RNA–Protein interactions for RNA: ENST00000431460.1

TRERNA1-201, translation regulatory long non-coding RNA 1, humanhuman

TSL 2 BASIC

Gene TRERNA1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERNA1-201ENST00000431460 TCERG1O14776 1098 aaKnown RBP15.33■□□□□ 0.04
TRERNA1-201ENST00000431460 LMNB1P20700 586 aa15.33■□□□□ 0.04
TRERNA1-201ENST00000431460 PARP10Q53GL7 1025 aa15.33■□□□□ 0.04
TRERNA1-201ENST00000431460 HSP90AB3PQ58FF7 597 aa15.33■□□□□ 0.04
TRERNA1-201ENST00000431460 OLFM4Q6UX06 510 aa15.33■□□□□ 0.04
TRERNA1-201ENST00000431460 TSPYL6Q8N831 410 aa15.33■□□□□ 0.04
TRERNA1-201ENST00000431460 RPGRQ92834 1020 aaKnown RBP15.33■□□□□ 0.04
TRERNA1-201ENST00000431460 UTP14AQ9BVJ6 771 aaKnown RBP15.33■□□□□ 0.04
TRERNA1-201ENST00000431460 HYPKQ9NX55 129 aa15.33■□□□□ 0.04
TRERNA1-201ENST00000431460 FANCIQ9NVI1 1328 aa15.33■□□□□ 0.04
TRERNA1-201ENST00000431460 ARFGEF2Q9Y6D5 1785 aa15.32■□□□□ 0.04
TRERNA1-201ENST00000431460 SLFN5Q08AF3 891 aa15.32■□□□□ 0.04
TRERNA1-201ENST00000431460 C3orf67Q6ZVT6 689 aa15.32■□□□□ 0.04
TRERNA1-201ENST00000431460 NLRP10Q86W26 655 aa15.32■□□□□ 0.04
TRERNA1-201ENST00000431460 PHAXQ9H814 394 aaKnown RBP15.32■□□□□ 0.04
TRERNA1-201ENST00000431460 NMRK2Q9NPI5 230 aa15.32■□□□□ 0.04
TRERNA1-201ENST00000431460 TIAM2Q8IVF5 1701 aa15.31■□□□□ 0.04
TRERNA1-201ENST00000431460 KLRG2A4D1S0 409 aaPredicted RBP15.31■□□□□ 0.04
TRERNA1-201ENST00000431460 ATP5J2-PTCD1G3V325 749 aa15.31■□□□□ 0.04
TRERNA1-201ENST00000431460 TCIRG1Q13488 830 aa15.31■□□□□ 0.04
TRERNA1-201ENST00000431460 ANKRD13DQ6ZTN6 518 aa15.31■□□□□ 0.04
TRERNA1-201ENST00000431460 TRMT2AQ8IZ69 625 aaKnown RBP15.31■□□□□ 0.04
TRERNA1-201ENST00000431460 SYNE4Q8N205 404 aa15.31■□□□□ 0.04
TRERNA1-201ENST00000431460 PLBD2Q8NHP8 589 aa15.31■□□□□ 0.04
TRERNA1-201ENST00000431460 CHMP4AQ9BY43 222 aa15.31■□□□□ 0.04
TRERNA1-201ENST00000431460 TAOK3Q9H2K8 898 aa15.31■□□□□ 0.04
TRERNA1-201ENST00000431460 TRMT112Q9UI30 125 aaKnown RBP15.31■□□□□ 0.04
TRERNA1-201ENST00000431460 SBF1O95248 1867 aa15.31■□□□□ 0.04
TRERNA1-201ENST00000431460 HCLS1P14317 486 aaPredicted RBP15.3■□□□□ 0.04
TRERNA1-201ENST00000431460 CCDC93Q567U6 631 aa15.3■□□□□ 0.04
TRERNA1-201ENST00000431460 RTL5Q5HYW3 569 aaPredicted RBP15.3■□□□□ 0.04
TRERNA1-201ENST00000431460 ZBED9Q6R2W3 1325 aa15.3■□□□□ 0.04
TRERNA1-201ENST00000431460 RIC3Q7Z5B4 369 aa15.3■□□□□ 0.04
TRERNA1-201ENST00000431460 CDCA7LQ96GN5 454 aa15.3■□□□□ 0.04
TRERNA1-201ENST00000431460 ALDH1B1P30837 517 aa15.29■□□□□ 0.04
TRERNA1-201ENST00000431460 CRY2Q49AN0 593 aa15.29■□□□□ 0.04
TRERNA1-201ENST00000431460 SOGA3Q5TF21 947 aa15.29■□□□□ 0.04
TRERNA1-201ENST00000431460 CCDC30Q5VVM6 783 aa15.29■□□□□ 0.04
TRERNA1-201ENST00000431460 SLC51AQ86UW1 340 aa15.29■□□□□ 0.04
TRERNA1-201ENST00000431460 FER1L6Q2WGJ9 1857 aa15.29■□□□□ 0.04
TRERNA1-201ENST00000431460 RIC1Q4ADV7 1423 aa15.28■□□□□ 0.04
TRERNA1-201ENST00000431460 KDM2BQ8NHM5 1336 aa15.28■□□□□ 0.04
TRERNA1-201ENST00000431460 KIF3CO14782 793 aa15.28■□□□□ 0.04
TRERNA1-201ENST00000431460 EXOSC9Q06265 439 aaKnown RBP15.28■□□□□ 0.04
TRERNA1-201ENST00000431460 TWISTNBQ3B726 338 aaPredicted RBP15.28■□□□□ 0.04
TRERNA1-201ENST00000431460 NLRP3Q96P20 1036 aa15.28■□□□□ 0.04
TRERNA1-201ENST00000431460 CACNA1FO60840 1977 aa15.27■□□□□ 0.04
TRERNA1-201ENST00000431460 CCDC88AQ3V6T2 1871 aa15.27■□□□□ 0.04
TRERNA1-201ENST00000431460 SH3TC1Q8TE82 1336 aa15.27■□□□□ 0.04
TRERNA1-201ENST00000431460 C7orf43Q8WVR3 580 aa15.27■□□□□ 0.04
TRERNA1-201ENST00000431460 RBM17Q96I25 401 aaKnown RBP15.27■□□□□ 0.04
TRERNA1-201ENST00000431460 MYD88Q99836 296 aa15.27■□□□□ 0.04
TRERNA1-201ENST00000431460 STK31Q9BXU1 1019 aa15.27■□□□□ 0.04
TRERNA1-201ENST00000431460 PPEF1O14829 653 aaPredicted RBP15.26■□□□□ 0.03
TRERNA1-201ENST00000431460 VAMP4O75379 141 aa15.26■□□□□ 0.03
TRERNA1-201ENST00000431460 FAM89AQ96GI7 184 aa15.26■□□□□ 0.03
TRERNA1-201ENST00000431460 ISCA1Q9BUE6 129 aa15.26■□□□□ 0.03
TRERNA1-201ENST00000431460 RRAGCQ9HB90 399 aa15.26■□□□□ 0.03
TRERNA1-201ENST00000431460 ZNF277Q9NRM2 450 aaPredicted RBP15.26■□□□□ 0.03
TRERNA1-201ENST00000431460 RNF123Q5XPI4 1314 aa15.25■□□□□ 0.03
TRERNA1-201ENST00000431460 LTBP3Q9NS15 1303 aa15.25■□□□□ 0.03
TRERNA1-201ENST00000431460 FKBP4Q02790 459 aaKnown RBP eCLIP15.25■□□□□ 0.03
TRERNA1-201ENST00000431460 C16orf71Q8IYS4 520 aaPredicted RBP15.25■□□□□ 0.03
TRERNA1-201ENST00000431460 LAMB2P55268 1798 aa15.24■□□□□ 0.03
TRERNA1-201ENST00000431460 ABCC4O15439 1325 aa15.24■□□□□ 0.03
TRERNA1-201ENST00000431460 ZC3H4Q9UPT8 1303 aaKnown RBP15.24■□□□□ 0.03
TRERNA1-201ENST00000431460 DDX58O95786 925 aaKnown RBP15.24■□□□□ 0.03
TRERNA1-201ENST00000431460 HOXA10P31260 410 aaPredicted RBP15.24■□□□□ 0.03
TRERNA1-201ENST00000431460 SLC10A5Q5PT55 438 aa15.24■□□□□ 0.03
TRERNA1-201ENST00000431460 MAP3K2Q9Y2U5 619 aa15.24■□□□□ 0.03
TRERNA1-201ENST00000431460 G2E3Q7L622 706 aa15.23■□□□□ 0.03
TRERNA1-201ENST00000431460 RTKN2Q8IZC4 609 aa15.23■□□□□ 0.03
TRERNA1-201ENST00000431460 JARID2Q92833 1246 aaPredicted RBP15.23■□□□□ 0.03
TRERNA1-201ENST00000431460 CRAMP1Q96RY5 1269 aa15.23■□□□□ 0.03
TRERNA1-201ENST00000431460 DDX60Q8IY21 1712 aaKnown RBP15.23■□□□□ 0.03
TRERNA1-201ENST00000431460 GLTPD2A6NH11 291 aa15.22■□□□□ 0.03
TRERNA1-201ENST00000431460 SLC4A2P04920 1241 aa15.22■□□□□ 0.03
TRERNA1-201ENST00000431460 CT47B1P0C2W7 299 aaPredicted RBP15.22■□□□□ 0.03
TRERNA1-201ENST00000431460 DDX46Q7L014 1031 aaKnown RBP15.22■□□□□ 0.03
TRERNA1-201ENST00000431460 PI4KAP2A4QPH2 592 aa15.21■□□□□ 0.03
TRERNA1-201ENST00000431460 IRS4O14654 1257 aaPredicted RBP15.21■□□□□ 0.03
TRERNA1-201ENST00000431460 IARSP41252 1262 aaKnown RBP15.21■□□□□ 0.03
TRERNA1-201ENST00000431460 DPY19L2Q6NUT2 758 aa15.21■□□□□ 0.03
TRERNA1-201ENST00000431460 PI4KAP1Q8N8J0 262 aa15.21■□□□□ 0.03
TRERNA1-201ENST00000431460 METTL22Q9BUU2 404 aaPredicted RBP15.21■□□□□ 0.03
TRERNA1-201ENST00000431460 TMX4Q9H1E5 349 aaPredicted RBP15.21■□□□□ 0.03
TRERNA1-201ENST00000431460 SNED1Q8TER0 1413 aa15.2■□□□□ 0.02
TRERNA1-201ENST00000431460 DICER1Q9UPY3 1922 aaKnown RBP15.2■□□□□ 0.02
TRERNA1-201ENST00000431460 TOMM70O94826 608 aa15.2■□□□□ 0.02
TRERNA1-201ENST00000431460 DDNO94850 711 aaPredicted RBP15.2■□□□□ 0.02
TRERNA1-201ENST00000431460 CWC25Q9NXE8 425 aaPredicted RBP15.2■□□□□ 0.02
TRERNA1-201ENST00000431460 ZNF541Q9H0D2 1346 aa15.19■□□□□ 0.02
TRERNA1-201ENST00000431460 FLIIQ13045 1269 aa15.19■□□□□ 0.02
TRERNA1-201ENST00000431460 FKBP5Q13451 457 aaPredicted RBP15.19■□□□□ 0.02
TRERNA1-201ENST00000431460 GRAPQ13588 217 aa15.19■□□□□ 0.02
TRERNA1-201ENST00000431460 CC2D2BQ6DHV5 1058 aa15.19■□□□□ 0.02
TRERNA1-201ENST00000431460 KSR2Q6VAB6 950 aa15.19■□□□□ 0.02
TRERNA1-201ENST00000431460 GRAPLQ8TC17 118 aaPredicted RBP15.19■□□□□ 0.02
TRERNA1-201ENST00000431460 CCDC85AQ96PX6 553 aaPredicted RBP15.19■□□□□ 0.02
TRERNA1-201ENST00000431460 NEXNQ0ZGT2 675 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms