RNA–Protein interactions for RNA: ENST00000433179.3

PERM1-202, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PERM1, Length 3,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-202ENST00000433179 CASC1Q6TDU7 716 aa15.76■□□□□ 0.11
PERM1-202ENST00000433179 HMMRO75330 724 aa15.76■□□□□ 0.11
PERM1-202ENST00000433179 UBTFL1P0CB47 393 aaPredicted RBP15.76■□□□□ 0.11
PERM1-202ENST00000433179 PPP1R42Q7Z4L9 355 aa15.76■□□□□ 0.11
PERM1-202ENST00000433179 TMEM63CQ9P1W3 806 aa15.76■□□□□ 0.11
PERM1-202ENST00000433179 NSFL1CQ9UNZ2 370 aaKnown RBP15.76■□□□□ 0.11
PERM1-202ENST00000433179 KIF3AQ9Y496 699 aa15.76■□□□□ 0.11
PERM1-202ENST00000433179 LRRCC1Q9C099 1032 aa15.76■□□□□ 0.11
PERM1-202ENST00000433179 ANO2Q9NQ90 1003 aa15.76■□□□□ 0.11
PERM1-202ENST00000433179 PLEKHO1Q53GL0 409 aaPredicted RBP15.75■□□□□ 0.11
PERM1-202ENST00000433179 C17orf53Q8N3J3 647 aaPredicted RBP15.75■□□□□ 0.11
PERM1-202ENST00000433179 DDX54Q8TDD1 881 aaKnown RBP15.75■□□□□ 0.11
PERM1-202ENST00000433179 BTBD11A6QL63 1104 aa15.75■□□□□ 0.11
PERM1-202ENST00000433179 TEFQ10587 303 aa15.75■□□□□ 0.11
PERM1-202ENST00000433179 CWF19L2Q2TBE0 894 aaKnown RBP15.75■□□□□ 0.11
PERM1-202ENST00000433179 MX1P20591 662 aa15.74■□□□□ 0.11
PERM1-202ENST00000433179 NKX1-1Q15270 411 aaPredicted RBP15.74■□□□□ 0.11
PERM1-202ENST00000433179 TAF3Q5VWG9 929 aa15.74■□□□□ 0.11
PERM1-202ENST00000433179 PA2G4Q9UQ80 394 aaKnown RBP15.74■□□□□ 0.11
PERM1-202ENST00000433179 AFDNP55196 1824 aaKnown RBP15.74■□□□□ 0.11
PERM1-202ENST00000433179 SRGAP3O43295 1099 aa15.74■□□□□ 0.11
PERM1-202ENST00000433179 NEK4P51957 841 aa15.74■□□□□ 0.11
PERM1-202ENST00000433179 GDPD2Q9HCC8 539 aa15.74■□□□□ 0.11
PERM1-202ENST00000433179 WDR17Q8IZU2 1322 aa15.74■□□□□ 0.11
PERM1-202ENST00000433179 TRERF1Q96PN7 1200 aa15.74■□□□□ 0.11
PERM1-202ENST00000433179 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.73■□□□□ 0.11
PERM1-202ENST00000433179 ANKRD36CQ5JPF3 1778 aa15.73■□□□□ 0.11
PERM1-202ENST00000433179 ATP8B2P98198 1209 aa15.73■□□□□ 0.11
PERM1-202ENST00000433179 COL15A1P39059 1388 aa15.72■□□□□ 0.11
PERM1-202ENST00000433179 HMGN5P82970 282 aaKnown RBP15.72■□□□□ 0.11
PERM1-202ENST00000433179 LRP10Q7Z4F1 713 aa15.72■□□□□ 0.11
PERM1-202ENST00000433179 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.72■□□□□ 0.11
PERM1-202ENST00000433179 ERC2O15083 957 aa15.71■□□□□ 0.11
PERM1-202ENST00000433179 MCM5P33992 734 aa15.71■□□□□ 0.11
PERM1-202ENST00000433179 ZFP91Q96JP5 570 aaPredicted RBP15.71■□□□□ 0.11
PERM1-202ENST00000433179 STRN4Q9NRL3 753 aa15.71■□□□□ 0.11
PERM1-202ENST00000433179 PHKG2P15735 406 aa15.71■□□□□ 0.11
PERM1-202ENST00000433179 LRSAM1Q6UWE0 723 aa15.71■□□□□ 0.11
PERM1-202ENST00000433179 KLHDC4Q8TBB5 520 aa15.71■□□□□ 0.11
PERM1-202ENST00000433179 PDLIM2Q96JY6 352 aa15.71■□□□□ 0.11
PERM1-202ENST00000433179 BCL2L12Q9HB09 334 aa15.71■□□□□ 0.11
PERM1-202ENST00000433179 MYL6BP14649 208 aa15.71■□□□□ 0.1
PERM1-202ENST00000433179 CPA1P15085 419 aa15.71■□□□□ 0.1
PERM1-202ENST00000433179 GNAI3P08754 354 aa15.7■□□□□ 0.1
PERM1-202ENST00000433179 IRX5P78411 483 aaPredicted RBP15.7■□□□□ 0.1
PERM1-202ENST00000433179 SRCIN1Q9C0H9 1055 aa15.7■□□□□ 0.1
PERM1-202ENST00000433179 A0A0G2JS52 829 aa15.7■□□□□ 0.1
PERM1-202ENST00000433179 CWC22Q9HCG8 908 aaKnown RBP15.7■□□□□ 0.1
PERM1-202ENST00000433179 ADCY9O60503 1353 aa15.69■□□□□ 0.1
PERM1-202ENST00000433179 COL5A3P25940 1745 aaPredicted RBP15.69■□□□□ 0.1
PERM1-202ENST00000433179 DOT1LQ8TEK3 1739 aa15.69■□□□□ 0.1
PERM1-202ENST00000433179 ERICH4A6NGS2 130 aa15.69■□□□□ 0.1
PERM1-202ENST00000433179 OS9Q13438 667 aaPredicted RBP15.69■□□□□ 0.1
PERM1-202ENST00000433179 UTYO14607 1347 aa15.69■□□□□ 0.1
PERM1-202ENST00000433179 CLEC17AQ6ZS10 378 aa15.69■□□□□ 0.1
PERM1-202ENST00000433179 ZBTB9Q96C00 473 aa15.69■□□□□ 0.1
PERM1-202ENST00000433179 ESYT1Q9BSJ8 1104 aa15.69■□□□□ 0.1
PERM1-202ENST00000433179 SIL1Q9H173 461 aa15.69■□□□□ 0.1
PERM1-202ENST00000433179 SPG7Q9UQ90 795 aa15.69■□□□□ 0.1
PERM1-202ENST00000433179 MAP3K2Q9Y2U5 619 aa15.69■□□□□ 0.1
PERM1-202ENST00000433179 ZDHHC9Q9Y397 364 aa15.69■□□□□ 0.1
PERM1-202ENST00000433179 CCDC9Q9Y3X0 531 aaKnown RBP15.69■□□□□ 0.1
PERM1-202ENST00000433179 SALL3Q9BXA9 1300 aa15.69■□□□□ 0.1
PERM1-202ENST00000433179 REC8O95072 547 aa15.68■□□□□ 0.1
PERM1-202ENST00000433179 CHMLP26374 656 aa15.68■□□□□ 0.1
PERM1-202ENST00000433179 DNAAF4Q8WXU2 420 aa15.68■□□□□ 0.1
PERM1-202ENST00000433179 PRIMPOLQ96LW4 560 aa15.68■□□□□ 0.1
PERM1-202ENST00000433179 PIP4K2BP78356 416 aa15.67■□□□□ 0.1
PERM1-202ENST00000433179 TTC12Q9H892 705 aaPredicted RBP15.67■□□□□ 0.1
PERM1-202ENST00000433179 IRX3P78415 501 aaPredicted RBP15.67■□□□□ 0.1
PERM1-202ENST00000433179 NOLC1Q14978 699 aaKnown RBP eCLIP15.67■□□□□ 0.1
PERM1-202ENST00000433179 C1orf141Q5JVX7 400 aa15.67■□□□□ 0.1
PERM1-202ENST00000433179 DHX37Q8IY37 1157 aaKnown RBP15.67■□□□□ 0.1
PERM1-202ENST00000433179 TSPY26PQ9H489 355 aa15.67■□□□□ 0.1
PERM1-202ENST00000433179 GIGYF1O75420 1035 aaPredicted RBP15.66■□□□□ 0.1
PERM1-202ENST00000433179 CYP2E1P05181 493 aaPredicted RBP15.66■□□□□ 0.1
PERM1-202ENST00000433179 PDIA6Q15084 440 aa15.66■□□□□ 0.1
PERM1-202ENST00000433179 BEND3Q5T5X7 828 aa15.66■□□□□ 0.1
PERM1-202ENST00000433179 CWC27Q6UX04 472 aaKnown RBP15.66■□□□□ 0.1
PERM1-202ENST00000433179 CARD10Q9BWT7 1032 aa15.66■□□□□ 0.1
PERM1-202ENST00000433179 SLC52A2Q9HAB3 445 aa15.66■□□□□ 0.1
PERM1-202ENST00000433179 USP25Q9UHP3 1055 aa15.66■□□□□ 0.1
PERM1-202ENST00000433179 THSD7AQ9UPZ6 1657 aa15.66■□□□□ 0.1
PERM1-202ENST00000433179 CHAF1AQ13111 956 aaPredicted RBP15.66■□□□□ 0.1
PERM1-202ENST00000433179 RHPN1Q8TCX5 695 aa15.66■□□□□ 0.1
PERM1-202ENST00000433179 COL9A3Q14050 684 aaPredicted RBP15.66■□□□□ 0.1
PERM1-202ENST00000433179 TMX3Q96JJ7 454 aa15.66■□□□□ 0.1
PERM1-202ENST00000433179 PRDM11Q9NQV5 511 aa15.65■□□□□ 0.1
PERM1-202ENST00000433179 NDUFB9Q9Y6M9 179 aa15.65■□□□□ 0.1
PERM1-202ENST00000433179 CYP27B1O15528 508 aa15.65■□□□□ 0.1
PERM1-202ENST00000433179 MBD3O95983 291 aa15.65■□□□□ 0.1
PERM1-202ENST00000433179 C9orf78Q9NZ63 289 aaPredicted RBP15.65■□□□□ 0.1
PERM1-202ENST00000433179 LAMB2P55268 1798 aa15.65■□□□□ 0.1
PERM1-202ENST00000433179 SLIT2O94813 1529 aa15.65■□□□□ 0.1
PERM1-202ENST00000433179 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.64■□□□□ 0.09
PERM1-202ENST00000433179 NFATC2IPQ8NCF5 419 aa15.64■□□□□ 0.09
PERM1-202ENST00000433179 DCAF5Q96JK2 942 aa15.64■□□□□ 0.09
PERM1-202ENST00000433179 BCORQ6W2J9 1755 aa15.63■□□□□ 0.09
PERM1-202ENST00000433179 SYAP1Q96A49 352 aaPredicted RBP15.63■□□□□ 0.09
PERM1-202ENST00000433179 TRIM34Q9BYJ4 488 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms