RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 PTGER2P43116 358 aa5.73□□□□□ -1.49
UBE4A-202ENST00000431736 ATF7IPQ6VMQ6 1270 aa5.73□□□□□ -1.49
UBE4A-202ENST00000431736 NCAPD2Q15021 1401 aa5.72□□□□□ -1.49
UBE4A-202ENST00000431736 HEG1Q9ULI3 1381 aa5.72□□□□□ -1.49
UBE4A-202ENST00000431736 ALDH1A1P00352 501 aa5.72□□□□□ -1.49
UBE4A-202ENST00000431736 DGKZQ13574 1117 aa5.72□□□□□ -1.49
UBE4A-202ENST00000431736 CCDC85AQ96PX6 553 aaPredicted RBP5.72□□□□□ -1.49
UBE4A-202ENST00000431736 DAXXQ9UER7 740 aaPredicted RBP5.72□□□□□ -1.49
UBE4A-202ENST00000431736 PLCH1Q4KWH8 1693 aa5.72□□□□□ -1.49
UBE4A-202ENST00000431736 DCAF15Q66K64 600 aa5.72□□□□□ -1.49
UBE4A-202ENST00000431736 LGR6Q9HBX8 967 aa5.72□□□□□ -1.49
UBE4A-202ENST00000431736 MAP3K15Q6ZN16 1313 aa5.72□□□□□ -1.49
UBE4A-202ENST00000431736 MYO3BQ8WXR4 1341 aa5.72□□□□□ -1.49
UBE4A-202ENST00000431736 CYP19A1P11511 503 aaPredicted RBP5.72□□□□□ -1.49
UBE4A-202ENST00000431736 GPC2Q8N158 579 aa5.72□□□□□ -1.49
UBE4A-202ENST00000431736 XAGE3Q8WTP9 111 aa5.72□□□□□ -1.49
UBE4A-202ENST00000431736 TESK2Q96S53 571 aa5.72□□□□□ -1.49
UBE4A-202ENST00000431736 BABAM1Q9NWV8 329 aa5.72□□□□□ -1.49
UBE4A-202ENST00000431736 PRKAG2Q9UGJ0 569 aa5.72□□□□□ -1.49
UBE4A-202ENST00000431736 ABCC6O95255 1503 aa5.72□□□□□ -1.49
UBE4A-202ENST00000431736 RAD17O75943 681 aa5.72□□□□□ -1.49
UBE4A-202ENST00000431736 CCDC27Q2M243 656 aa5.72□□□□□ -1.49
UBE4A-202ENST00000431736 NUTM1Q86Y26 1132 aa5.72□□□□□ -1.49
UBE4A-202ENST00000431736 RPS12P25398 132 aaKnown RBP5.71□□□□□ -1.49
UBE4A-202ENST00000431736 COPS6Q7L5N1 327 aa5.71□□□□□ -1.49
UBE4A-202ENST00000431736 APOBEC3FQ8IUX4 373 aaKnown RBP5.71□□□□□ -1.49
UBE4A-202ENST00000431736 LRRFIP2Q9Y608 721 aaKnown RBP5.71□□□□□ -1.49
UBE4A-202ENST00000431736 SOS1Q07889 1333 aaPredicted RBP5.71□□□□□ -1.49
UBE4A-202ENST00000431736 MLLT1Q03111 559 aaPredicted RBP5.71□□□□□ -1.49
UBE4A-202ENST00000431736 LRRFIP1Q32MZ4 808 aaKnown RBP5.71□□□□□ -1.49
UBE4A-202ENST00000431736 MIS18AQ9NYP9 233 aa5.71□□□□□ -1.49
UBE4A-202ENST00000431736 BCL9O00512 1426 aa5.71□□□□□ -1.49
UBE4A-202ENST00000431736 DDNO94850 711 aaPredicted RBP5.71□□□□□ -1.5
UBE4A-202ENST00000431736 YBX3P16989 372 aaKnown RBP eCLIP5.71□□□□□ -1.56e-7■■□□□ 12
UBE4A-202ENST00000431736 IL13P35225 146 aa5.71□□□□□ -1.5
UBE4A-202ENST00000431736 PRKG1Q13976 671 aa5.71□□□□□ -1.5
UBE4A-202ENST00000431736 WDR78Q5VTH9 848 aa5.71□□□□□ -1.5
UBE4A-202ENST00000431736 TBC1D9BQ66K14 1250 aa5.71□□□□□ -1.5
UBE4A-202ENST00000431736 PICK1Q9NRD5 415 aa5.71□□□□□ -1.5
UBE4A-202ENST00000431736 CREBZFQ9NS37 354 aa5.71□□□□□ -1.5
UBE4A-202ENST00000431736 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.71□□□□□ -1.5
UBE4A-202ENST00000431736 LDHCP07864 332 aa5.71□□□□□ -1.5
UBE4A-202ENST00000431736 PRR5LQ6MZQ0 368 aa5.71□□□□□ -1.5
UBE4A-202ENST00000431736 VPS33BQ9H267 617 aa5.71□□□□□ -1.5
UBE4A-202ENST00000431736 ADGRB1O14514 1584 aa5.71□□□□□ -1.5
UBE4A-202ENST00000431736 RAD21O60216 631 aa5.71□□□□□ -1.5
UBE4A-202ENST00000431736 PIP4K2AP48426 406 aaPredicted RBP5.71□□□□□ -1.5
UBE4A-202ENST00000431736 PABPC4Q13310 644 aaKnown RBP eCLIP5.71□□□□□ -1.5
UBE4A-202ENST00000431736 ZGPATQ8N5A5 531 aaKnown RBP5.71□□□□□ -1.5
UBE4A-202ENST00000431736 CRAMP1Q96RY5 1269 aa5.71□□□□□ -1.5
UBE4A-202ENST00000431736 GBA2Q9HCG7 927 aaPredicted RBP5.71□□□□□ -1.5
UBE4A-202ENST00000431736 RPS8P62241 208 aaKnown RBP5.7□□□□□ -1.5
UBE4A-202ENST00000431736 SPTY2D1Q68D10 685 aaPredicted RBP5.7□□□□□ -1.5
UBE4A-202ENST00000431736 PTF1AQ7RTS3 328 aa5.7□□□□□ -1.5
UBE4A-202ENST00000431736 GPATCH3Q96I76 525 aa5.7□□□□□ -1.5
UBE4A-202ENST00000431736 KIAA1210Q9ULL0 1709 aa5.7□□□□□ -1.5
UBE4A-202ENST00000431736 SLC5A1P13866 664 aa5.7□□□□□ -1.5
UBE4A-202ENST00000431736 DCTN1Q14203 1278 aa5.7□□□□□ -1.5
UBE4A-202ENST00000431736 METTL24Q5JXM2 366 aa5.7□□□□□ -1.5
UBE4A-202ENST00000431736 IFFO2Q5TF58 517 aa5.7□□□□□ -1.5
UBE4A-202ENST00000431736 CRACR2BQ8N4Y2 399 aaPredicted RBP5.7□□□□□ -1.5
UBE4A-202ENST00000431736 DUSP27Q5VZP5 1158 aa5.7□□□□□ -1.5
UBE4A-202ENST00000431736 PROM2Q8N271 834 aa5.7□□□□□ -1.5
UBE4A-202ENST00000431736 CAPNS2Q96L46 248 aa5.7□□□□□ -1.5
UBE4A-202ENST00000431736 UBXN2AP68543 259 aa5.7□□□□□ -1.5
UBE4A-202ENST00000431736 G3BP1Q13283 466 aaKnown RBP eCLIP5.7□□□□□ -1.57e-8■■■□□ 15.6
UBE4A-202ENST00000431736 MAP1SQ66K74 1059 aaPredicted RBP5.7□□□□□ -1.5
UBE4A-202ENST00000431736 DZIP1Q86YF9 867 aaKnown RBP5.7□□□□□ -1.5
UBE4A-202ENST00000431736 ATP5J2-PTCD1G3V325 749 aa5.7□□□□□ -1.5
UBE4A-202ENST00000431736 PDE8AO60658 829 aa5.7□□□□□ -1.5
UBE4A-202ENST00000431736 HCLS1P14317 486 aaPredicted RBP5.7□□□□□ -1.5
UBE4A-202ENST00000431736 GRAPQ13588 217 aa5.7□□□□□ -1.5
UBE4A-202ENST00000431736 KIF4BQ2VIQ3 1234 aa5.7□□□□□ -1.5
UBE4A-202ENST00000431736 PLBD2Q8NHP8 589 aa5.7□□□□□ -1.5
UBE4A-202ENST00000431736 GRAPLQ8TC17 118 aaPredicted RBP5.7□□□□□ -1.5
UBE4A-202ENST00000431736 PDGFDQ9GZP0 370 aaPredicted RBP5.7□□□□□ -1.5
UBE4A-202ENST00000431736 NR2E3Q9Y5X4 410 aa5.7□□□□□ -1.5
UBE4A-202ENST00000431736 F8W031 263 aaPredicted RBP5.69□□□□□ -1.5
UBE4A-202ENST00000431736 USP48Q86UV5 1035 aa5.69□□□□□ -1.5
UBE4A-202ENST00000431736 CNOT7Q9UIV1 285 aaKnown RBP5.69□□□□□ -1.5
UBE4A-202ENST00000431736 SLIT3O75094 1523 aa5.69□□□□□ -1.5
UBE4A-202ENST00000431736 NRKQ7Z2Y5 1582 aa5.69□□□□□ -1.5
UBE4A-202ENST00000431736 POLRMTO00411 1230 aaKnown RBP5.69□□□□□ -1.5
UBE4A-202ENST00000431736 MYCNP04198 464 aaPredicted RBP5.69□□□□□ -1.5
UBE4A-202ENST00000431736 USP17L8P0C7I0 530 aa5.69□□□□□ -1.5
UBE4A-202ENST00000431736 TBC1D10BQ4KMP7 808 aaPredicted RBP5.69□□□□□ -1.5
UBE4A-202ENST00000431736 SAMD1Q6SPF0 538 aaPredicted RBP5.69□□□□□ -1.5
UBE4A-202ENST00000431736 HMMRO75330 724 aa5.69□□□□□ -1.5
UBE4A-202ENST00000431736 GLRX3O76003 335 aaKnown RBP5.69□□□□□ -1.5
UBE4A-202ENST00000431736 ERO1AQ96HE7 468 aa5.69□□□□□ -1.5
UBE4A-202ENST00000431736 SRCIN1Q9C0H9 1055 aa5.69□□□□□ -1.5
UBE4A-202ENST00000431736 CEP126Q9P2H0 1117 aa5.69□□□□□ -1.5
UBE4A-202ENST00000431736 XDHP47989 1333 aa5.69□□□□□ -1.5
UBE4A-202ENST00000431736 MMP14P50281 582 aa5.69□□□□□ -1.5
UBE4A-202ENST00000431736 GSTO1P78417 241 aa5.69□□□□□ -1.5
UBE4A-202ENST00000431736 AOC3Q16853 763 aa5.69□□□□□ -1.5
UBE4A-202ENST00000431736 SP8Q8IXZ3 490 aa5.69□□□□□ -1.5
UBE4A-202ENST00000431736 SMCR8Q8TEV9 937 aaPredicted RBP5.69□□□□□ -1.5
UBE4A-202ENST00000431736 DDX21Q9NR30 783 aaKnown RBP eCLIP5.69□□□□□ -1.5
UBE4A-202ENST00000431736 MEGF6O75095 1541 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms