RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 SKOR2Q2VWA4 1001 aaPredicted RBP18.71■□□□□ 0.59
SCARF1-203ENST00000434376 ZCRB1Q8TBF4 217 aaKnown RBP18.71■□□□□ 0.59
SCARF1-203ENST00000434376 C1orf167Q5SNV9 1468 aa18.71■□□□□ 0.59
SCARF1-203ENST00000434376 DDIT3P35638 169 aa18.71■□□□□ 0.59
SCARF1-203ENST00000434376 CEBPZQ03701 1054 aaKnown RBP18.71■□□□□ 0.59
SCARF1-203ENST00000434376 TAF7LQ5H9L4 462 aa18.71■□□□□ 0.59
SCARF1-203ENST00000434376 HSP90B1P14625 803 aaKnown RBP18.71■□□□□ 0.58
SCARF1-203ENST00000434376 BRINP3Q76B58 766 aa18.71■□□□□ 0.58
SCARF1-203ENST00000434376 DDX11Q96FC9 970 aa18.71■□□□□ 0.58
SCARF1-203ENST00000434376 FAM89AQ96GI7 184 aa18.71■□□□□ 0.58
SCARF1-203ENST00000434376 SMC3Q9UQE7 1217 aa18.71■□□□□ 0.58
SCARF1-203ENST00000434376 ZNF589Q86UQ0 364 aaPredicted RBP18.7■□□□□ 0.58
SCARF1-203ENST00000434376 RBM8AQ9Y5S9 174 aaKnown RBP18.7■□□□□ 0.58
SCARF1-203ENST00000434376 SALL3Q9BXA9 1300 aa18.7■□□□□ 0.58
SCARF1-203ENST00000434376 GOLIM4O00461 696 aa18.69■□□□□ 0.58
SCARF1-203ENST00000434376 PRIM1P49642 420 aaKnown RBP18.69■□□□□ 0.58
SCARF1-203ENST00000434376 ASAP1Q9ULH1 1129 aa18.69■□□□□ 0.58
SCARF1-203ENST00000434376 RGPD2P0DJD1 1756 aa18.69■□□□□ 0.58
SCARF1-203ENST00000434376 ACSBG1Q96GR2 724 aa18.69■□□□□ 0.58
SCARF1-203ENST00000434376 PUS3Q9BZE2 481 aaKnown RBP18.69■□□□□ 0.58
SCARF1-203ENST00000434376 PDRG1Q9NUG6 133 aa18.69■□□□□ 0.58
SCARF1-203ENST00000434376 GPT2Q8TD30 523 aa18.68■□□□□ 0.58
SCARF1-203ENST00000434376 SLAIN2Q9P270 581 aa18.68■□□□□ 0.58
SCARF1-203ENST00000434376 CNPY2Q9Y2B0 182 aa18.68■□□□□ 0.58
SCARF1-203ENST00000434376 LMBRD1Q9NUN5 540 aa18.68■□□□□ 0.58
SCARF1-203ENST00000434376 STAP2Q9UGK3 403 aa18.68■□□□□ 0.58
SCARF1-203ENST00000434376 NWD1Q149M9 1564 aa18.68■□□□□ 0.58
SCARF1-203ENST00000434376 VIRMAQ69YN4 1812 aaKnown RBP18.68■□□□□ 0.58
SCARF1-203ENST00000434376 ZKSCAN1P17029 563 aaPredicted RBP18.67■□□□□ 0.58
SCARF1-203ENST00000434376 KCNQ4P56696 695 aa18.67■□□□□ 0.58
SCARF1-203ENST00000434376 LRRC24Q50LG9 513 aa18.67■□□□□ 0.58
SCARF1-203ENST00000434376 DCAF5Q96JK2 942 aa18.67■□□□□ 0.58
SCARF1-203ENST00000434376 NBPF26B4DH59 902 aa18.67■□□□□ 0.58
SCARF1-203ENST00000434376 PTMAP06454 111 aaKnown RBP18.67■□□□□ 0.58
SCARF1-203ENST00000434376 CCDC173Q0VFZ6 552 aa18.67■□□□□ 0.58
SCARF1-203ENST00000434376 NBPF14Q5TI25 921 aa18.67■□□□□ 0.58
SCARF1-203ENST00000434376 NBPF10Q6P3W6 841 aaKnown RBP18.67■□□□□ 0.58
SCARF1-203ENST00000434376 ZSCAN30Q86W11 494 aa18.67■□□□□ 0.58
SCARF1-203ENST00000434376 NBPF15Q8N660 670 aa18.67■□□□□ 0.58
SCARF1-203ENST00000434376 BTG4Q9NY30 223 aa18.67■□□□□ 0.58
SCARF1-203ENST00000434376 ALDH1L1O75891 902 aa18.67■□□□□ 0.58
SCARF1-203ENST00000434376 METTL22Q9BUU2 404 aaPredicted RBP18.67■□□□□ 0.58
SCARF1-203ENST00000434376 ZSCAN23Q3MJ62 389 aa18.66■□□□□ 0.58
SCARF1-203ENST00000434376 RUFY2Q8WXA3 655 aa18.66■□□□□ 0.58
SCARF1-203ENST00000434376 LSG1Q9H089 658 aaKnown RBP18.66■□□□□ 0.58
SCARF1-203ENST00000434376 DBNLQ9UJU6 430 aaKnown RBP18.66■□□□□ 0.58
SCARF1-203ENST00000434376 TBC1D2BQ9UPU7 963 aa18.66■□□□□ 0.58
SCARF1-203ENST00000434376 HAND2P61296 217 aa18.66■□□□□ 0.58
SCARF1-203ENST00000434376 RUFY3Q7L099 469 aa18.66■□□□□ 0.58
SCARF1-203ENST00000434376 MEGF6O75095 1541 aa18.66■□□□□ 0.58
SCARF1-203ENST00000434376 SMIM5Q71RC9 77 aa18.66■□□□□ 0.58
SCARF1-203ENST00000434376 HELBQ8NG08 1087 aaPredicted RBP18.66■□□□□ 0.58
SCARF1-203ENST00000434376 TMEM63CQ9P1W3 806 aa18.66■□□□□ 0.58
SCARF1-203ENST00000434376 TFIP11Q9UBB9 837 aaKnown RBP18.66■□□□□ 0.58
SCARF1-203ENST00000434376 SNAP23O00161 211 aa18.65■□□□□ 0.58
SCARF1-203ENST00000434376 HSPA4P34932 840 aa18.65■□□□□ 0.58
SCARF1-203ENST00000434376 DNTTIP2Q5QJE6 756 aaKnown RBP18.65■□□□□ 0.58
SCARF1-203ENST00000434376 DNAJC10Q8IXB1 793 aa18.65■□□□□ 0.58
SCARF1-203ENST00000434376 NALCNQ8IZF0 1738 aa18.65■□□□□ 0.58
SCARF1-203ENST00000434376 TPM2P07951 284 aa18.65■□□□□ 0.58
SCARF1-203ENST00000434376 FBXW7Q969H0 707 aa18.65■□□□□ 0.58
SCARF1-203ENST00000434376 TOPAZ1Q8N9V7 1692 aa18.65■□□□□ 0.58
SCARF1-203ENST00000434376 PIP4K2BP78356 416 aa18.64■□□□□ 0.58
SCARF1-203ENST00000434376 PI16Q6UXB8 463 aa18.64■□□□□ 0.58
SCARF1-203ENST00000434376 A0A0G2JLW4 131 aa18.64■□□□□ 0.57
SCARF1-203ENST00000434376 CYP46A1Q9Y6A2 500 aa18.64■□□□□ 0.57
SCARF1-203ENST00000434376 GJB2P29033 226 aa18.64■□□□□ 0.57
SCARF1-203ENST00000434376 GUCY1B3Q02153 619 aa18.64■□□□□ 0.57
SCARF1-203ENST00000434376 WASHC4Q2M389 1173 aa18.64■□□□□ 0.57
SCARF1-203ENST00000434376 BABAM1Q9NWV8 329 aa18.64■□□□□ 0.57
SCARF1-203ENST00000434376 RAD50Q92878 1312 aa18.63■□□□□ 0.57
SCARF1-203ENST00000434376 HOXB7P09629 217 aa18.63■□□□□ 0.57
SCARF1-203ENST00000434376 CHMP4AQ9BY43 222 aa18.63■□□□□ 0.57
SCARF1-203ENST00000434376 TMOD3Q9NYL9 352 aa18.63■□□□□ 0.57
SCARF1-203ENST00000434376 ERC1Q8IUD2 1116 aa18.62■□□□□ 0.57
SCARF1-203ENST00000434376 RBSNQ9H1K0 784 aa18.62■□□□□ 0.57
SCARF1-203ENST00000434376 CWC22Q9HCG8 908 aaKnown RBP18.62■□□□□ 0.57
SCARF1-203ENST00000434376 ISY1Q9ULR0 285 aaKnown RBP18.62■□□□□ 0.57
SCARF1-203ENST00000434376 CREB3L3Q68CJ9 461 aa18.62■□□□□ 0.57
SCARF1-203ENST00000434376 USP48Q86UV5 1035 aa18.62■□□□□ 0.57
SCARF1-203ENST00000434376 EVI5LQ96CN4 794 aa18.62■□□□□ 0.57
SCARF1-203ENST00000434376 CCT2P78371 535 aaKnown RBP18.61■□□□□ 0.57
SCARF1-203ENST00000434376 DNM1Q05193 864 aaKnown RBP18.61■□□□□ 0.57
SCARF1-203ENST00000434376 PTPN12Q05209 780 aaKnown RBP18.61■□□□□ 0.57
SCARF1-203ENST00000434376 KDM6AO15550 1401 aaPredicted RBP18.61■□□□□ 0.57
SCARF1-203ENST00000434376 KLHL40Q2TBA0 621 aa18.61■□□□□ 0.57
SCARF1-203ENST00000434376 CHMP4CQ96CF2 233 aa18.61■□□□□ 0.57
SCARF1-203ENST00000434376 LIMCH1Q9UPQ0 1083 aa18.61■□□□□ 0.57
SCARF1-203ENST00000434376 LTN1O94822 1766 aa18.61■□□□□ 0.57
SCARF1-203ENST00000434376 SPATA31A3Q5VYP0 1347 aa18.61■□□□□ 0.57
SCARF1-203ENST00000434376 IL2RBP14784 551 aa18.61■□□□□ 0.57
SCARF1-203ENST00000434376 SYT1P21579 422 aa18.61■□□□□ 0.57
SCARF1-203ENST00000434376 CAMK4Q16566 473 aa18.61■□□□□ 0.57
SCARF1-203ENST00000434376 VPS53Q5VIR6 699 aa18.61■□□□□ 0.57
SCARF1-203ENST00000434376 TNNI3KQ59H18 835 aa18.6■□□□□ 0.57
SCARF1-203ENST00000434376 FPGT-TNNI3KV9GXZ4 949 aa18.6■□□□□ 0.57
SCARF1-203ENST00000434376 ME3Q16798 604 aa18.6■□□□□ 0.57
SCARF1-203ENST00000434376 BLOC1S2Q6QNY1 142 aa18.6■□□□□ 0.57
SCARF1-203ENST00000434376 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.6■□□□□ 0.57
SCARF1-203ENST00000434376 PRDM10Q9NQV6 1147 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms