RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 SALL2Q9Y467 1007 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC4-202ENST00000434101 DICER1Q9UPY3 1922 aaKnown RBP17.04■□□□□ 0.32
TRAPPC4-202ENST00000434101 C21orf2O43822 256 aa17.04■□□□□ 0.32
TRAPPC4-202ENST00000434101 ALDH1B1P30837 517 aa17.04■□□□□ 0.32
TRAPPC4-202ENST00000434101 ZNF219Q9P2Y4 722 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC4-202ENST00000434101 LMNB1P20700 586 aa17.03■□□□□ 0.32
TRAPPC4-202ENST00000434101 RASSF7Q02833 373 aa17.03■□□□□ 0.32
TRAPPC4-202ENST00000434101 GOLGA2Q08379 1002 aa17.03■□□□□ 0.32
TRAPPC4-202ENST00000434101 CRY2Q49AN0 593 aa17.03■□□□□ 0.32
TRAPPC4-202ENST00000434101 ZNF526Q8TF50 670 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC4-202ENST00000434101 NLRP10Q86W26 655 aa17.02■□□□□ 0.32
TRAPPC4-202ENST00000434101 TSPYL6Q8N831 410 aa17.02■□□□□ 0.32
TRAPPC4-202ENST00000434101 RPGRQ92834 1020 aaKnown RBP17.02■□□□□ 0.32
TRAPPC4-202ENST00000434101 ZC3H4Q9UPT8 1303 aaKnown RBP17.01■□□□□ 0.31
TRAPPC4-202ENST00000434101 NFKBIEO00221 500 aa17.01■□□□□ 0.31
TRAPPC4-202ENST00000434101 TWISTNBQ3B726 338 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC4-202ENST00000434101 SLC10A5Q5PT55 438 aa17.01■□□□□ 0.31
TRAPPC4-202ENST00000434101 RIC3Q7Z5B4 369 aa17.01■□□□□ 0.31
TRAPPC4-202ENST00000434101 NLRP3Q96P20 1036 aa17.01■□□□□ 0.31
TRAPPC4-202ENST00000434101 STK31Q9BXU1 1019 aa17.01■□□□□ 0.31
TRAPPC4-202ENST00000434101 TRMT112Q9UI30 125 aaKnown RBP17.01■□□□□ 0.31
TRAPPC4-202ENST00000434101 LTBP3Q9NS15 1303 aa17■□□□□ 0.31
TRAPPC4-202ENST00000434101 FANCIQ9NVI1 1328 aa17■□□□□ 0.31
TRAPPC4-202ENST00000434101 LAMB2P55268 1798 aa17■□□□□ 0.31
TRAPPC4-202ENST00000434101 DDX58O95786 925 aaKnown RBP17■□□□□ 0.31
TRAPPC4-202ENST00000434101 CCDC93Q567U6 631 aa17■□□□□ 0.31
TRAPPC4-202ENST00000434101 TIAM2Q8IVF5 1701 aa17■□□□□ 0.31
TRAPPC4-202ENST00000434101 RBM17Q96I25 401 aaKnown RBP17■□□□□ 0.31
TRAPPC4-202ENST00000434101 TAOK3Q9H2K8 898 aa17■□□□□ 0.31
TRAPPC4-202ENST00000434101 PHAXQ9H814 394 aaKnown RBP17■□□□□ 0.31
TRAPPC4-202ENST00000434101 SH3TC1Q8TE82 1336 aa16.99■□□□□ 0.31
TRAPPC4-202ENST00000434101 HOXA10P31260 410 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC4-202ENST00000434101 C7orf43Q8WVR3 580 aa16.99■□□□□ 0.31
TRAPPC4-202ENST00000434101 ISCA1Q9BUE6 129 aa16.99■□□□□ 0.31
TRAPPC4-202ENST00000434101 MYH16Q9H6N6 1097 aa16.99■□□□□ 0.31
TRAPPC4-202ENST00000434101 CCER2I3L3R5 266 aa16.98■□□□□ 0.31
TRAPPC4-202ENST00000434101 TRIM28Q13263 835 aaKnown RBP16.98■□□□□ 0.31
TRAPPC4-202ENST00000434101 CRAMP1Q96RY5 1269 aa16.98■□□□□ 0.31
TRAPPC4-202ENST00000434101 KDM2BQ8NHM5 1336 aa16.97■□□□□ 0.31
TRAPPC4-202ENST00000434101 ATP5J2-PTCD1G3V325 749 aa16.97■□□□□ 0.31
TRAPPC4-202ENST00000434101 C1QTNF8P60827 252 aa16.97■□□□□ 0.31
TRAPPC4-202ENST00000434101 CC2D2BQ6DHV5 1058 aa16.97■□□□□ 0.31
TRAPPC4-202ENST00000434101 RTKN2Q8IZC4 609 aa16.97■□□□□ 0.31
TRAPPC4-202ENST00000434101 DDX60Q8IY21 1712 aaKnown RBP16.96■□□□□ 0.3
TRAPPC4-202ENST00000434101 HCLS1P14317 486 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC4-202ENST00000434101 PRELPP51888 382 aa16.95■□□□□ 0.3
TRAPPC4-202ENST00000434101 GRIPAP1Q4V328 841 aa16.95■□□□□ 0.3
TRAPPC4-202ENST00000434101 C3orf67Q6ZVT6 689 aa16.95■□□□□ 0.3
TRAPPC4-202ENST00000434101 TMX4Q9H1E5 349 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC4-202ENST00000434101 SLC4A2P04920 1241 aa16.94■□□□□ 0.3
TRAPPC4-202ENST00000434101 HSP90B1P14625 803 aaKnown RBP16.94■□□□□ 0.3
TRAPPC4-202ENST00000434101 FKBP4Q02790 459 aaKnown RBP eCLIP16.94■□□□□ 0.3
TRAPPC4-202ENST00000434101 EXOSC9Q06265 439 aaKnown RBP16.94■□□□□ 0.3
TRAPPC4-202ENST00000434101 KSR2Q6VAB6 950 aa16.94■□□□□ 0.3
TRAPPC4-202ENST00000434101 CCDC191Q8NCU4 936 aa16.94■□□□□ 0.3
TRAPPC4-202ENST00000434101 MYD88Q99836 296 aa16.94■□□□□ 0.3
TRAPPC4-202ENST00000434101 METTL22Q9BUU2 404 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC4-202ENST00000434101 TCERG1O14776 1098 aaKnown RBP16.93■□□□□ 0.3
TRAPPC4-202ENST00000434101 PPEF1O14829 653 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC4-202ENST00000434101 VAMP4O75379 141 aa16.93■□□□□ 0.3
TRAPPC4-202ENST00000434101 DDX46Q7L014 1031 aaKnown RBP16.93■□□□□ 0.3
TRAPPC4-202ENST00000434101 SYNE4Q8N205 404 aa16.93■□□□□ 0.3
TRAPPC4-202ENST00000434101 FAM89AQ96GI7 184 aa16.93■□□□□ 0.3
TRAPPC4-202ENST00000434101 MAP3K2Q9Y2U5 619 aa16.93■□□□□ 0.3
TRAPPC4-202ENST00000434101 KIF3CO14782 793 aa16.92■□□□□ 0.3
TRAPPC4-202ENST00000434101 NEXNQ0ZGT2 675 aa16.92■□□□□ 0.3
TRAPPC4-202ENST00000434101 DPY19L2Q6NUT2 758 aa16.92■□□□□ 0.3
TRAPPC4-202ENST00000434101 ZBTB38Q8NAP3 1195 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC4-202ENST00000434101 NMRK2Q9NPI5 230 aa16.92■□□□□ 0.3
TRAPPC4-202ENST00000434101 SPINK5Q9NQ38 1064 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC4-202ENST00000434101 CWC25Q9NXE8 425 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC4-202ENST00000434101 ZNF521Q96K83 1311 aa16.92■□□□□ 0.3
TRAPPC4-202ENST00000434101 TAF1P21675 1872 aa16.91■□□□□ 0.3
TRAPPC4-202ENST00000434101 PI4KAP2A4QPH2 592 aa16.91■□□□□ 0.3
TRAPPC4-202ENST00000434101 GLTPD2A6NH11 291 aa16.91■□□□□ 0.3
TRAPPC4-202ENST00000434101 BBOX1O75936 387 aa16.91■□□□□ 0.3
TRAPPC4-202ENST00000434101 OLFM4Q6UX06 510 aa16.91■□□□□ 0.3
TRAPPC4-202ENST00000434101 PI4KAP1Q8N8J0 262 aa16.91■□□□□ 0.3
TRAPPC4-202ENST00000434101 ZNF428Q96B54 188 aa16.91■□□□□ 0.3
TRAPPC4-202ENST00000434101 PSMD1Q99460 953 aa16.91■□□□□ 0.3
TRAPPC4-202ENST00000434101 ABCC4O15439 1325 aa16.91■□□□□ 0.3
TRAPPC4-202ENST00000434101 MYH3P11055 1940 aa16.9■□□□□ 0.3
TRAPPC4-202ENST00000434101 IRS4O14654 1257 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC4-202ENST00000434101 FLIIQ13045 1269 aa16.9■□□□□ 0.3
TRAPPC4-202ENST00000434101 C16orf71Q8IYS4 520 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC4-202ENST00000434101 SNED1Q8TER0 1413 aa16.89■□□□□ 0.29
TRAPPC4-202ENST00000434101 PCCAP05165 728 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC4-202ENST00000434101 IARSP41252 1262 aaKnown RBP16.89■□□□□ 0.29
TRAPPC4-202ENST00000434101 GRAPQ13588 217 aa16.89■□□□□ 0.29
TRAPPC4-202ENST00000434101 SF3B3Q15393 1217 aaKnown RBP16.89■□□□□ 0.29
TRAPPC4-202ENST00000434101 RTL5Q5HYW3 569 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC4-202ENST00000434101 G2E3Q7L622 706 aa16.89■□□□□ 0.29
TRAPPC4-202ENST00000434101 TMC4Q7Z404 712 aa16.89■□□□□ 0.29
TRAPPC4-202ENST00000434101 GRAPLQ8TC17 118 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC4-202ENST00000434101 ZNF277Q9NRM2 450 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC4-202ENST00000434101 ATP6V0A2Q9Y487 856 aa16.89■□□□□ 0.29
TRAPPC4-202ENST00000434101 E9PSI1 815 aa16.88■□□□□ 0.29
TRAPPC4-202ENST00000434101 TOMM70O94826 608 aa16.88■□□□□ 0.29
TRAPPC4-202ENST00000434101 FKBP5Q13451 457 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC4-202ENST00000434101 RRAGCQ9HB90 399 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms