RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 LTN1O94822 1766 aa17.94■□□□□ 0.46
LINC00839-202ENST00000429940 VPS37CA5D8V6 355 aaPredicted RBP17.93■□□□□ 0.46
LINC00839-202ENST00000429940 C17orf53Q8N3J3 647 aaPredicted RBP17.93■□□□□ 0.46
LINC00839-202ENST00000429940 MTX1Q13505 466 aa17.93■□□□□ 0.46
LINC00839-202ENST00000429940 KCNB2Q92953 911 aa17.93■□□□□ 0.46
LINC00839-202ENST00000429940 KCNQ3O43525 872 aa17.92■□□□□ 0.46
LINC00839-202ENST00000429940 IFIT2P09913 472 aaKnown RBP17.92■□□□□ 0.46
LINC00839-202ENST00000429940 HMGN5P82970 282 aaKnown RBP17.92■□□□□ 0.46
LINC00839-202ENST00000429940 NFAT5O94916 1531 aa17.92■□□□□ 0.46
LINC00839-202ENST00000429940 ZKSCAN1P17029 563 aaPredicted RBP17.92■□□□□ 0.46
LINC00839-202ENST00000429940 ME3Q16798 604 aa17.92■□□□□ 0.46
LINC00839-202ENST00000429940 ARID3AQ99856 593 aa17.92■□□□□ 0.46
LINC00839-202ENST00000429940 SPTLC3Q9NUV7 552 aa17.92■□□□□ 0.46
LINC00839-202ENST00000429940 AXIN2Q9Y2T1 843 aa17.92■□□□□ 0.46
LINC00839-202ENST00000429940 SOS2Q07890 1332 aaPredicted RBP17.92■□□□□ 0.46
LINC00839-202ENST00000429940 ST3GAL1Q11201 340 aa17.91■□□□□ 0.46
LINC00839-202ENST00000429940 NECTIN1Q15223 517 aa17.91■□□□□ 0.46
LINC00839-202ENST00000429940 ERC1Q8IUD2 1116 aa17.91■□□□□ 0.46
LINC00839-202ENST00000429940 KCNH5Q8NCM2 988 aa17.91■□□□□ 0.46
LINC00839-202ENST00000429940 EVI5LQ96CN4 794 aa17.91■□□□□ 0.46
LINC00839-202ENST00000429940 C9orf78Q9NZ63 289 aaPredicted RBP17.91■□□□□ 0.46
LINC00839-202ENST00000429940 TNS3Q68CZ2 1445 aa17.91■□□□□ 0.46
LINC00839-202ENST00000429940 CCDC171Q6TFL3 1326 aa17.91■□□□□ 0.46
LINC00839-202ENST00000429940 NECAB1Q8N987 351 aa17.91■□□□□ 0.46
LINC00839-202ENST00000429940 DDX54Q8TDD1 881 aaKnown RBP17.91■□□□□ 0.46
LINC00839-202ENST00000429940 BTBD11A6QL63 1104 aa17.9■□□□□ 0.46
LINC00839-202ENST00000429940 KCNJ4P48050 445 aa17.9■□□□□ 0.46
LINC00839-202ENST00000429940 TEFQ10587 303 aa17.9■□□□□ 0.46
LINC00839-202ENST00000429940 CHRNA2Q15822 529 aa17.9■□□□□ 0.46
LINC00839-202ENST00000429940 ARHGEF25Q86VW2 580 aa17.9■□□□□ 0.46
LINC00839-202ENST00000429940 PA2G4Q9UQ80 394 aaKnown RBP17.9■□□□□ 0.46
LINC00839-202ENST00000429940 RBM8AQ9Y5S9 174 aaKnown RBP17.9■□□□□ 0.46
LINC00839-202ENST00000429940 ROBO1Q9Y6N7 1651 aa17.9■□□□□ 0.46
LINC00839-202ENST00000429940 AP5Z1O43299 807 aa17.89■□□□□ 0.46
LINC00839-202ENST00000429940 CCDC192P0DO97 292 aa17.89■□□□□ 0.46
LINC00839-202ENST00000429940 AACSQ86V21 672 aa17.89■□□□□ 0.46
LINC00839-202ENST00000429940 NBPF6Q5VWK0 638 aa17.89■□□□□ 0.45
LINC00839-202ENST00000429940 CREB3L3Q68CJ9 461 aa17.89■□□□□ 0.45
LINC00839-202ENST00000429940 NBPF4Q96M43 638 aa17.89■□□□□ 0.45
LINC00839-202ENST00000429940 DBF4Q9UBU7 674 aaPredicted RBP17.89■□□□□ 0.45
LINC00839-202ENST00000429940 TPCN1Q9ULQ1 816 aa17.89■□□□□ 0.45
LINC00839-202ENST00000429940 MAP3K2Q9Y2U5 619 aa17.89■□□□□ 0.45
LINC00839-202ENST00000429940 GTF2F1P35269 517 aaKnown RBP eCLIP17.88■□□□□ 0.45
LINC00839-202ENST00000429940 LARP1BQ659C4 914 aaKnown RBP17.88■□□□□ 0.45
LINC00839-202ENST00000429940 JARID2Q92833 1246 aaPredicted RBP17.88■□□□□ 0.45
LINC00839-202ENST00000429940 ALDH1L1O75891 902 aa17.88■□□□□ 0.45
LINC00839-202ENST00000429940 KRT85P78386 507 aa17.88■□□□□ 0.45
LINC00839-202ENST00000429940 IP6K1Q92551 441 aa17.88■□□□□ 0.45
LINC00839-202ENST00000429940 TPM3P06753 285 aa17.87■□□□□ 0.45
LINC00839-202ENST00000429940 LRRC59Q96AG4 307 aaKnown RBP17.87■□□□□ 0.45
LINC00839-202ENST00000429940 FAM227BQ96M60 508 aa17.87■□□□□ 0.45
LINC00839-202ENST00000429940 LMO7Q8WWI1 1683 aa17.87■□□□□ 0.45
LINC00839-202ENST00000429940 HIP1O00291 1037 aa17.87■□□□□ 0.45
LINC00839-202ENST00000429940 NMIQ13287 307 aaPredicted RBP17.87■□□□□ 0.45
LINC00839-202ENST00000429940 TTC6Q86TZ1 520 aa17.87■□□□□ 0.45
LINC00839-202ENST00000429940 MAP4K1Q92918 833 aa17.87■□□□□ 0.45
LINC00839-202ENST00000429940 HDAC5Q9UQL6 1122 aa17.87■□□□□ 0.45
LINC00839-202ENST00000429940 SLIT3O75094 1523 aa17.87■□□□□ 0.45
LINC00839-202ENST00000429940 RGPD5Q99666 1765 aa17.87■□□□□ 0.45
LINC00839-202ENST00000429940 UBAP1LF5GYI3 381 aa17.86■□□□□ 0.45
LINC00839-202ENST00000429940 PDIA4P13667 645 aaKnown RBP17.86■□□□□ 0.45
LINC00839-202ENST00000429940 PSMA5P28066 241 aa17.86■□□□□ 0.45
LINC00839-202ENST00000429940 CDC37L1Q7L3B6 337 aa17.86■□□□□ 0.45
LINC00839-202ENST00000429940 KIAA1524Q8TCG1 905 aa17.86■□□□□ 0.45
LINC00839-202ENST00000429940 TSC1Q92574 1164 aa17.86■□□□□ 0.45
LINC00839-202ENST00000429940 KCNF1Q9H3M0 494 aa17.86■□□□□ 0.45
LINC00839-202ENST00000429940 GOLGA6L6A8MZA4 724 aa17.86■□□□□ 0.45
LINC00839-202ENST00000429940 SLC27A2O14975 620 aa17.86■□□□□ 0.45
LINC00839-202ENST00000429940 CWF19L2Q2TBE0 894 aaKnown RBP17.86■□□□□ 0.45
LINC00839-202ENST00000429940 AKAP4Q5JQC9 854 aa17.86■□□□□ 0.45
LINC00839-202ENST00000429940 ZNF530Q6P9A1 599 aaPredicted RBP17.86■□□□□ 0.45
LINC00839-202ENST00000429940 MPRIPQ6WCQ1 1025 aa17.86■□□□□ 0.45
LINC00839-202ENST00000429940 FERMT3Q86UX7 667 aa17.86■□□□□ 0.45
LINC00839-202ENST00000429940 SPC24Q8NBT2 197 aa17.86■□□□□ 0.45
LINC00839-202ENST00000429940 CHMP3Q9Y3E7 222 aa17.86■□□□□ 0.45
LINC00839-202ENST00000429940 PDCP20941 246 aa17.85■□□□□ 0.45
LINC00839-202ENST00000429940 MAP3K11Q16584 847 aa17.85■□□□□ 0.45
LINC00839-202ENST00000429940 KSR2Q6VAB6 950 aa17.85■□□□□ 0.45
LINC00839-202ENST00000429940 CCDC94Q9BW85 323 aaPredicted RBP17.85■□□□□ 0.45
LINC00839-202ENST00000429940 NUP62CLQ9H1M0 184 aa17.85■□□□□ 0.45
LINC00839-202ENST00000429940 PYCARDQ9ULZ3 195 aa17.85■□□□□ 0.45
LINC00839-202ENST00000429940 ELP1O95163 1332 aa17.85■□□□□ 0.45
LINC00839-202ENST00000429940 ZNF710Q8N1W2 664 aa17.84■□□□□ 0.45
LINC00839-202ENST00000429940 KIF3AQ9Y496 699 aa17.84■□□□□ 0.45
LINC00839-202ENST00000429940 NHSL1Q5SYE7 1610 aa17.84■□□□□ 0.45
LINC00839-202ENST00000429940 RGPD2P0DJD1 1756 aa17.84■□□□□ 0.45
LINC00839-202ENST00000429940 CAMK4Q16566 473 aa17.84■□□□□ 0.45
LINC00839-202ENST00000429940 PROSER3Q2NL68 480 aa17.84■□□□□ 0.45
LINC00839-202ENST00000429940 FAM200AQ8TCP9 573 aa17.84■□□□□ 0.45
LINC00839-202ENST00000429940 SASH1O94885 1247 aa17.83■□□□□ 0.45
LINC00839-202ENST00000429940 LIG1P18858 919 aa17.83■□□□□ 0.45
LINC00839-202ENST00000429940 ANKRD1Q15327 319 aa17.83■□□□□ 0.45
LINC00839-202ENST00000429940 FAM173BQ6P4H8 233 aa17.83■□□□□ 0.45
LINC00839-202ENST00000429940 BLOC1S2Q6QNY1 142 aa17.83■□□□□ 0.45
LINC00839-202ENST00000429940 EAF2Q96CJ1 260 aaPredicted RBP17.83■□□□□ 0.45
LINC00839-202ENST00000429940 CCDC8Q9H0W5 538 aaPredicted RBP17.83■□□□□ 0.45
LINC00839-202ENST00000429940 TOM1O60784 492 aa17.83■□□□□ 0.44
LINC00839-202ENST00000429940 TYRO3Q06418 890 aa17.83■□□□□ 0.44
LINC00839-202ENST00000429940 G3BP1Q13283 466 aaKnown RBP eCLIP17.83■□□□□ 0.44
LINC00839-202ENST00000429940 COL9A3Q14050 684 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms