RNA–Protein interactions for RNA: ENST00000433083.6

PHC1-201, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best) BASIC

Gene PHC1, Length 5,033 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-201ENST00000433083 CATIPQ7Z7H3 387 aa13.09□□□□□ -0.31
PHC1-201ENST00000433083 PER1O15534 1290 aaPredicted RBP13.08□□□□□ -0.32
PHC1-201ENST00000433083 HOXB7P09629 217 aa13.08□□□□□ -0.32
PHC1-201ENST00000433083 ZNF804AQ7Z570 1209 aa13.08□□□□□ -0.32
PHC1-201ENST00000433083 ANKRD44Q8N8A2 993 aa13.08□□□□□ -0.32
PHC1-201ENST00000433083 VAMP4O75379 141 aa13.08□□□□□ -0.32
PHC1-201ENST00000433083 OGFOD1Q8N543 542 aa13.08□□□□□ -0.32
PHC1-201ENST00000433083 PDILTQ8N807 584 aa13.08□□□□□ -0.32
PHC1-201ENST00000433083 ACBD3Q9H3P7 528 aa13.08□□□□□ -0.32
PHC1-201ENST00000433083 STK32BQ9NY57 414 aa13.08□□□□□ -0.32
PHC1-201ENST00000433083 CCNL1Q9UK58 526 aaPredicted RBP13.08□□□□□ -0.32
PHC1-201ENST00000433083 ADGBQ8N7X0 1667 aa13.08□□□□□ -0.32
PHC1-201ENST00000433083 EFCAB6Q5THR3 1501 aa13.08□□□□□ -0.32
PHC1-201ENST00000433083 CCDC192P0DO97 292 aa13.08□□□□□ -0.32
PHC1-201ENST00000433083 CCDC112Q8NEF3 446 aa13.08□□□□□ -0.32
PHC1-201ENST00000433083 CUL5Q93034 780 aa13.08□□□□□ -0.32
PHC1-201ENST00000433083 DDX11Q96FC9 970 aa13.08□□□□□ -0.32
PHC1-201ENST00000433083 IRS4O14654 1257 aaPredicted RBP13.07□□□□□ -0.32
PHC1-201ENST00000433083 GNPATO15228 680 aa13.07□□□□□ -0.32
PHC1-201ENST00000433083 ZNF790Q6PG37 636 aa13.07□□□□□ -0.32
PHC1-201ENST00000433083 SMARCE1Q969G3 411 aa13.07□□□□□ -0.32
PHC1-201ENST00000433083 CWC15Q9P013 229 aaKnown RBP13.07□□□□□ -0.32
PHC1-201ENST00000433083 USP21Q9UK80 565 aa13.07□□□□□ -0.32
PHC1-201ENST00000433083 KDM5DQ9BY66 1539 aa13.07□□□□□ -0.32
PHC1-201ENST00000433083 UPF3BQ9BZI7 483 aaKnown RBP13.07□□□□□ -0.32
PHC1-201ENST00000433083 HMG20BQ9P0W2 317 aa13.07□□□□□ -0.32
PHC1-201ENST00000433083 KIF5BP33176 963 aa13.07□□□□□ -0.32
PHC1-201ENST00000433083 PARP10Q53GL7 1025 aa13.07□□□□□ -0.32
PHC1-201ENST00000433083 PPP4R3BQ5MIZ7 849 aa13.07□□□□□ -0.32
PHC1-201ENST00000433083 FEZ1Q99689 392 aa13.07□□□□□ -0.32
PHC1-201ENST00000433083 TNMDQ9H2S6 317 aa13.07□□□□□ -0.32
PHC1-201ENST00000433083 SSBP05455 408 aaKnown RBP eCLIP13.07□□□□□ -0.32
PHC1-201ENST00000433083 ZC3H12CQ9C0D7 883 aaKnown RBP13.07□□□□□ -0.32
PHC1-201ENST00000433083 ANKRD2Q9GZV1 360 aa13.07□□□□□ -0.32
PHC1-201ENST00000433083 PHAXQ9H814 394 aaKnown RBP13.06□□□□□ -0.32
PHC1-201ENST00000433083 EHMT1Q9H9B1 1298 aa13.06□□□□□ -0.32
PHC1-201ENST00000433083 NPHP4O75161 1426 aaPredicted RBP13.06□□□□□ -0.32
PHC1-201ENST00000433083 MFSD6Q6ZSS7 791 aa13.06□□□□□ -0.32
PHC1-201ENST00000433083 DHX8Q14562 1220 aaKnown RBP13.06□□□□□ -0.32
PHC1-201ENST00000433083 SYCP1Q15431 976 aa13.06□□□□□ -0.32
PHC1-201ENST00000433083 EYA3Q99504 573 aa13.06□□□□□ -0.32
PHC1-201ENST00000433083 SAMD9LQ8IVG5 1584 aa13.06□□□□□ -0.32
PHC1-201ENST00000433083 TSPY2A6NKD2 308 aa13.06□□□□□ -0.32
PHC1-201ENST00000433083 CCDC178Q5BJE1 867 aa13.06□□□□□ -0.32
PHC1-201ENST00000433083 CCDC83Q8IWF9 413 aa13.06□□□□□ -0.32
PHC1-201ENST00000433083 GOLGA8AA7E2F4 631 aa13.05□□□□□ -0.32
PHC1-201ENST00000433083 GOLGA8BA8MQT2 603 aa13.05□□□□□ -0.32
PHC1-201ENST00000433083 SMC2O95347 1197 aa13.05□□□□□ -0.32
PHC1-201ENST00000433083 TTC22Q5TAA0 569 aa13.05□□□□□ -0.32
PHC1-201ENST00000433083 CEP57L1Q8IYX8 460 aa13.05□□□□□ -0.32
PHC1-201ENST00000433083 CCDC12Q8WUD4 166 aaPredicted RBP13.05□□□□□ -0.32
PHC1-201ENST00000433083 SYCE3A1L190 88 aa13.05□□□□□ -0.32
PHC1-201ENST00000433083 FAM98CQ17RN3 349 aaKnown RBP13.05□□□□□ -0.32
PHC1-201ENST00000433083 LIMCH1Q9UPQ0 1083 aa13.05□□□□□ -0.32
PHC1-201ENST00000433083 C8orf76Q96K31 380 aa13.05□□□□□ -0.32
PHC1-201ENST00000433083 TMEM94Q12767 1356 aa13.05□□□□□ -0.32
PHC1-201ENST00000433083 NCOA7Q8NI08 942 aa13.05□□□□□ -0.32
PHC1-201ENST00000433083 RAB34Q9BZG1 259 aa13.05□□□□□ -0.32
PHC1-201ENST00000433083 SSRP1Q08945 709 aaKnown RBP13.04□□□□□ -0.32
PHC1-201ENST00000433083 NLRP1Q9C000 1473 aa13.04□□□□□ -0.32
PHC1-201ENST00000433083 ZCCHC11Q5TAX3 1644 aaKnown RBP13.04□□□□□ -0.32
PHC1-201ENST00000433083 CYP7A1P22680 504 aa13.04□□□□□ -0.32
PHC1-201ENST00000433083 PDCL2Q8N4E4 241 aa13.04□□□□□ -0.32
PHC1-201ENST00000433083 SLC52A2Q9HAB3 445 aa13.04□□□□□ -0.32
PHC1-201ENST00000433083 PLBD2Q8NHP8 589 aa13.04□□□□□ -0.32
PHC1-201ENST00000433083 JDP2Q8WYK2 163 aa13.04□□□□□ -0.32
PHC1-201ENST00000433083 TNPO1Q92973 898 aaKnown RBP13.04□□□□□ -0.32
PHC1-201ENST00000433083 KAT14Q9H8E8 782 aa13.04□□□□□ -0.32
PHC1-201ENST00000433083 PLXNC1O60486 1568 aa13.04□□□□□ -0.32
PHC1-201ENST00000433083 CLCN1P35523 988 aa13.04□□□□□ -0.32
PHC1-201ENST00000433083 PAXIP1Q6ZW49 1069 aaPredicted RBP13.04□□□□□ -0.32
PHC1-201ENST00000433083 NUCB1Q02818 461 aa13.03□□□□□ -0.32
PHC1-201ENST00000433083 TMEM67Q5HYA8 995 aa13.03□□□□□ -0.32
PHC1-201ENST00000433083 NAA16Q6N069 864 aaPredicted RBP13.03□□□□□ -0.32
PHC1-201ENST00000433083 ZMYND15Q9H091 742 aa13.03□□□□□ -0.32
PHC1-201ENST00000433083 ZNHIT6Q9NWK9 470 aaKnown RBP13.03□□□□□ -0.32
PHC1-201ENST00000433083 UGGT1Q9NYU2 1555 aa13.03□□□□□ -0.32
PHC1-201ENST00000433083 ZFYVE27Q5T4F4 411 aa13.03□□□□□ -0.32
PHC1-201ENST00000433083 TSPYL6Q8N831 410 aa13.03□□□□□ -0.32
PHC1-201ENST00000433083 RBM17Q96I25 401 aaKnown RBP13.03□□□□□ -0.32
PHC1-201ENST00000433083 PTPRTO14522 1441 aa13.03□□□□□ -0.32
PHC1-201ENST00000433083 CNBD1Q8NA66 436 aa13.03□□□□□ -0.32
PHC1-201ENST00000433083 DDX17Q92841 729 aaKnown RBP13.03□□□□□ -0.32
PHC1-201ENST00000433083 NSFL1CQ9UNZ2 370 aaKnown RBP13.03□□□□□ -0.32
PHC1-201ENST00000433083 TRAF1Q13077 416 aa13.03□□□□□ -0.32
PHC1-201ENST00000433083 KAT6BQ8WYB5 2073 aa13.03□□□□□ -0.32
PHC1-201ENST00000433083 CCDC194A0A1B0GVG4 234 aa13.02□□□□□ -0.32
PHC1-201ENST00000433083 PLCG2P16885 1265 aa13.02□□□□□ -0.32
PHC1-201ENST00000433083 SERPINC1P01008 464 aa13.02□□□□□ -0.32
PHC1-201ENST00000433083 PRIM1P49642 420 aaKnown RBP13.02□□□□□ -0.32
PHC1-201ENST00000433083 BRPF1P55201 1214 aaPredicted RBP13.02□□□□□ -0.32
PHC1-201ENST00000433083 CWF19L2Q2TBE0 894 aaKnown RBP13.02□□□□□ -0.32
PHC1-201ENST00000433083 WDR78Q5VTH9 848 aa13.02□□□□□ -0.32
PHC1-201ENST00000433083 NEK1Q96PY6 1258 aa13.02□□□□□ -0.32
PHC1-201ENST00000433083 KRT23Q9C075 422 aa13.02□□□□□ -0.32
PHC1-201ENST00000433083 HECW2Q9P2P5 1572 aa13.02□□□□□ -0.33
PHC1-201ENST00000433083 SBNO2Q9Y2G9 1366 aa13.02□□□□□ -0.33
PHC1-201ENST00000433083 CCP110O43303 1012 aa13.02□□□□□ -0.33
PHC1-201ENST00000433083 NLRP5P59047 1200 aa13.02□□□□□ -0.33
PHC1-201ENST00000433083 TBC1D9Q6ZT07 1266 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms