RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 MKRN1Q9UHC7 482 aaKnown RBP12.82□□□□□ -0.36
SCN4A-201ENST00000435607 MFSD6Q6ZSS7 791 aa12.82□□□□□ -0.36
SCN4A-201ENST00000435607 EXOC1Q9NV70 894 aa12.82□□□□□ -0.36
SCN4A-201ENST00000435607 KMT5BQ4FZB7 885 aa12.82□□□□□ -0.36
SCN4A-201ENST00000435607 EHBP1Q8NDI1 1231 aa12.82□□□□□ -0.36
SCN4A-201ENST00000435607 POLR3GO15318 223 aaPredicted RBP12.82□□□□□ -0.36
SCN4A-201ENST00000435607 SMC1BQ8NDV3 1235 aa12.82□□□□□ -0.36
SCN4A-201ENST00000435607 DNA2P51530 1060 aa12.81□□□□□ -0.36
SCN4A-201ENST00000435607 PSMC4P43686 418 aa12.81□□□□□ -0.36
SCN4A-201ENST00000435607 GNAQP50148 359 aa12.81□□□□□ -0.36
SCN4A-201ENST00000435607 RASAL2Q9UJF2 1139 aa12.81□□□□□ -0.36
SCN4A-201ENST00000435607 TSPY3P0CV98 308 aa12.81□□□□□ -0.36
SCN4A-201ENST00000435607 TSPY8P0CW00 308 aa12.81□□□□□ -0.36
SCN4A-201ENST00000435607 SLC8A3P57103 927 aa12.81□□□□□ -0.36
SCN4A-201ENST00000435607 GTPBP4Q9BZE4 634 aaKnown RBP12.81□□□□□ -0.36
SCN4A-201ENST00000435607 RRS1Q15050 365 aaKnown RBP12.81□□□□□ -0.36
SCN4A-201ENST00000435607 VIMP08670 466 aaKnown RBP12.81□□□□□ -0.36
SCN4A-201ENST00000435607 TMEM67Q5HYA8 995 aa12.81□□□□□ -0.36
SCN4A-201ENST00000435607 TSR2Q969E8 191 aaKnown RBP12.81□□□□□ -0.36
SCN4A-201ENST00000435607 BOLA2Q9H3K6 86 aa12.81□□□□□ -0.36
SCN4A-201ENST00000435607 CACYBPQ9HB71 228 aaKnown RBP12.81□□□□□ -0.36
SCN4A-201ENST00000435607 PLEKHH1Q9ULM0 1364 aa12.81□□□□□ -0.36
SCN4A-201ENST00000435607 PTPN14Q15678 1187 aa12.81□□□□□ -0.36
SCN4A-201ENST00000435607 KIF18AQ8NI77 898 aa12.81□□□□□ -0.36
SCN4A-201ENST00000435607 TNPO1Q92973 898 aaKnown RBP12.81□□□□□ -0.36
SCN4A-201ENST00000435607 NUDT16Q96DE0 195 aaKnown RBP12.81□□□□□ -0.36
SCN4A-201ENST00000435607 DAAM2Q86T65 1068 aa12.8□□□□□ -0.36
SCN4A-201ENST00000435607 GABPB2Q8TAK5 448 aaPredicted RBP12.8□□□□□ -0.36
SCN4A-201ENST00000435607 CWC25Q9NXE8 425 aaPredicted RBP12.8□□□□□ -0.36
SCN4A-201ENST00000435607 UQCRFS1P1P0C7P4 283 aa12.8□□□□□ -0.36
SCN4A-201ENST00000435607 SMARCC1Q92922 1105 aaPredicted RBP12.8□□□□□ -0.36
SCN4A-201ENST00000435607 CCDC77Q9BR77 488 aa12.8□□□□□ -0.36
SCN4A-201ENST00000435607 NYXQ9GZU5 481 aa12.8□□□□□ -0.36
SCN4A-201ENST00000435607 GPHNQ9NQX3 736 aaPredicted RBP12.8□□□□□ -0.36
SCN4A-201ENST00000435607 RIOK3O14730 519 aaKnown RBP12.8□□□□□ -0.36
SCN4A-201ENST00000435607 CEP112Q8N8E3 955 aa12.8□□□□□ -0.36
SCN4A-201ENST00000435607 HAUS7Q99871 368 aa12.8□□□□□ -0.36
SCN4A-201ENST00000435607 SELENOOQ9BVL4 669 aa12.8□□□□□ -0.36
SCN4A-201ENST00000435607 EPRSP07814 1512 aaKnown RBP12.8□□□□□ -0.36
SCN4A-201ENST00000435607 FBF1Q8TES7 1133 aa12.8□□□□□ -0.36
SCN4A-201ENST00000435607 GOLGA6L9A6NEM1 432 aa12.8□□□□□ -0.36
SCN4A-201ENST00000435607 BMP15O95972 392 aa12.8□□□□□ -0.36
SCN4A-201ENST00000435607 LDHAL6AQ6ZMR3 332 aa12.8□□□□□ -0.36
SCN4A-201ENST00000435607 ZNF804AQ7Z570 1209 aa12.79□□□□□ -0.36
SCN4A-201ENST00000435607 DUSP27Q5VZP5 1158 aa12.79□□□□□ -0.36
SCN4A-201ENST00000435607 CIZ1Q9ULV3 898 aaPredicted RBP12.79□□□□□ -0.36
SCN4A-201ENST00000435607 PARP3Q9Y6F1 533 aa12.79□□□□□ -0.36
SCN4A-201ENST00000435607 PPP1R9BQ96SB3 815 aa12.79□□□□□ -0.36
SCN4A-201ENST00000435607 CCT6BQ92526 530 aa12.79□□□□□ -0.36
SCN4A-201ENST00000435607 SLC12A5Q9H2X9 1139 aa12.79□□□□□ -0.36
SCN4A-201ENST00000435607 IARSP41252 1262 aaKnown RBP12.79□□□□□ -0.36
SCN4A-201ENST00000435607 MXRA7P84157 204 aa12.79□□□□□ -0.36
SCN4A-201ENST00000435607 FANCIQ9NVI1 1328 aa12.78□□□□□ -0.36
SCN4A-201ENST00000435607 SMARCC2Q8TAQ2 1214 aa12.78□□□□□ -0.36
SCN4A-201ENST00000435607 TMTC2Q8N394 836 aa12.78□□□□□ -0.36
SCN4A-201ENST00000435607 STX8Q9UNK0 236 aa12.78□□□□□ -0.36
SCN4A-201ENST00000435607 SPDYE3A6NKU9 549 aa12.78□□□□□ -0.36
SCN4A-201ENST00000435607 GPTP24298 496 aa12.78□□□□□ -0.36
SCN4A-201ENST00000435607 CCDC144CPQ8IYA2 1237 aa12.78□□□□□ -0.36
SCN4A-201ENST00000435607 STMN4Q9H169 189 aaPredicted RBP12.78□□□□□ -0.36
SCN4A-201ENST00000435607 DBF4Q9UBU7 674 aaPredicted RBP12.78□□□□□ -0.36
SCN4A-201ENST00000435607 WIZO95785 1651 aa12.78□□□□□ -0.36
SCN4A-201ENST00000435607 PLCG2P16885 1265 aa12.78□□□□□ -0.36
SCN4A-201ENST00000435607 CADPS2Q86UW7 1296 aa12.78□□□□□ -0.36
SCN4A-201ENST00000435607 PODXL2Q9NZ53 605 aa12.78□□□□□ -0.36
SCN4A-201ENST00000435607 RAD54L2Q9Y4B4 1467 aa12.78□□□□□ -0.36
SCN4A-201ENST00000435607 ATP2A2P16615 1042 aaKnown RBP12.78□□□□□ -0.36
SCN4A-201ENST00000435607 RNF187Q5TA31 235 aaPredicted RBP12.78□□□□□ -0.36
SCN4A-201ENST00000435607 NUTM1Q86Y26 1132 aa12.78□□□□□ -0.36
SCN4A-201ENST00000435607 GOLGA1Q92805 767 aa12.78□□□□□ -0.36
SCN4A-201ENST00000435607 CCDC63Q8NA47 563 aa12.77□□□□□ -0.36
SCN4A-201ENST00000435607 MMRN2Q9H8L6 949 aa12.77□□□□□ -0.36
SCN4A-201ENST00000435607 UBAP1LF5GYI3 381 aa12.77□□□□□ -0.36
SCN4A-201ENST00000435607 TPD52P55327 224 aaPredicted RBP12.77□□□□□ -0.36
SCN4A-201ENST00000435607 ERBINQ96RT1 1412 aa12.77□□□□□ -0.36
SCN4A-201ENST00000435607 MX1P20591 662 aa12.77□□□□□ -0.36
SCN4A-201ENST00000435607 CFAP58Q5T655 872 aa12.77□□□□□ -0.36
SCN4A-201ENST00000435607 NLRP3Q96P20 1036 aa12.77□□□□□ -0.36
SCN4A-201ENST00000435607 NSRP1Q9H0G5 558 aaKnown RBP12.77□□□□□ -0.36
SCN4A-201ENST00000435607 CNGA1P29973 690 aa12.77□□□□□ -0.37
SCN4A-201ENST00000435607 FMNL3Q8IVF7 1028 aa12.77□□□□□ -0.37
SCN4A-201ENST00000435607 KRT23Q9C075 422 aa12.77□□□□□ -0.37
SCN4A-201ENST00000435607 FAM169AQ9Y6X4 670 aa12.77□□□□□ -0.37
SCN4A-201ENST00000435607 SPAG5Q96R06 1193 aa12.77□□□□□ -0.37
SCN4A-201ENST00000435607 EYA3Q99504 573 aa12.77□□□□□ -0.37
SCN4A-201ENST00000435607 VEZTQ9HBM0 779 aa12.77□□□□□ -0.37
SCN4A-201ENST00000435607 KIF5AQ12840 1032 aa12.77□□□□□ -0.37
SCN4A-201ENST00000435607 FAM13AO94988 1023 aa12.76□□□□□ -0.37
SCN4A-201ENST00000435607 ZBTB16Q05516 673 aa12.76□□□□□ -0.37
SCN4A-201ENST00000435607 SMC6Q96SB8 1091 aa12.76□□□□□ -0.37
SCN4A-201ENST00000435607 SH2D4AQ9H788 454 aa12.76□□□□□ -0.37
SCN4A-201ENST00000435607 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.76□□□□□ -0.37
SCN4A-201ENST00000435607 GSDMDP57764 484 aa12.76□□□□□ -0.37
SCN4A-201ENST00000435607 GSTA5Q7RTV2 222 aa12.76□□□□□ -0.37
SCN4A-201ENST00000435607 IFNL2Q8IZJ0 200 aa12.76□□□□□ -0.37
SCN4A-201ENST00000435607 HOOK2Q96ED9 719 aa12.76□□□□□ -0.37
SCN4A-201ENST00000435607 MAATS1Q7Z4T9 603 aa12.76□□□□□ -0.37
SCN4A-201ENST00000435607 SERPINA10Q9UK55 444 aa12.76□□□□□ -0.37
SCN4A-201ENST00000435607 MRVI1Q9Y6F6 885 aa12.76□□□□□ -0.37
SCN4A-201ENST00000435607 DYNC1I1O14576 645 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms