RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 UBN2Q6ZU65 1347 aa18.05■□□□□ 0.48
LINC00028-201ENST00000435497 KDM3BQ7LBC6 1761 aa18.05■□□□□ 0.48
LINC00028-201ENST00000435497 SUSD4Q5VX71 490 aa18.05■□□□□ 0.48
LINC00028-201ENST00000435497 PLEKHF1Q96S99 279 aa18.05■□□□□ 0.48
LINC00028-201ENST00000435497 THUMPD2Q9BTF0 503 aaKnown RBP18.05■□□□□ 0.48
LINC00028-201ENST00000435497 GPTP24298 496 aa18.04■□□□□ 0.48
LINC00028-201ENST00000435497 CC2D2BQ6DHV5 1058 aa18.04■□□□□ 0.48
LINC00028-201ENST00000435497 PNISRQ8TF01 805 aaKnown RBP18.04■□□□□ 0.48
LINC00028-201ENST00000435497 JDP2Q8WYK2 163 aa18.04■□□□□ 0.48
LINC00028-201ENST00000435497 RASSF10A6NK89 507 aa18.03■□□□□ 0.48
LINC00028-201ENST00000435497 MYL6BP14649 208 aa18.03■□□□□ 0.48
LINC00028-201ENST00000435497 CTCFP49711 727 aaPredicted RBP18.03■□□□□ 0.48
LINC00028-201ENST00000435497 DEFB115Q30KQ5 88 aa18.03■□□□□ 0.48
LINC00028-201ENST00000435497 C3orf67Q6ZVT6 689 aa18.03■□□□□ 0.48
LINC00028-201ENST00000435497 ZNF34Q8IZ26 560 aa18.03■□□□□ 0.48
LINC00028-201ENST00000435497 ZBTB3Q9H5J0 574 aa18.03■□□□□ 0.48
LINC00028-201ENST00000435497 LTBP1Q14766 1721 aa18.03■□□□□ 0.48
LINC00028-201ENST00000435497 FMR1Q06787 632 aaKnown RBP eCLIP18.02■□□□□ 0.48
LINC00028-201ENST00000435497 RPGRQ92834 1020 aaKnown RBP18.02■□□□□ 0.48
LINC00028-201ENST00000435497 GJA3Q9Y6H8 435 aa18.02■□□□□ 0.48
LINC00028-201ENST00000435497 RIC1Q4ADV7 1423 aa18.01■□□□□ 0.47
LINC00028-201ENST00000435497 NTSR2O95665 410 aa18.01■□□□□ 0.47
LINC00028-201ENST00000435497 EPS15P42566 896 aa18.01■□□□□ 0.47
LINC00028-201ENST00000435497 SCNN1DP51172 638 aa18.01■□□□□ 0.47
LINC00028-201ENST00000435497 EIF6P56537 245 aaKnown RBP18.01■□□□□ 0.47
LINC00028-201ENST00000435497 NFE2L2Q16236 605 aa18.01■□□□□ 0.47
LINC00028-201ENST00000435497 KIF6Q6ZMV9 814 aa18.01■□□□□ 0.47
LINC00028-201ENST00000435497 CRAMP1Q96RY5 1269 aa18.01■□□□□ 0.47
LINC00028-201ENST00000435497 IBTKQ9P2D0 1353 aaPredicted RBP18.01■□□□□ 0.47
LINC00028-201ENST00000435497 TCERG1O14776 1098 aaKnown RBP18■□□□□ 0.47
LINC00028-201ENST00000435497 LBX1P52954 281 aa18■□□□□ 0.47
LINC00028-201ENST00000435497 GIGYF2Q6Y7W6 1299 aaKnown RBP18■□□□□ 0.47
LINC00028-201ENST00000435497 LRP10Q7Z4F1 713 aa18■□□□□ 0.47
LINC00028-201ENST00000435497 LARGE2Q8N3Y3 721 aa18■□□□□ 0.47
LINC00028-201ENST00000435497 AIDAQ96BJ3 306 aa18■□□□□ 0.47
LINC00028-201ENST00000435497 RBM17Q96I25 401 aaKnown RBP18■□□□□ 0.47
LINC00028-201ENST00000435497 DDX21Q9NR30 783 aaKnown RBP eCLIP18■□□□□ 0.47
LINC00028-201ENST00000435497 WDR33Q9C0J8 1336 aaKnown RBP17.98■□□□□ 0.47
LINC00028-201ENST00000435497 PPEF1O14829 653 aaPredicted RBP17.98■□□□□ 0.47
LINC00028-201ENST00000435497 NEFMP07197 916 aa17.98■□□□□ 0.47
LINC00028-201ENST00000435497 HSPA8P11142 646 aaKnown RBP17.98■□□□□ 0.47
LINC00028-201ENST00000435497 PDIA6Q15084 440 aa17.98■□□□□ 0.47
LINC00028-201ENST00000435497 GRIPAP1Q4V328 841 aa17.98■□□□□ 0.47
LINC00028-201ENST00000435497 SLC10A5Q5PT55 438 aa17.97■□□□□ 0.47
LINC00028-201ENST00000435497 ABT1Q9ULW3 272 aaKnown RBP17.97■□□□□ 0.47
LINC00028-201ENST00000435497 ERBB4Q15303 1308 aa17.97■□□□□ 0.47
LINC00028-201ENST00000435497 LMOD1P29536 600 aaPredicted RBP17.96■□□□□ 0.47
LINC00028-201ENST00000435497 CST9Q5W186 159 aa17.96■□□□□ 0.47
LINC00028-201ENST00000435497 PPP1R42Q7Z4L9 355 aa17.96■□□□□ 0.47
LINC00028-201ENST00000435497 TRAF5O00463 557 aa17.95■□□□□ 0.46
LINC00028-201ENST00000435497 PROSER3Q2NL68 480 aa17.95■□□□□ 0.46
LINC00028-201ENST00000435497 PARP10Q53GL7 1025 aa17.95■□□□□ 0.46
LINC00028-201ENST00000435497 USP50Q70EL3 339 aaPredicted RBP17.95■□□□□ 0.46
LINC00028-201ENST00000435497 NLRP3Q96P20 1036 aa17.95■□□□□ 0.46
LINC00028-201ENST00000435497 PPIP5K2O43314 1243 aa17.94■□□□□ 0.46
LINC00028-201ENST00000435497 ANXA1P04083 346 aa17.94■□□□□ 0.46
LINC00028-201ENST00000435497 EIF2S2P20042 333 aaKnown RBP17.94■□□□□ 0.46
LINC00028-201ENST00000435497 MAP2K1Q02750 393 aaPredicted RBP17.94■□□□□ 0.46
LINC00028-201ENST00000435497 AOC3Q16853 763 aa17.94■□□□□ 0.46
LINC00028-201ENST00000435497 NIM1KQ8IY84 436 aa17.94■□□□□ 0.46
LINC00028-201ENST00000435497 ATP6V0A2Q9Y487 856 aa17.94■□□□□ 0.46
LINC00028-201ENST00000435497 TRPM7Q96QT4 1865 aa17.93■□□□□ 0.46
LINC00028-201ENST00000435497 CXCL9Q07325 125 aa17.93■□□□□ 0.46
LINC00028-201ENST00000435497 CAPNS2Q96L46 248 aa17.93■□□□□ 0.46
LINC00028-201ENST00000435497 UTP14AQ9BVJ6 771 aaKnown RBP17.93■□□□□ 0.46
LINC00028-201ENST00000435497 RTFDC1Q9BY42 306 aaPredicted RBP17.93■□□□□ 0.46
LINC00028-201ENST00000435497 TSPYL4Q9UJ04 414 aa17.93■□□□□ 0.46
LINC00028-201ENST00000435497 ABCC4O15439 1325 aa17.93■□□□□ 0.46
LINC00028-201ENST00000435497 CYP4F22Q6NT55 531 aa17.92■□□□□ 0.46
LINC00028-201ENST00000435497 VPS33BQ9H267 617 aa17.92■□□□□ 0.46
LINC00028-201ENST00000435497 GPRC5DQ9NZD1 345 aa17.92■□□□□ 0.46
LINC00028-201ENST00000435497 PNNQ9H307 717 aaKnown RBP17.91■□□□□ 0.46
LINC00028-201ENST00000435497 ADARB2Q9NS39 739 aaKnown RBP17.91■□□□□ 0.46
LINC00028-201ENST00000435497 ZNRF3Q9ULT6 936 aa17.91■□□□□ 0.46
LINC00028-201ENST00000435497 HCLS1P14317 486 aaPredicted RBP17.9■□□□□ 0.46
LINC00028-201ENST00000435497 RIPK4P57078 832 aa17.9■□□□□ 0.46
LINC00028-201ENST00000435497 SP8Q8IXZ3 490 aa17.9■□□□□ 0.46
LINC00028-201ENST00000435497 ABHD8Q96I13 439 aa17.9■□□□□ 0.46
LINC00028-201ENST00000435497 GPR101Q96P66 508 aaPredicted RBP17.9■□□□□ 0.46
LINC00028-201ENST00000435497 TLL2Q9Y6L7 1015 aa17.9■□□□□ 0.46
LINC00028-201ENST00000435497 MAPK8IP3Q9UPT6 1336 aa17.9■□□□□ 0.46
LINC00028-201ENST00000435497 BBOX1O75936 387 aa17.89■□□□□ 0.45
LINC00028-201ENST00000435497 COPS6Q7L5N1 327 aa17.89■□□□□ 0.45
LINC00028-201ENST00000435497 NLRP10Q86W26 655 aa17.89■□□□□ 0.45
LINC00028-201ENST00000435497 PGAP2Q9UHJ9 254 aa17.89■□□□□ 0.45
LINC00028-201ENST00000435497 LAMB2P55268 1798 aa17.89■□□□□ 0.45
LINC00028-201ENST00000435497 TAF1P21675 1872 aa17.88■□□□□ 0.45
LINC00028-201ENST00000435497 THSD7BQ9C0I4 1608 aa17.88■□□□□ 0.45
LINC00028-201ENST00000435497 ECE1P42892 770 aa17.88■□□□□ 0.45
LINC00028-201ENST00000435497 GMPSP49915 693 aaPredicted RBP17.88■□□□□ 0.45
LINC00028-201ENST00000435497 HIRAP54198 1017 aaPredicted RBP17.88■□□□□ 0.45
LINC00028-201ENST00000435497 GRM1Q13255 1194 aa17.88■□□□□ 0.45
LINC00028-201ENST00000435497 PAXIP1Q6ZW49 1069 aaPredicted RBP17.88■□□□□ 0.45
LINC00028-201ENST00000435497 MPNDQ8N594 471 aa17.88■□□□□ 0.45
LINC00028-201ENST00000435497 SUPT20HQ8NEM7 779 aa17.88■□□□□ 0.45
LINC00028-201ENST00000435497 XAGE3Q8WTP9 111 aa17.88■□□□□ 0.45
LINC00028-201ENST00000435497 NECTIN2Q92692 538 aa17.88■□□□□ 0.45
LINC00028-201ENST00000435497 TMX4Q9H1E5 349 aaPredicted RBP17.88■□□□□ 0.45
LINC00028-201ENST00000435497 BABAM1Q9NWV8 329 aa17.88■□□□□ 0.45
LINC00028-201ENST00000435497 AOC2O75106 756 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms