aa	Known RBP	32.59	■■■□□ 2.81
PMS2P3-205	ENST00000437568	WWC1	Q8IX03	1113 aa		32.59	■■■□□ 2.81
PMS2P3-205	ENST00000437568	CCDC88A	Q3V6T2	1871 aa		32.58	■■■□□ 2.81
PMS2P3-205	ENST00000437568	RNF123	Q5XPI4	1314 aa		32.57	■■■□□ 2.8
PMS2P3-205	ENST00000437568	RPGR	Q92834	1020 aa	Known RBP	32.57	■■■□□ 2.8
PMS2P3-205	ENST00000437568	NLRP3	Q96P20	1036 aa		32.56	■■■□□ 2.8
PMS2P3-205	ENST00000437568	CRAMP1	Q96RY5	1269 aa		32.56	■■■□□ 2.8
PMS2P3-205	ENST00000437568	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.55	■■■□□ 2.8
PMS2P3-205	ENST00000437568	RTKN2	Q8IZC4	609 aa		32.55	■■■□□ 2.8
PMS2P3-205	ENST00000437568	SYNE4	Q8N205	404 aa		32.54	■■■□□ 2.8
PMS2P3-205	ENST00000437568	RBM17	Q96I25	401 aa	Known RBP	32.54	■■■□□ 2.8
PMS2P3-205	ENST00000437568	ISCA1	Q9BUE6	129 aa		32.54	■■■□□ 2.8
PMS2P3-205	ENST00000437568	TIAM2	Q8IVF5	1701 aa		32.54	■■■□□ 2.8
PMS2P3-205	ENST00000437568	ANKRD36C	Q5JPF3	1778 aa		32.53	■■■□□ 2.8
PMS2P3-205	ENST00000437568	HSPA6	P17066	643 aa		32.53	■■■□□ 2.8
PMS2P3-205	ENST00000437568	TSPYL6	Q8N831	410 aa		32.53	■■■□□ 2.8
PMS2P3-205	ENST00000437568	TSR2	Q969E8	191 aa	Known RBP	32.53	■■■□□ 2.8
PMS2P3-205	ENST00000437568	TRMT112	Q9UI30	125 aa	Known RBP	32.53	■■■□□ 2.8
PMS2P3-205	ENST00000437568	RBM46	Q8TBY0	533 aa	Known RBP	32.52	■■■□□ 2.8
PMS2P3-205	ENST00000437568	PHAX	Q9H814	394 aa	Known RBP	32.52	■■■□□ 2.8
PMS2P3-205	ENST00000437568	SNED1	Q8TER0	1413 aa		32.51	■■■□□ 2.8
PMS2P3-205	ENST00000437568	DPY19L2	Q6NUT2	758 aa		32.51	■■■□□ 2.79
PMS2P3-205	ENST00000437568	DICER1	Q9UPY3	1922 aa	Known RBP	32.51	■■■□□ 2.79
PMS2P3-205	ENST00000437568	IL16	Q14005	1332 aa		32.51	■■■□□ 2.79
PMS2P3-205	ENST00000437568	HCLS1	P14317	486 aa	Predicted RBP	32.5	■■■□□ 2.79
PMS2P3-205	ENST00000437568	CC2D2B	Q6DHV5	1058 aa		32.5	■■■□□ 2.79
PMS2P3-205	ENST00000437568	C16orf71	Q8IYS4	520 aa	Predicted RBP	32.5	■■■□□ 2.79
PMS2P3-205	ENST00000437568	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.5	■■■□□ 2.79
PMS2P3-205	ENST00000437568	SH3TC1	Q8TE82	1336 aa		32.5	■■■□□ 2.79
PMS2P3-205	ENST00000437568	POTEC	B2RU33	542 aa		32.49	■■■□□ 2.79
PMS2P3-205	ENST00000437568	ATP5J2-PTCD1	G3V325	749 aa		32.48	■■■□□ 2.79
PMS2P3-205	ENST00000437568	VEGFA	P15692	232 aa	Predicted RBP	32.48	■■■□□ 2.79
PMS2P3-205	ENST00000437568	TRIM28	Q13263	835 aa	Known RBP	32.48	■■■□□ 2.79
PMS2P3-205	ENST00000437568	CCDC30	Q5VVM6	783 aa		32.48	■■■□□ 2.79
PMS2P3-205	ENST00000437568	ZNF428	Q96B54	188 aa		32.47	■■■□□ 2.79
PMS2P3-205	ENST00000437568	PSMD1	Q99460	953 aa		32.47	■■■□□ 2.79
PMS2P3-205	ENST00000437568	CHMP4A	Q9BY43	222 aa		32.47	■■■□□ 2.79
PMS2P3-205	ENST00000437568	SLC51A	Q86UW1	340 aa		32.46	■■■□□ 2.79
PMS2P3-205	ENST00000437568	PPEF1	O14829	653 aa	Predicted RBP	32.45	■■■□□ 2.79
PMS2P3-205	ENST00000437568	GOLGA2	Q08379	1002 aa		32.45	■■■□□ 2.79
PMS2P3-205	ENST00000437568	RIC3	Q7Z5B4	369 aa		32.45	■■■□□ 2.79
PMS2P3-205	ENST00000437568	SALL2	Q9Y467	1007 aa	Predicted RBP	32.44	■■■□□ 2.78
PMS2P3-205	ENST00000437568	ABCC4	O15439	1325 aa		32.44	■■■□□ 2.78
PMS2P3-205	ENST00000437568	DDN	O94850	711 aa	Predicted RBP	32.43	■■■□□ 2.78
PMS2P3-205	ENST00000437568	IARS	P41252	1262 aa	Known RBP	32.43	■■■□□ 2.78
PMS2P3-205	ENST00000437568	GRIPAP1	Q4V328	841 aa		32.43	■■■□□ 2.78
PMS2P3-205	ENST00000437568	WDR63	Q8IWG1	891 aa		32.43	■■■□□ 2.78
PMS2P3-205	ENST00000437568	FAM89A	Q96GI7	184 aa		32.43	■■■□□ 2.78
PMS2P3-205	ENST00000437568	TCERG1	O14776	1098 aa	Known RBP	32.42	■■■□□ 2.78
PMS2P3-205	ENST00000437568	FSTL1	Q12841	308 aa		32.42	■■■□□ 2.78
PMS2P3-205	ENST00000437568	FAM9B	Q8IZU0	186 aa		32.42	■■■□□ 2.78
PMS2P3-205	ENST00000437568	WDR90	Q96KV7	1748 aa		32.42	■■■□□ 2.78
PMS2P3-205	ENST00000437568	TWISTNB	Q3B726	338 aa	Predicted RBP	32.41	■■■□□ 2.78
PMS2P3-205	ENST00000437568	ATP6V0A2	Q9Y487	856 aa		32.41	■■■□□ 2.78
PMS2P3-205	ENST00000437568	BBOX1	O75936	387 aa		32.39	■■■□□ 2.78
PMS2P3-205	ENST00000437568	LAMB2	P55268	1798 aa		32.38	■■■□□ 2.77
PMS2P3-205	ENST00000437568	FANCI	Q9NVI1	1328 aa		32.38	■■■□□ 2.77
PMS2P3-205	ENST00000437568	DDX46	Q7L014	1031 aa	Known RBP	32.38	■■■□□ 2.77
PMS2P3-205	ENST00000437568	MYD88	Q99836	296 aa		32.38	■■■□□ 2.77
PMS2P3-205	ENST00000437568	FZD9	O00144	591 aa		32.37	■■■□□ 2.77
PMS2P3-205	ENST00000437568	METTL22	Q9BUU2	404 aa	Predicted RBP	32.37	■■■□□ 2.77
PMS2P3-205	ENST00000437568	ZNF541	Q9H0D2	1346 aa		32.36	■■■□□ 2.77
PMS2P3-205	ENST00000437568	DDX58	O95786	925 aa	Known RBP	32.36	■■■□□ 2.77
PMS2P3-205	ENST00000437568	GRAP	Q13588	217 aa		32.36	■■■□□ 2.77
PMS2P3-205	ENST00000437568	SF3B3	Q15393	1217 aa	Known RBP	32.36	■■■□□ 2.77
PMS2P3-205	ENST00000437568	SP8	Q8IXZ3	490 aa		32.36	■■■□□ 2.77
PMS2P3-205	ENST00000437568	SMC1B	Q8NDV3	1235 aa		32.36	■■■□□ 2.77
PMS2P3-205	ENST00000437568	GRAPL	Q8TC17	118 aa	Predicted RBP	32.36	■■■□□ 2.77
PMS2P3-205	ENST00000437568	APLP1	P51693	650 aa		32.35	■■■□□ 2.77
PMS2P3-205	ENST00000437568	RTL5	Q5HYW3	569 aa	Predicted RBP	32.35	■■■□□ 2.77
PMS2P3-205	ENST00000437568	STK31	Q9BXU1	1019 aa		32.35	■■■□□ 2.77
PMS2P3-205	ENST00000437568	IRS4	O14654	1257 aa	Predicted RBP	32.34	■■■□□ 2.77
PMS2P3-205	ENST00000437568	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.34	■■■□□ 2.77
PMS2P3-205	ENST00000437568	CCDC191	Q8NCU4	936 aa		32.34	■■■□□ 2.77
PMS2P3-205	ENST00000437568	L3MBTL3	Q96JM7	780 aa	Predicted RBP	32.34	■■■□□ 2.77
PMS2P3-205	ENST00000437568	DDX60	Q8IY21	1712 aa	Known RBP	32.34	■■■□□ 2.77
PMS2P3-205	ENST00000437568	KSR2	Q6VAB6	950 aa		32.33	■■■□□ 2.77
PMS2P3-205	ENST00000437568	JDP2	Q8WYK2	163 aa		32.33	■■■□□ 2.77
PMS2P3-205	ENST00000437568	TMX4	Q9H1E5	349 aa	Predicted RBP	32.33	■■■□□ 2.77
PMS2P3-205	ENST00000437568	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.33	■■■□□ 2.77
PMS2P3-205	ENST00000437568	MAP3K2	Q9Y2U5	619 aa		32.33	■■■□□ 2.77
PMS2P3-205	ENST00000437568	COL4A5	P29400	1685 aa		32.32	■■■□□ 2.76
PMS2P3-205	ENST00000437568	G2E3	Q7L622	706 aa		32.32	■■■□□ 2.76
PMS2P3-205	ENST00000437568	PI4KAP2	A4QPH2	592 aa		32.31	■■■□□ 2.76
PMS2P3-205	ENST00000437568	VAMP4	O75379	141 aa		32.31	■■■□□ 2.76
PMS2P3-205	ENST00000437568	SLC4A2	P04920	1241 aa		32.31	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms