RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 CREB3L3Q68CJ9 461 aa13.58□□□□□ -0.24
HMGCS1-202ENST00000433297 BLOC1S2Q6QNY1 142 aa13.58□□□□□ -0.24
HMGCS1-202ENST00000433297 FAM227BQ96M60 508 aa13.58□□□□□ -0.24
HMGCS1-202ENST00000433297 LMTK2Q8IWU2 1503 aa13.58□□□□□ -0.24
HMGCS1-202ENST00000433297 DLG5Q8TDM6 1919 aa13.58□□□□□ -0.24
HMGCS1-202ENST00000433297 JAK2O60674 1132 aa13.58□□□□□ -0.24
HMGCS1-202ENST00000433297 CAPN2P17655 700 aa13.58□□□□□ -0.24
HMGCS1-202ENST00000433297 ARHGAP29Q52LW3 1261 aa13.58□□□□□ -0.24
HMGCS1-202ENST00000433297 NYAP1Q6ZVC0 841 aa13.58□□□□□ -0.24
HMGCS1-202ENST00000433297 AOX1Q06278 1338 aa13.58□□□□□ -0.24
HMGCS1-202ENST00000433297 GLRX3O76003 335 aaKnown RBP13.58□□□□□ -0.24
HMGCS1-202ENST00000433297 HSP90B1P14625 803 aaKnown RBP13.58□□□□□ -0.24
HMGCS1-202ENST00000433297 TNNT3P45378 269 aaPredicted RBP13.58□□□□□ -0.24
HMGCS1-202ENST00000433297 CLASRPQ8N2M8 674 aaKnown RBP13.58□□□□□ -0.24
HMGCS1-202ENST00000433297 NEK11Q8NG66 645 aa13.58□□□□□ -0.24
HMGCS1-202ENST00000433297 ELP1O95163 1332 aa13.58□□□□□ -0.24
HMGCS1-202ENST00000433297 CDK12Q9NYV4 1490 aaPredicted RBP13.57□□□□□ -0.24
HMGCS1-202ENST00000433297 IFIT2P09913 472 aaKnown RBP13.57□□□□□ -0.24
HMGCS1-202ENST00000433297 CERS3Q8IU89 383 aa13.57□□□□□ -0.24
HMGCS1-202ENST00000433297 CCDC61Q9Y6R9 512 aa13.57□□□□□ -0.24
HMGCS1-202ENST00000433297 ASXL2Q76L83 1435 aa13.57□□□□□ -0.24
HMGCS1-202ENST00000433297 ANKRD26Q9UPS8 1709 aa13.57□□□□□ -0.24
HMGCS1-202ENST00000433297 NEMFO60524 1076 aa13.56□□□□□ -0.24
HMGCS1-202ENST00000433297 SMC2O95347 1197 aa13.56□□□□□ -0.24
HMGCS1-202ENST00000433297 CLCN6P51797 869 aa13.56□□□□□ -0.24
HMGCS1-202ENST00000433297 AOPEPQ8N6M6 819 aa13.56□□□□□ -0.24
HMGCS1-202ENST00000433297 FTOQ9C0B1 505 aaKnown RBP eCLIP13.56□□□□□ -0.24
HMGCS1-202ENST00000433297 TTC21AQ8NDW8 1320 aa13.56□□□□□ -0.24
HMGCS1-202ENST00000433297 CCZ1BP86790 482 aa13.56□□□□□ -0.24
HMGCS1-202ENST00000433297 CCZ1P86791 482 aaPredicted RBP13.56□□□□□ -0.24
HMGCS1-202ENST00000433297 IQCB1Q15051 598 aa13.56□□□□□ -0.24
HMGCS1-202ENST00000433297 TAF6LQ9Y6J9 622 aa13.56□□□□□ -0.24
HMGCS1-202ENST00000433297 CHD1O14646 1710 aa13.56□□□□□ -0.24
HMGCS1-202ENST00000433297 PSMA5P28066 241 aa13.56□□□□□ -0.24
HMGCS1-202ENST00000433297 HDGFL1Q5TGJ6 251 aa13.56□□□□□ -0.24
HMGCS1-202ENST00000433297 CCAR1Q8IX12 1150 aaKnown RBP13.56□□□□□ -0.24
HMGCS1-202ENST00000433297 FAM177A1Q8N128 213 aaPredicted RBP13.56□□□□□ -0.24
HMGCS1-202ENST00000433297 EDC4Q6P2E9 1401 aaKnown RBP13.55□□□□□ -0.24
HMGCS1-202ENST00000433297 NECTIN1Q15223 517 aa13.55□□□□□ -0.24
HMGCS1-202ENST00000433297 TAF7Q15545 349 aaPredicted RBP13.55□□□□□ -0.24
HMGCS1-202ENST00000433297 BRF1Q92994 677 aa13.55□□□□□ -0.24
HMGCS1-202ENST00000433297 ZFP91Q96JP5 570 aaPredicted RBP13.55□□□□□ -0.24
HMGCS1-202ENST00000433297 PA2G4Q9UQ80 394 aaKnown RBP13.55□□□□□ -0.24
HMGCS1-202ENST00000433297 MAP3K19Q56UN5 1328 aa13.55□□□□□ -0.24
HMGCS1-202ENST00000433297 ANXA1P04083 346 aa13.55□□□□□ -0.24
HMGCS1-202ENST00000433297 MRFAP1L1Q96HT8 127 aa13.55□□□□□ -0.24
HMGCS1-202ENST00000433297 KIDINS220Q9ULH0 1771 aa13.55□□□□□ -0.24
HMGCS1-202ENST00000433297 CRB1P82279 1406 aa13.55□□□□□ -0.24
HMGCS1-202ENST00000433297 AATKQ6ZMQ8 1374 aa13.55□□□□□ -0.24
HMGCS1-202ENST00000433297 ZRSR1Q15695 479 aaKnown RBP13.55□□□□□ -0.24
HMGCS1-202ENST00000433297 STX1AQ16623 288 aa13.55□□□□□ -0.24
HMGCS1-202ENST00000433297 ZCCHC17Q9NP64 241 aaKnown RBP13.55□□□□□ -0.24
HMGCS1-202ENST00000433297 SLC27A2O14975 620 aa13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 CYP2C19P33261 490 aa13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 NMIQ13287 307 aaPredicted RBP13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 TEX35Q5T0J7 233 aa13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 TMCO3Q6UWJ1 677 aa13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 UBXN4Q92575 508 aa13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 TM6SF1Q9BZW5 370 aa13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 KIF20BQ96Q89 1820 aa13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 KINO60870 393 aaKnown RBP13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 CCDC73Q6ZRK6 1079 aa13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 TMC6Q7Z403 805 aa13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 AACSQ86V21 672 aa13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 LRRC2Q9BYS8 371 aa13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 ECHDC1Q9NTX5 307 aa13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 DNAI1Q9UI46 699 aa13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 TAOK2Q9UL54 1235 aa13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 SEC31AO94979 1220 aaKnown RBP13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 PNMA6AP0CW24 399 aaPredicted RBP13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 CDC25BP30305 580 aa13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 KLHL34Q8N239 644 aa13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 MNS1Q8NEH6 495 aa13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 SDF4Q9BRK5 362 aa13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 CCDC8Q9H0W5 538 aaPredicted RBP13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 FHOD1Q9Y613 1164 aa13.54□□□□□ -0.24
HMGCS1-202ENST00000433297 ARAP3Q8WWN8 1544 aa13.53□□□□□ -0.24
HMGCS1-202ENST00000433297 EPC1Q9H2F5 836 aa13.53□□□□□ -0.24
HMGCS1-202ENST00000433297 GUCY1B3Q02153 619 aa13.53□□□□□ -0.24
HMGCS1-202ENST00000433297 RBM43Q6ZSC3 357 aaKnown RBP13.53□□□□□ -0.24
HMGCS1-202ENST00000433297 LTV1Q96GA3 475 aaPredicted RBP13.53□□□□□ -0.24
HMGCS1-202ENST00000433297 GPATCH3Q96I76 525 aa13.53□□□□□ -0.24
HMGCS1-202ENST00000433297 BOLA2Q9H3K6 86 aa13.53□□□□□ -0.24
HMGCS1-202ENST00000433297 TMX1Q9H3N1 280 aa13.53□□□□□ -0.24
HMGCS1-202ENST00000433297 ATP7BP35670 1465 aa13.53□□□□□ -0.24
HMGCS1-202ENST00000433297 URI1O94763 535 aaPredicted RBP13.52□□□□□ -0.24
HMGCS1-202ENST00000433297 NPM1P06748 294 aaKnown RBP eCLIP13.52□□□□□ -0.241e-12■■□□□ 14.3
HMGCS1-202ENST00000433297 GNL2Q13823 731 aaKnown RBP13.52□□□□□ -0.24
HMGCS1-202ENST00000433297 RNF20Q5VTR2 975 aa13.52□□□□□ -0.24
HMGCS1-202ENST00000433297 FSD1Q9BTV5 496 aa13.52□□□□□ -0.24
HMGCS1-202ENST00000433297 CFAP45Q9UL16 551 aa13.52□□□□□ -0.24
HMGCS1-202ENST00000433297 PLA2G4AP47712 749 aa13.52□□□□□ -0.25
HMGCS1-202ENST00000433297 ME1P48163 572 aa13.52□□□□□ -0.25
HMGCS1-202ENST00000433297 RAD51AP2Q09MP3 1159 aa13.52□□□□□ -0.25
HMGCS1-202ENST00000433297 E4F1Q66K89 784 aaPredicted RBP13.52□□□□□ -0.25
HMGCS1-202ENST00000433297 SIL1Q9H173 461 aa13.52□□□□□ -0.25
HMGCS1-202ENST00000433297 ARGLU1Q9NWB6 273 aaPredicted RBP13.52□□□□□ -0.25
HMGCS1-202ENST00000433297 ERBB3P21860 1342 aa13.52□□□□□ -0.25
HMGCS1-202ENST00000433297 PI4KAP2A4QPH2 592 aa13.52□□□□□ -0.25
HMGCS1-202ENST00000433297 BIN1O00499 593 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms