RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 BEND3Q5T5X7 828 aa23.42■■□□□ 1.34
RFTN1-202ENST00000431547 NUTM1Q86Y26 1132 aa23.42■■□□□ 1.34
RFTN1-202ENST00000431547 CCDC24Q8N4L8 307 aa23.42■■□□□ 1.34
RFTN1-202ENST00000431547 CWC25Q9NXE8 425 aaPredicted RBP23.42■■□□□ 1.34
RFTN1-202ENST00000431547 ARFGEF2Q9Y6D5 1785 aa23.42■■□□□ 1.34
RFTN1-202ENST00000431547 NEURL1BA8MQ27 555 aa23.41■■□□□ 1.34
RFTN1-202ENST00000431547 IPO8O15397 1037 aaKnown RBP23.41■■□□□ 1.34
RFTN1-202ENST00000431547 PDE6BP35913 854 aa23.41■■□□□ 1.34
RFTN1-202ENST00000431547 CWF19L2Q2TBE0 894 aaKnown RBP23.41■■□□□ 1.34
RFTN1-202ENST00000431547 SLC10A5Q5PT55 438 aa23.41■■□□□ 1.34
RFTN1-202ENST00000431547 NLGN2Q8NFZ4 835 aa23.41■■□□□ 1.34
RFTN1-202ENST00000431547 SH3TC1Q8TE82 1336 aa23.4■■□□□ 1.34
RFTN1-202ENST00000431547 API5Q9BZZ5 524 aaKnown RBP23.4■■□□□ 1.34
RFTN1-202ENST00000431547 PDZRN3Q9UPQ7 1066 aa23.4■■□□□ 1.34
RFTN1-202ENST00000431547 SRCAPQ6ZRS2 3230 aa23.4■■□□□ 1.34
RFTN1-202ENST00000431547 KLRG2A4D1S0 409 aaPredicted RBP23.39■■□□□ 1.33
RFTN1-202ENST00000431547 SLC4A10Q6U841 1118 aa23.39■■□□□ 1.33
RFTN1-202ENST00000431547 ZBTB38Q8NAP3 1195 aaPredicted RBP23.39■■□□□ 1.33
RFTN1-202ENST00000431547 RCAN3Q9UKA8 241 aa23.39■■□□□ 1.33
RFTN1-202ENST00000431547 PCCAP05165 728 aaPredicted RBP23.38■■□□□ 1.33
RFTN1-202ENST00000431547 GCKRQ14397 625 aa23.38■■□□□ 1.33
RFTN1-202ENST00000431547 FAM89AQ96GI7 184 aa23.38■■□□□ 1.33
RFTN1-202ENST00000431547 AFDNP55196 1824 aaKnown RBP23.38■■□□□ 1.33
RFTN1-202ENST00000431547 ANKRD36CQ5JPF3 1778 aa23.37■■□□□ 1.33
RFTN1-202ENST00000431547 RIC1Q4ADV7 1423 aa23.37■■□□□ 1.33
RFTN1-202ENST00000431547 A0A0G2JLW4 131 aa23.37■■□□□ 1.33
RFTN1-202ENST00000431547 ALDH1L1O75891 902 aa23.37■■□□□ 1.33
RFTN1-202ENST00000431547 DPEP1P16444 411 aa23.37■■□□□ 1.33
RFTN1-202ENST00000431547 SYNE4Q8N205 404 aa23.37■■□□□ 1.33
RFTN1-202ENST00000431547 FRAT1Q92837 279 aaPredicted RBP23.37■■□□□ 1.33
RFTN1-202ENST00000431547 SRCIN1Q9C0H9 1055 aa23.37■■□□□ 1.33
RFTN1-202ENST00000431547 ABCC12Q96J65 1359 aa23.37■■□□□ 1.33
RFTN1-202ENST00000431547 PXDNLA1KZ92 1463 aa23.36■■□□□ 1.33
RFTN1-202ENST00000431547 H0YIN7 160 aa23.36■■□□□ 1.33
RFTN1-202ENST00000431547 KCNA3P22001 575 aa23.36■■□□□ 1.33
RFTN1-202ENST00000431547 ATF7IPQ6VMQ6 1270 aa23.36■■□□□ 1.33
RFTN1-202ENST00000431547 H7C1W4 665 aa23.35■■□□□ 1.33
RFTN1-202ENST00000431547 CHRNA5P30532 468 aa23.35■■□□□ 1.33
RFTN1-202ENST00000431547 C2CD5Q86YS7 1000 aa23.35■■□□□ 1.33
RFTN1-202ENST00000431547 KIF13BQ9NQT8 1826 aa23.35■■□□□ 1.33
RFTN1-202ENST00000431547 HCLS1P14317 486 aaPredicted RBP23.34■■□□□ 1.33
RFTN1-202ENST00000431547 TRIM27P14373 513 aa23.34■■□□□ 1.33
RFTN1-202ENST00000431547 HSP90B1P14625 803 aaKnown RBP23.34■■□□□ 1.33
RFTN1-202ENST00000431547 ZKSCAN2Q63HK3 967 aa23.34■■□□□ 1.33
RFTN1-202ENST00000431547 NLRP3Q96P20 1036 aa23.34■■□□□ 1.33
RFTN1-202ENST00000431547 IRS4O14654 1257 aaPredicted RBP23.33■■□□□ 1.33
RFTN1-202ENST00000431547 SRGNP10124 158 aa23.33■■□□□ 1.33
RFTN1-202ENST00000431547 CCT4P50991 539 aaKnown RBP23.33■■□□□ 1.33
RFTN1-202ENST00000431547 CRY2Q49AN0 593 aa23.33■■□□□ 1.33
RFTN1-202ENST00000431547 RTL5Q5HYW3 569 aaPredicted RBP23.33■■□□□ 1.33
RFTN1-202ENST00000431547 CDHR2Q9BYE9 1310 aa23.33■■□□□ 1.32
RFTN1-202ENST00000431547 PIM2Q9P1W9 311 aa23.32■■□□□ 1.32
RFTN1-202ENST00000431547 JARID2Q92833 1246 aaPredicted RBP23.31■■□□□ 1.32
RFTN1-202ENST00000431547 MASTLQ96GX5 879 aa23.31■■□□□ 1.32
RFTN1-202ENST00000431547 ABCC4O15439 1325 aa23.31■■□□□ 1.32
RFTN1-202ENST00000431547 GRM8O00222 908 aa23.3■■□□□ 1.32
RFTN1-202ENST00000431547 NPR1P16066 1061 aa23.3■■□□□ 1.32
RFTN1-202ENST00000431547 CASP7P55210 303 aa23.3■■□□□ 1.32
RFTN1-202ENST00000431547 INTS3Q68E01 1043 aaKnown RBP23.3■■□□□ 1.32
RFTN1-202ENST00000431547 STYK1Q6J9G0 422 aa23.3■■□□□ 1.32
RFTN1-202ENST00000431547 C3orf67Q6ZVT6 689 aa23.3■■□□□ 1.32
RFTN1-202ENST00000431547 UBE3BQ7Z3V4 1068 aa23.3■■□□□ 1.32
RFTN1-202ENST00000431547 HOXA10P31260 410 aaPredicted RBP23.29■■□□□ 1.32
RFTN1-202ENST00000431547 C9orf78Q9NZ63 289 aaPredicted RBP23.29■■□□□ 1.32
RFTN1-202ENST00000431547 PDE8AO60658 829 aa23.28■■□□□ 1.32
RFTN1-202ENST00000431547 SF3B3Q15393 1217 aaKnown RBP23.28■■□□□ 1.32
RFTN1-202ENST00000431547 ZNF622Q969S3 477 aaKnown RBP eCLIP23.28■■□□□ 1.32
RFTN1-202ENST00000431547 TNNQ9UQP3 1299 aa23.28■■□□□ 1.32
RFTN1-202ENST00000431547 UTYO14607 1347 aa23.28■■□□□ 1.32
RFTN1-202ENST00000431547 ANKRD31Q8N7Z5 1873 aa23.28■■□□□ 1.32
RFTN1-202ENST00000431547 KIAA1551Q9HCM1 1747 aa23.28■■□□□ 1.32
RFTN1-202ENST00000431547 TTLL6Q8N841 843 aa23.27■■□□□ 1.32
RFTN1-202ENST00000431547 CNKSR1Q969H4 720 aa23.27■■□□□ 1.32
RFTN1-202ENST00000431547 CLUAP1Q96AJ1 413 aa23.27■■□□□ 1.32
RFTN1-202ENST00000431547 PLA2G12BQ9BX93 195 aa23.27■■□□□ 1.32
RFTN1-202ENST00000431547 ALDH1B1P30837 517 aa23.26■■□□□ 1.31
RFTN1-202ENST00000431547 DALRD3Q5D0E6 543 aaKnown RBP23.26■■□□□ 1.31
RFTN1-202ENST00000431547 DZIP1LQ8IYY4 767 aaKnown RBP23.26■■□□□ 1.31
RFTN1-202ENST00000431547 RPGRQ92834 1020 aaKnown RBP23.26■■□□□ 1.31
RFTN1-202ENST00000431547 USP44Q9H0E7 712 aa23.26■■□□□ 1.31
RFTN1-202ENST00000431547 RBM17Q96I25 401 aaKnown RBP23.25■■□□□ 1.31
RFTN1-202ENST00000431547 CRAMP1Q96RY5 1269 aa23.25■■□□□ 1.31
RFTN1-202ENST00000431547 NBPF7P0C2Y1 421 aaPredicted RBP23.24■■□□□ 1.31
RFTN1-202ENST00000431547 MS4A1P11836 297 aa23.24■■□□□ 1.31
RFTN1-202ENST00000431547 FTSJ3Q8IY81 847 aaKnown RBP23.24■■□□□ 1.31
RFTN1-202ENST00000431547 BCS1LQ9Y276 419 aa23.24■■□□□ 1.31
RFTN1-202ENST00000431547 TNRC6CQ9HCJ0 1690 aaKnown RBP23.24■■□□□ 1.31
RFTN1-202ENST00000431547 CTSWP56202 376 aa23.23■■□□□ 1.31
RFTN1-202ENST00000431547 GPR162Q16538 588 aa23.23■■□□□ 1.31
RFTN1-202ENST00000431547 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.23■■□□□ 1.31
RFTN1-202ENST00000431547 WWC3Q9ULE0 1092 aa23.23■■□□□ 1.31
RFTN1-202ENST00000431547 N4BP2Q86UW6 1770 aaPredicted RBP23.22■■□□□ 1.31
RFTN1-202ENST00000431547 DCAF8L1A6NGE4 600 aa23.22■■□□□ 1.31
RFTN1-202ENST00000431547 YBX3P16989 372 aaKnown RBP eCLIP23.22■■□□□ 1.31
RFTN1-202ENST00000431547 CCDC152Q4G0S7 254 aa23.22■■□□□ 1.31
RFTN1-202ENST00000431547 DDX46Q7L014 1031 aaKnown RBP23.22■■□□□ 1.31
RFTN1-202ENST00000431547 TMEM57Q8N5G2 664 aa23.22■■□□□ 1.31
RFTN1-202ENST00000431547 TTLL11Q8NHH1 800 aa23.22■■□□□ 1.31
RFTN1-202ENST00000431547 PLIN1O60240 522 aa23.21■■□□□ 1.31
RFTN1-202ENST00000431547 CSF1RP07333 972 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms