RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 ROBO1Q9Y6N7 1651 aa16.92■□□□□ 0.3
HOXC4-202ENST00000430889 TTLL7Q6ZT98 887 aa16.92■□□□□ 0.3
HOXC4-202ENST00000430889 UBE3BQ7Z3V4 1068 aa16.92■□□□□ 0.3
HOXC4-202ENST00000430889 INTS4Q96HW7 963 aaKnown RBP16.92■□□□□ 0.3
HOXC4-202ENST00000430889 TTC14Q96N46 770 aa16.92■□□□□ 0.3
HOXC4-202ENST00000430889 SNX14Q9Y5W7 946 aa16.92■□□□□ 0.3
HOXC4-202ENST00000430889 ATP5J2-PTCD1G3V325 749 aa16.91■□□□□ 0.3
HOXC4-202ENST00000430889 PTCD1O75127 700 aaKnown RBP16.91■□□□□ 0.3
HOXC4-202ENST00000430889 FOXO4P98177 505 aa16.91■□□□□ 0.3
HOXC4-202ENST00000430889 CCDC8Q9H0W5 538 aaPredicted RBP16.91■□□□□ 0.3
HOXC4-202ENST00000430889 STRN4Q9NRL3 753 aa16.91■□□□□ 0.3
HOXC4-202ENST00000430889 A0A087WZG4 1122 aa16.91■□□□□ 0.3
HOXC4-202ENST00000430889 A1BGP04217 495 aa16.91■□□□□ 0.3
HOXC4-202ENST00000430889 CWC27Q6UX04 472 aaKnown RBP16.91■□□□□ 0.3
HOXC4-202ENST00000430889 RUFY2Q8WXA3 655 aa16.91■□□□□ 0.3
HOXC4-202ENST00000430889 SIL1Q9H173 461 aa16.91■□□□□ 0.3
HOXC4-202ENST00000430889 JCADQ9P266 1359 aa16.9■□□□□ 0.3
HOXC4-202ENST00000430889 SKOR2Q2VWA4 1001 aaPredicted RBP16.9■□□□□ 0.3
HOXC4-202ENST00000430889 RASEFQ8IZ41 740 aa16.9■□□□□ 0.3
HOXC4-202ENST00000430889 JARID2Q92833 1246 aaPredicted RBP16.9■□□□□ 0.3
HOXC4-202ENST00000430889 DIAPH3Q9NSV4 1193 aa16.9■□□□□ 0.3
HOXC4-202ENST00000430889 PTH1RQ03431 593 aa16.89■□□□□ 0.29
HOXC4-202ENST00000430889 DDX54Q8TDD1 881 aaKnown RBP16.89■□□□□ 0.29
HOXC4-202ENST00000430889 UPF3BQ9BZI7 483 aaKnown RBP16.89■□□□□ 0.29
HOXC4-202ENST00000430889 MED23Q9ULK4 1368 aa16.89■□□□□ 0.29
HOXC4-202ENST00000430889 EVA1CP58658 441 aa16.88■□□□□ 0.29
HOXC4-202ENST00000430889 L1TD1Q5T7N2 865 aaKnown RBP16.88■□□□□ 0.29
HOXC4-202ENST00000430889 BRPF3Q9ULD4 1205 aa16.88■□□□□ 0.29
HOXC4-202ENST00000430889 RFX7Q2KHR2 1363 aa16.88■□□□□ 0.29
HOXC4-202ENST00000430889 HIP1O00291 1037 aa16.88■□□□□ 0.29
HOXC4-202ENST00000430889 TNNI3KQ59H18 835 aa16.88■□□□□ 0.29
HOXC4-202ENST00000430889 VSIG10Q8N0Z9 540 aa16.88■□□□□ 0.29
HOXC4-202ENST00000430889 CWC25Q9NXE8 425 aaPredicted RBP16.88■□□□□ 0.29
HOXC4-202ENST00000430889 DBNLQ9UJU6 430 aaKnown RBP16.88■□□□□ 0.29
HOXC4-202ENST00000430889 FPGT-TNNI3KV9GXZ4 949 aa16.88■□□□□ 0.29
HOXC4-202ENST00000430889 CCDC171Q6TFL3 1326 aa16.87■□□□□ 0.29
HOXC4-202ENST00000430889 ATP5JP18859 108 aa16.87■□□□□ 0.29
HOXC4-202ENST00000430889 CCDC191Q8NCU4 936 aa16.87■□□□□ 0.29
HOXC4-202ENST00000430889 ISCA1Q9BUE6 129 aa16.87■□□□□ 0.29
HOXC4-202ENST00000430889 ANKRD36CQ5JPF3 1778 aa16.87■□□□□ 0.29
HOXC4-202ENST00000430889 NRAPQ86VF7 1730 aa16.86■□□□□ 0.29
HOXC4-202ENST00000430889 BRD1O95696 1058 aa16.86■□□□□ 0.29
HOXC4-202ENST00000430889 TFCP2Q12800 502 aa16.86■□□□□ 0.29
HOXC4-202ENST00000430889 NECTIN1Q15223 517 aa16.86■□□□□ 0.29
HOXC4-202ENST00000430889 KIAA1211Q6ZU35 1233 aa16.86■□□□□ 0.29
HOXC4-202ENST00000430889 TM6SF1Q9BZW5 370 aa16.86■□□□□ 0.29
HOXC4-202ENST00000430889 GZF1Q9H116 711 aaPredicted RBP16.86■□□□□ 0.29
HOXC4-202ENST00000430889 NMIQ13287 307 aaPredicted RBP16.85■□□□□ 0.29
HOXC4-202ENST00000430889 LMBR1LQ6UX01 489 aa16.85■□□□□ 0.29
HOXC4-202ENST00000430889 ATG9AQ7Z3C6 839 aa16.85■□□□□ 0.29
HOXC4-202ENST00000430889 PIGBQ92521 554 aa16.85■□□□□ 0.29
HOXC4-202ENST00000430889 FAM227BQ96M60 508 aa16.85■□□□□ 0.29
HOXC4-202ENST00000430889 BOLA2Q9H3K6 86 aa16.85■□□□□ 0.29
HOXC4-202ENST00000430889 LMBRD1Q9NUN5 540 aa16.85■□□□□ 0.29
HOXC4-202ENST00000430889 BTG4Q9NY30 223 aa16.85■□□□□ 0.29
HOXC4-202ENST00000430889 TMOD3Q9NYL9 352 aa16.85■□□□□ 0.29
HOXC4-202ENST00000430889 ISY1Q9ULR0 285 aaKnown RBP16.85■□□□□ 0.29
HOXC4-202ENST00000430889 KLHL40Q2TBA0 621 aa16.85■□□□□ 0.29
HOXC4-202ENST00000430889 MAP4K1Q92918 833 aa16.85■□□□□ 0.29
HOXC4-202ENST00000430889 BCL9O00512 1426 aa16.84■□□□□ 0.29
HOXC4-202ENST00000430889 RPAP1Q9BWH6 1393 aaPredicted RBP16.84■□□□□ 0.29
HOXC4-202ENST00000430889 A0A0D9SFI3 127 aa16.84■□□□□ 0.29
HOXC4-202ENST00000430889 GOLGA6L3A6NEY3 463 aa16.84■□□□□ 0.29
HOXC4-202ENST00000430889 GOLGA6L22H0YM25 854 aa16.84■□□□□ 0.29
HOXC4-202ENST00000430889 TRIM28Q13263 835 aaKnown RBP16.84■□□□□ 0.29
HOXC4-202ENST00000430889 GPR108Q9NPR9 543 aa16.84■□□□□ 0.29
HOXC4-202ENST00000430889 ATG3Q9NT62 314 aa16.84■□□□□ 0.29
HOXC4-202ENST00000430889 SPEF2Q9C093 1822 aa16.84■□□□□ 0.29
HOXC4-202ENST00000430889 RUFY3Q7L099 469 aa16.83■□□□□ 0.28
HOXC4-202ENST00000430889 ZBTB3Q9H5J0 574 aa16.83■□□□□ 0.28
HOXC4-202ENST00000430889 ASAP1Q9ULH1 1129 aa16.83■□□□□ 0.28
HOXC4-202ENST00000430889 ZNF609O15014 1411 aa16.83■□□□□ 0.28
HOXC4-202ENST00000430889 DOT1LQ8TEK3 1739 aa16.83■□□□□ 0.28
HOXC4-202ENST00000430889 LTBP4Q8N2S1 1624 aa16.82■□□□□ 0.28
HOXC4-202ENST00000430889 XRCC6P12956 609 aaKnown RBP eCLIP16.82■□□□□ 0.28
HOXC4-202ENST00000430889 AK2P54819 239 aa16.82■□□□□ 0.28
HOXC4-202ENST00000430889 TEX13AQ9BXU3 409 aaPredicted RBP16.82■□□□□ 0.28
HOXC4-202ENST00000430889 ZSWIM6Q9HCJ5 1215 aa16.82■□□□□ 0.28
HOXC4-202ENST00000430889 TCIRG1Q13488 830 aa16.81■□□□□ 0.28
HOXC4-202ENST00000430889 ADCK5Q3MIX3 580 aa16.81■□□□□ 0.28
HOXC4-202ENST00000430889 DNAJC10Q8IXB1 793 aa16.81■□□□□ 0.28
HOXC4-202ENST00000430889 HAUS7Q99871 368 aa16.81■□□□□ 0.28
HOXC4-202ENST00000430889 DBNDD2Q9BQY9 259 aa16.81■□□□□ 0.28
HOXC4-202ENST00000430889 RBM8AQ9Y5S9 174 aaKnown RBP16.81■□□□□ 0.28
HOXC4-202ENST00000430889 MYH3P11055 1940 aa16.81■□□□□ 0.28
HOXC4-202ENST00000430889 CREB3L3Q68CJ9 461 aa16.81■□□□□ 0.28
HOXC4-202ENST00000430889 MCTP1Q6DN14 999 aa16.81■□□□□ 0.28
HOXC4-202ENST00000430889 PRPF40BQ6NWY9 871 aaKnown RBP16.81■□□□□ 0.28
HOXC4-202ENST00000430889 FSD1Q9BTV5 496 aa16.81■□□□□ 0.28
HOXC4-202ENST00000430889 CICQ96RK0 1608 aaPredicted RBP16.81■□□□□ 0.28
HOXC4-202ENST00000430889 NUP98P52948 1817 aa16.8■□□□□ 0.28
HOXC4-202ENST00000430889 CIAO1O76071 339 aa16.8■□□□□ 0.28
HOXC4-202ENST00000430889 VPS53Q5VIR6 699 aa16.8■□□□□ 0.28
HOXC4-202ENST00000430889 NOL8Q76FK4 1167 aaKnown RBP16.8■□□□□ 0.28
HOXC4-202ENST00000430889 EDC3Q96F86 508 aaKnown RBP16.8■□□□□ 0.28
HOXC4-202ENST00000430889 PLA2G12BQ9BX93 195 aa16.8■□□□□ 0.28
HOXC4-202ENST00000430889 LIMCH1Q9UPQ0 1083 aa16.8■□□□□ 0.28
HOXC4-202ENST00000430889 CASTP20810 708 aaKnown RBP16.79■□□□□ 0.28
HOXC4-202ENST00000430889 IL15P40933 162 aaPredicted RBP16.79■□□□□ 0.28
HOXC4-202ENST00000430889 TSGA10IPQ3SY00 556 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms