RNA–Protein interactions for RNA: ENST00000431155.1

GRAMD4-204, Transcript of GRAM domain containing 4, humanhuman

TSL 3

Gene GRAMD4, Length 311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4-204ENST00000431155 RIC1Q4ADV7 1423 aa39.29■■■■□ 3.88
GRAMD4-204ENST00000431155 PRELPP51888 382 aa39.28■■■■□ 3.88
GRAMD4-204ENST00000431155 CRY2Q49AN0 593 aa39.28■■■■□ 3.88
GRAMD4-204ENST00000431155 ZNF428Q96B54 188 aa39.28■■■■□ 3.88
GRAMD4-204ENST00000431155 FANCIQ9NVI1 1328 aa39.28■■■■□ 3.88
GRAMD4-204ENST00000431155 ARFGEF2Q9Y6D5 1785 aa39.28■■■■□ 3.88
GRAMD4-204ENST00000431155 TWISTNBQ3B726 338 aaPredicted RBP39.26■■■■□ 3.88
GRAMD4-204ENST00000431155 CHMP4AQ9BY43 222 aa39.26■■■■□ 3.88
GRAMD4-204ENST00000431155 SBF1O95248 1867 aa39.26■■■■□ 3.87
GRAMD4-204ENST00000431155 TCERG1O14776 1098 aaKnown RBP39.24■■■■□ 3.87
GRAMD4-204ENST00000431155 LMNB1P20700 586 aa39.24■■■■□ 3.87
GRAMD4-204ENST00000431155 C3orf67Q6ZVT6 689 aa39.24■■■■□ 3.87
GRAMD4-204ENST00000431155 TRMT112Q9UI30 125 aaKnown RBP39.24■■■■□ 3.87
GRAMD4-204ENST00000431155 ATP5J2-PTCD1G3V325 749 aa39.23■■■■□ 3.87
GRAMD4-204ENST00000431155 ALDH1B1P30837 517 aa39.23■■■■□ 3.87
GRAMD4-204ENST00000431155 GOLGA2Q08379 1002 aa39.23■■■■□ 3.87
GRAMD4-204ENST00000431155 RIC3Q7Z5B4 369 aa39.23■■■■□ 3.87
GRAMD4-204ENST00000431155 C7orf43Q8WVR3 580 aa39.23■■■■□ 3.87
GRAMD4-204ENST00000431155 RPGRQ92834 1020 aaKnown RBP39.23■■■■□ 3.87
GRAMD4-204ENST00000431155 SYNE4Q8N205 404 aa39.22■■■■□ 3.87
GRAMD4-204ENST00000431155 SPINK5Q9NQ38 1064 aaPredicted RBP39.22■■■■□ 3.87
GRAMD4-204ENST00000431155 RNF123Q5XPI4 1314 aa39.21■■■■□ 3.87
GRAMD4-204ENST00000431155 SLC10A5Q5PT55 438 aa39.21■■■■□ 3.87
GRAMD4-204ENST00000431155 ISCA1Q9BUE6 129 aa39.21■■■■□ 3.87
GRAMD4-204ENST00000431155 SOGA3Q5TF21 947 aa39.2■■■■□ 3.87
GRAMD4-204ENST00000431155 NLRP3Q96P20 1036 aa39.2■■■■□ 3.87
GRAMD4-204ENST00000431155 FER1L6Q2WGJ9 1857 aa39.2■■■■□ 3.87
GRAMD4-204ENST00000431155 OLFM4Q6UX06 510 aa39.19■■■■□ 3.86
GRAMD4-204ENST00000431155 HCLS1P14317 486 aaPredicted RBP39.18■■■■□ 3.86
GRAMD4-204ENST00000431155 HOXA10P31260 410 aaPredicted RBP39.18■■■■□ 3.86
GRAMD4-204ENST00000431155 STK31Q9BXU1 1019 aa39.18■■■■□ 3.86
GRAMD4-204ENST00000431155 TAOK3Q9H2K8 898 aa39.18■■■■□ 3.86
GRAMD4-204ENST00000431155 SH3TC1Q8TE82 1336 aa39.17■■■■□ 3.86
GRAMD4-204ENST00000431155 EXOSC9Q06265 439 aaKnown RBP39.16■■■■□ 3.86
GRAMD4-204ENST00000431155 CCDC93Q567U6 631 aa39.16■■■■□ 3.86
GRAMD4-204ENST00000431155 RBM17Q96I25 401 aaKnown RBP39.15■■■■□ 3.86
GRAMD4-204ENST00000431155 LTBP3Q9NS15 1303 aa39.14■■■■□ 3.86
GRAMD4-204ENST00000431155 C1QTNF8P60827 252 aa39.14■■■■□ 3.86
GRAMD4-204ENST00000431155 MYD88Q99836 296 aa39.14■■■■□ 3.86
GRAMD4-204ENST00000431155 CCER2I3L3R5 266 aa39.13■■■■□ 3.85
GRAMD4-204ENST00000431155 DDX58O95786 925 aaKnown RBP39.13■■■■□ 3.85
GRAMD4-204ENST00000431155 CCDC88AQ3V6T2 1871 aa39.12■■■■□ 3.85
GRAMD4-204ENST00000431155 FAM89AQ96GI7 184 aa39.12■■■■□ 3.85
GRAMD4-204ENST00000431155 CRAMP1Q96RY5 1269 aa39.12■■■■□ 3.85
GRAMD4-204ENST00000431155 MYH16Q9H6N6 1097 aa39.12■■■■□ 3.85
GRAMD4-204ENST00000431155 SLC4A2P04920 1241 aa39.11■■■■□ 3.85
GRAMD4-204ENST00000431155 TRIM28Q13263 835 aaKnown RBP39.11■■■■□ 3.85
GRAMD4-204ENST00000431155 ZNF521Q96K83 1311 aa39.11■■■■□ 3.85
GRAMD4-204ENST00000431155 VAMP4O75379 141 aa39.1■■■■□ 3.85
GRAMD4-204ENST00000431155 RTL5Q5HYW3 569 aaPredicted RBP39.1■■■■□ 3.85
GRAMD4-204ENST00000431155 G2E3Q7L622 706 aa39.1■■■■□ 3.85
GRAMD4-204ENST00000431155 NMRK2Q9NPI5 230 aa39.1■■■■□ 3.85
GRAMD4-204ENST00000431155 TIAM2Q8IVF5 1701 aa39.09■■■■□ 3.85
GRAMD4-204ENST00000431155 MAP3K2Q9Y2U5 619 aa39.09■■■■□ 3.85
GRAMD4-204ENST00000431155 ZC3H4Q9UPT8 1303 aaKnown RBP39.09■■■■□ 3.85
GRAMD4-204ENST00000431155 KIF3CO14782 793 aa39.08■■■■□ 3.85
GRAMD4-204ENST00000431155 METTL22Q9BUU2 404 aaPredicted RBP39.08■■■■□ 3.85
GRAMD4-204ENST00000431155 LAMB2P55268 1798 aa39.08■■■■□ 3.85
GRAMD4-204ENST00000431155 SLC51AQ86UW1 340 aa39.07■■■■□ 3.85
GRAMD4-204ENST00000431155 RTKN2Q8IZC4 609 aa39.07■■■■□ 3.85
GRAMD4-204ENST00000431155 KDM2BQ8NHM5 1336 aa39.07■■■■□ 3.84
GRAMD4-204ENST00000431155 PI4KAP2A4QPH2 592 aa39.06■■■■□ 3.84
GRAMD4-204ENST00000431155 PPEF1O14829 653 aaPredicted RBP39.06■■■■□ 3.84
GRAMD4-204ENST00000431155 FKBP4Q02790 459 aaKnown RBP eCLIP39.06■■■■□ 3.84
GRAMD4-204ENST00000431155 KSR2Q6VAB6 950 aa39.06■■■■□ 3.84
GRAMD4-204ENST00000431155 PI4KAP1Q8N8J0 262 aa39.06■■■■□ 3.84
GRAMD4-204ENST00000431155 ABCC4O15439 1325 aa39.05■■■■□ 3.84
GRAMD4-204ENST00000431155 DDX60Q8IY21 1712 aaKnown RBP39.04■■■■□ 3.84
GRAMD4-204ENST00000431155 ZNF277Q9NRM2 450 aaPredicted RBP39.03■■■■□ 3.84
GRAMD4-204ENST00000431155 CCDC191Q8NCU4 936 aa39.02■■■■□ 3.84
GRAMD4-204ENST00000431155 SNED1Q8TER0 1413 aa39.01■■■■□ 3.84
GRAMD4-204ENST00000431155 CC2D2BQ6DHV5 1058 aa39.01■■■■□ 3.84
GRAMD4-204ENST00000431155 ZBTB38Q8NAP3 1195 aaPredicted RBP39.01■■■■□ 3.84
GRAMD4-204ENST00000431155 GLTPD2A6NH11 291 aa39■■■■□ 3.83
GRAMD4-204ENST00000431155 IRS4O14654 1257 aaPredicted RBP39■■■■□ 3.83
GRAMD4-204ENST00000431155 FLIIQ13045 1269 aa39■■■■□ 3.83
GRAMD4-204ENST00000431155 DDX46Q7L014 1031 aaKnown RBP39■■■■□ 3.83
GRAMD4-204ENST00000431155 CWC25Q9NXE8 425 aaPredicted RBP39■■■■□ 3.83
GRAMD4-204ENST00000431155 DICER1Q9UPY3 1922 aaKnown RBP39■■■■□ 3.83
GRAMD4-204ENST00000431155 RRAGCQ9HB90 399 aa38.99■■■■□ 3.83
GRAMD4-204ENST00000431155 DIEXFQ68CQ4 756 aaKnown RBP38.98■■■■□ 3.83
GRAMD4-204ENST00000431155 JARID2Q92833 1246 aaPredicted RBP38.98■■■■□ 3.83
GRAMD4-204ENST00000431155 IGKV5-2P06315 115 aa38.97■■■■□ 3.83
GRAMD4-204ENST00000431155 PSMD1Q99460 953 aa38.96■■■■□ 3.83
GRAMD4-204ENST00000431155 ATP6V0A2Q9Y487 856 aa38.96■■■■□ 3.83
GRAMD4-204ENST00000431155 PCCAP05165 728 aaPredicted RBP38.95■■■■□ 3.83
GRAMD4-204ENST00000431155 NEXNQ0ZGT2 675 aa38.95■■■■□ 3.83
GRAMD4-204ENST00000431155 FKBP5Q13451 457 aaPredicted RBP38.95■■■■□ 3.83
GRAMD4-204ENST00000431155 SF3B3Q15393 1217 aaKnown RBP38.95■■■■□ 3.83
GRAMD4-204ENST00000431155 BBOX1O75936 387 aa38.94■■■■□ 3.82
GRAMD4-204ENST00000431155 GRAPQ13588 217 aa38.94■■■■□ 3.82
GRAMD4-204ENST00000431155 DPY19L2Q6NUT2 758 aa38.94■■■■□ 3.82
GRAMD4-204ENST00000431155 GRAPLQ8TC17 118 aaPredicted RBP38.94■■■■□ 3.82
GRAMD4-204ENST00000431155 IARSP41252 1262 aaKnown RBP38.93■■■■□ 3.82
GRAMD4-204ENST00000431155 CWF19L2Q2TBE0 894 aaKnown RBP38.93■■■■□ 3.82
GRAMD4-204ENST00000431155 TMX4Q9H1E5 349 aaPredicted RBP38.93■■■■□ 3.82
GRAMD4-204ENST00000431155 GRIPAP1Q4V328 841 aa38.92■■■■□ 3.82
GRAMD4-204ENST00000431155 E9PSI1 815 aa38.91■■■■□ 3.82
GRAMD4-204ENST00000431155 MIER1Q8N108 512 aa38.91■■■■□ 3.82
GRAMD4-204ENST00000431155 TAF1P21675 1872 aa38.9■■■■□ 3.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms