RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 IBTKQ9P2D0 1353 aaPredicted RBP17.32■□□□□ 0.36
EDEM1-202ENST00000434243 SYNE4Q8N205 404 aa17.32■□□□□ 0.36
EDEM1-202ENST00000434243 MBIPQ9NS73 344 aa17.32■□□□□ 0.36
EDEM1-202ENST00000434243 HTRA3P83110 453 aa17.31■□□□□ 0.36
EDEM1-202ENST00000434243 CALD1Q05682 793 aaKnown RBP17.31■□□□□ 0.36
EDEM1-202ENST00000434243 DUSP27Q5VZP5 1158 aa17.31■□□□□ 0.36
EDEM1-202ENST00000434243 ZNF428Q96B54 188 aa17.31■□□□□ 0.36
EDEM1-202ENST00000434243 POTECB2RU33 542 aa17.3■□□□□ 0.36
EDEM1-202ENST00000434243 HOXB7P09629 217 aa17.3■□□□□ 0.36
EDEM1-202ENST00000434243 HOXA10P31260 410 aaPredicted RBP17.3■□□□□ 0.36
EDEM1-202ENST00000434243 TCIRG1Q13488 830 aa17.3■□□□□ 0.36
EDEM1-202ENST00000434243 C3orf67Q6ZVT6 689 aa17.3■□□□□ 0.36
EDEM1-202ENST00000434243 TMX4Q9H1E5 349 aaPredicted RBP17.3■□□□□ 0.36
EDEM1-202ENST00000434243 DBF4Q9UBU7 674 aaPredicted RBP17.3■□□□□ 0.36
EDEM1-202ENST00000434243 TRMT112Q9UI30 125 aaKnown RBP17.3■□□□□ 0.36
EDEM1-202ENST00000434243 ELL2O00472 640 aaPredicted RBP17.29■□□□□ 0.36
EDEM1-202ENST00000434243 PPEF1O14829 653 aaPredicted RBP17.29■□□□□ 0.36
EDEM1-202ENST00000434243 IARSP41252 1262 aaKnown RBP17.29■□□□□ 0.36
EDEM1-202ENST00000434243 GNAI1P63096 354 aa17.29■□□□□ 0.36
EDEM1-202ENST00000434243 CC2D2BQ6DHV5 1058 aa17.29■□□□□ 0.36
EDEM1-202ENST00000434243 NLRP10Q86W26 655 aa17.29■□□□□ 0.36
EDEM1-202ENST00000434243 CRAMP1Q96RY5 1269 aa17.29■□□□□ 0.36
EDEM1-202ENST00000434243 TNRC6CQ9HCJ0 1690 aaKnown RBP17.29■□□□□ 0.36
EDEM1-202ENST00000434243 TIAM2Q8IVF5 1701 aa17.28■□□□□ 0.36
EDEM1-202ENST00000434243 HCLS1P14317 486 aaPredicted RBP17.28■□□□□ 0.36
EDEM1-202ENST00000434243 CCDC184Q52MB2 194 aa17.28■□□□□ 0.36
EDEM1-202ENST00000434243 SLC10A5Q5PT55 438 aa17.28■□□□□ 0.36
EDEM1-202ENST00000434243 ANKRD13DQ6ZTN6 518 aa17.28■□□□□ 0.36
EDEM1-202ENST00000434243 IFT57Q9NWB7 429 aa17.28■□□□□ 0.36
EDEM1-202ENST00000434243 FER1L6Q2WGJ9 1857 aa17.28■□□□□ 0.36
EDEM1-202ENST00000434243 NUP98P52948 1817 aa17.28■□□□□ 0.36
EDEM1-202ENST00000434243 CACNA1SQ13698 1873 aa17.27■□□□□ 0.36
EDEM1-202ENST00000434243 PLBD2Q8NHP8 589 aa17.27■□□□□ 0.36
EDEM1-202ENST00000434243 JDP2Q8WYK2 163 aa17.27■□□□□ 0.36
EDEM1-202ENST00000434243 HYPKQ9NX55 129 aa17.27■□□□□ 0.36
EDEM1-202ENST00000434243 RIC1Q4ADV7 1423 aa17.27■□□□□ 0.35
EDEM1-202ENST00000434243 SH3TC1Q8TE82 1336 aa17.26■□□□□ 0.35
EDEM1-202ENST00000434243 IQCA1LA6NCM1 817 aa17.26■□□□□ 0.35
EDEM1-202ENST00000434243 ZNF316A6NFI3 1004 aaPredicted RBP17.26■□□□□ 0.35
EDEM1-202ENST00000434243 ZNF853P0CG23 659 aa17.26■□□□□ 0.35
EDEM1-202ENST00000434243 PSMD1Q99460 953 aa17.26■□□□□ 0.35
EDEM1-202ENST00000434243 RNF123Q5XPI4 1314 aa17.25■□□□□ 0.35
EDEM1-202ENST00000434243 ZNF541Q9H0D2 1346 aa17.25■□□□□ 0.35
EDEM1-202ENST00000434243 CCDC88AQ3V6T2 1871 aa17.25■□□□□ 0.35
EDEM1-202ENST00000434243 ATP5J2-PTCD1G3V325 749 aa17.25■□□□□ 0.35
EDEM1-202ENST00000434243 ANP32CO43423 234 aa17.25■□□□□ 0.35
EDEM1-202ENST00000434243 GRIPAP1Q4V328 841 aa17.25■□□□□ 0.35
EDEM1-202ENST00000434243 DNAJC5GQ8N7S2 189 aa17.25■□□□□ 0.35
EDEM1-202ENST00000434243 ARFGEF2Q9Y6D5 1785 aa17.25■□□□□ 0.35
EDEM1-202ENST00000434243 DDX46Q7L014 1031 aaKnown RBP17.24■□□□□ 0.35
EDEM1-202ENST00000434243 RIC3Q7Z5B4 369 aa17.24■□□□□ 0.35
EDEM1-202ENST00000434243 SLC51AQ86UW1 340 aa17.24■□□□□ 0.35
EDEM1-202ENST00000434243 LARGE2Q8N3Y3 721 aa17.24■□□□□ 0.35
EDEM1-202ENST00000434243 ABCC4O15439 1325 aa17.23■□□□□ 0.35
EDEM1-202ENST00000434243 FZD9O00144 591 aa17.23■□□□□ 0.35
EDEM1-202ENST00000434243 POTEIP0CG38 1075 aa17.23■□□□□ 0.35
EDEM1-202ENST00000434243 POTEJP0CG39 1038 aa17.23■□□□□ 0.35
EDEM1-202ENST00000434243 EIF6P56537 245 aaKnown RBP17.23■□□□□ 0.35
EDEM1-202ENST00000434243 GOLGA2Q08379 1002 aa17.23■□□□□ 0.35
EDEM1-202ENST00000434243 EAPPQ56P03 285 aaPredicted RBP17.23■□□□□ 0.35
EDEM1-202ENST00000434243 RTL5Q5HYW3 569 aaPredicted RBP17.23■□□□□ 0.35
EDEM1-202ENST00000434243 CHADLQ6NUI6 762 aa17.23■□□□□ 0.35
EDEM1-202ENST00000434243 MRS2Q9HD23 443 aa17.23■□□□□ 0.35
EDEM1-202ENST00000434243 ATP6V0A2Q9Y487 856 aa17.23■□□□□ 0.35
EDEM1-202ENST00000434243 GJA3Q9Y6H8 435 aa17.23■□□□□ 0.35
EDEM1-202ENST00000434243 WDR90Q96KV7 1748 aa17.22■□□□□ 0.35
EDEM1-202ENST00000434243 BBOX1O75936 387 aa17.22■□□□□ 0.35
EDEM1-202ENST00000434243 C8orf58Q8NAV2 365 aa17.22■□□□□ 0.35
EDEM1-202ENST00000434243 KLRG1Q96E93 195 aa17.22■□□□□ 0.35
EDEM1-202ENST00000434243 FAM89AQ96GI7 184 aa17.22■□□□□ 0.35
EDEM1-202ENST00000434243 L3MBTL3Q96JM7 780 aaPredicted RBP17.22■□□□□ 0.35
EDEM1-202ENST00000434243 TAF1DQ9H5J8 278 aaPredicted RBP17.22■□□□□ 0.35
EDEM1-202ENST00000434243 PHAXQ9H814 394 aaKnown RBP17.22■□□□□ 0.35
EDEM1-202ENST00000434243 HACL1Q9UJ83 578 aa17.22■□□□□ 0.35
EDEM1-202ENST00000434243 PPIP5K2O43314 1243 aa17.21■□□□□ 0.35
EDEM1-202ENST00000434243 NIM1KQ8IY84 436 aa17.21■□□□□ 0.35
EDEM1-202ENST00000434243 ISCA1Q9BUE6 129 aa17.21■□□□□ 0.35
EDEM1-202ENST00000434243 CLEC11AQ9Y240 323 aa17.21■□□□□ 0.35
EDEM1-202ENST00000434243 GRAPQ13588 217 aa17.2■□□□□ 0.34
EDEM1-202ENST00000434243 CCDC30Q5VVM6 783 aa17.2■□□□□ 0.34
EDEM1-202ENST00000434243 DPP8Q6V1X1 898 aaPredicted RBP17.2■□□□□ 0.34
EDEM1-202ENST00000434243 GPC2Q8N158 579 aa17.2■□□□□ 0.34
EDEM1-202ENST00000434243 SUPT20HQ8NEM7 779 aa17.2■□□□□ 0.34
EDEM1-202ENST00000434243 GRAPLQ8TC17 118 aaPredicted RBP17.2■□□□□ 0.34
EDEM1-202ENST00000434243 TSR2Q969E8 191 aaKnown RBP17.2■□□□□ 0.34
EDEM1-202ENST00000434243 CHMP4AQ9BY43 222 aa17.2■□□□□ 0.34
EDEM1-202ENST00000434243 EPHX2P34913 555 aa17.19■□□□□ 0.34
EDEM1-202ENST00000434243 AOC3Q16853 763 aa17.19■□□□□ 0.34
EDEM1-202ENST00000434243 LDHDQ86WU2 507 aa17.19■□□□□ 0.34
EDEM1-202ENST00000434243 SP8Q8IXZ3 490 aa17.19■□□□□ 0.34
EDEM1-202ENST00000434243 MYD88Q99836 296 aa17.19■□□□□ 0.34
EDEM1-202ENST00000434243 SALL2Q9Y467 1007 aaPredicted RBP17.19■□□□□ 0.34
EDEM1-202ENST00000434243 SNED1Q8TER0 1413 aa17.19■□□□□ 0.34
EDEM1-202ENST00000434243 DICER1Q9UPY3 1922 aaKnown RBP17.19■□□□□ 0.34
EDEM1-202ENST00000434243 DDX58O95786 925 aaKnown RBP17.18■□□□□ 0.34
EDEM1-202ENST00000434243 LMOD1P29536 600 aaPredicted RBP17.18■□□□□ 0.34
EDEM1-202ENST00000434243 WWC1Q8IX03 1113 aa17.18■□□□□ 0.34
EDEM1-202ENST00000434243 MPNDQ8N594 471 aa17.18■□□□□ 0.34
EDEM1-202ENST00000434243 TSPYL6Q8N831 410 aa17.18■□□□□ 0.34
EDEM1-202ENST00000434243 IRS4O14654 1257 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms