RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 HSP90AB4PQ58FF6 505 aa17.79■□□□□ 0.44
CACTIN-203ENST00000429344 KSR2Q6VAB6 950 aa17.79■□□□□ 0.44
CACTIN-203ENST00000429344 RHPN1Q8TCX5 695 aa17.79■□□□□ 0.44
CACTIN-203ENST00000429344 GPATCH3Q96I76 525 aa17.79■□□□□ 0.44
CACTIN-203ENST00000429344 INTS4Q96HW7 963 aaKnown RBP17.79■□□□□ 0.44
CACTIN-203ENST00000429344 LIMCH1Q9UPQ0 1083 aa17.79■□□□□ 0.44
CACTIN-203ENST00000429344 DLG5Q8TDM6 1919 aa17.79■□□□□ 0.44
CACTIN-203ENST00000429344 PPP4R3BQ5MIZ7 849 aa17.79■□□□□ 0.44
CACTIN-203ENST00000429344 KIF1BPQ96EK5 621 aa17.78■□□□□ 0.44
CACTIN-203ENST00000429344 OSBPL3Q9H4L5 887 aa17.78■□□□□ 0.44
CACTIN-203ENST00000429344 SLC52A2Q9HAB3 445 aa17.78■□□□□ 0.44
CACTIN-203ENST00000429344 XRN1Q8IZH2 1706 aaKnown RBP17.78■□□□□ 0.44
CACTIN-203ENST00000429344 RGS12O14924 1447 aa17.78■□□□□ 0.44
CACTIN-203ENST00000429344 PHKG2P15735 406 aa17.78■□□□□ 0.44
CACTIN-203ENST00000429344 FMNL2Q96PY5 1086 aa17.78■□□□□ 0.44
CACTIN-203ENST00000429344 PDRG1Q9NUG6 133 aa17.78■□□□□ 0.44
CACTIN-203ENST00000429344 KIF3AQ9Y496 699 aa17.78■□□□□ 0.44
CACTIN-203ENST00000429344 BRINP3Q76B58 766 aa17.78■□□□□ 0.44
CACTIN-203ENST00000429344 ATP6V1DQ9Y5K8 247 aa17.78■□□□□ 0.44
CACTIN-203ENST00000429344 NRKQ7Z2Y5 1582 aa17.77■□□□□ 0.44
CACTIN-203ENST00000429344 F13A1P00488 732 aa17.77■□□□□ 0.44
CACTIN-203ENST00000429344 HOXB7P09629 217 aa17.77■□□□□ 0.44
CACTIN-203ENST00000429344 ANAPC15P60006 121 aa17.77■□□□□ 0.44
CACTIN-203ENST00000429344 PDE4CQ08493 712 aa17.77■□□□□ 0.44
CACTIN-203ENST00000429344 RUFY3Q7L099 469 aa17.77■□□□□ 0.44
CACTIN-203ENST00000429344 SOS1Q07889 1333 aaPredicted RBP17.77■□□□□ 0.44
CACTIN-203ENST00000429344 KAT6BQ8WYB5 2073 aa17.77■□□□□ 0.44
CACTIN-203ENST00000429344 TOPAZ1Q8N9V7 1692 aa17.77■□□□□ 0.44
CACTIN-203ENST00000429344 UBE2HP62256 183 aa17.77■□□□□ 0.44
CACTIN-203ENST00000429344 LARP1BQ659C4 914 aaKnown RBP17.77■□□□□ 0.43
CACTIN-203ENST00000429344 LARP1Q6PKG0 1096 aaKnown RBP17.77■□□□□ 0.43
CACTIN-203ENST00000429344 ZCRB1Q8TBF4 217 aaKnown RBP17.77■□□□□ 0.43
CACTIN-203ENST00000429344 SNRPA1P09661 255 aaKnown RBP17.76■□□□□ 0.43
CACTIN-203ENST00000429344 AACSQ86V21 672 aa17.76■□□□□ 0.43
CACTIN-203ENST00000429344 FAM184AQ8NB25 1140 aa17.76■□□□□ 0.43
CACTIN-203ENST00000429344 DDX21Q9NR30 783 aaKnown RBP eCLIP17.76■□□□□ 0.43
CACTIN-203ENST00000429344 USP16Q9Y5T5 823 aa17.76■□□□□ 0.43
CACTIN-203ENST00000429344 HSPA4P34932 840 aa17.76■□□□□ 0.43
CACTIN-203ENST00000429344 TERF1P54274 439 aa17.76■□□□□ 0.43
CACTIN-203ENST00000429344 ADCK5Q3MIX3 580 aa17.76■□□□□ 0.43
CACTIN-203ENST00000429344 DCAF5Q96JK2 942 aa17.76■□□□□ 0.43
CACTIN-203ENST00000429344 BEND3Q5T5X7 828 aa17.76■□□□□ 0.43
CACTIN-203ENST00000429344 PYCARDQ9ULZ3 195 aa17.76■□□□□ 0.43
CACTIN-203ENST00000429344 FGD1P98174 961 aa17.75■□□□□ 0.43
CACTIN-203ENST00000429344 MAPK8IP2Q13387 824 aaPredicted RBP17.75■□□□□ 0.43
CACTIN-203ENST00000429344 PIBF1Q8WXW3 757 aa17.75■□□□□ 0.43
CACTIN-203ENST00000429344 KDM4AO75164 1064 aa17.75■□□□□ 0.43
CACTIN-203ENST00000429344 C16orf45Q96MC5 204 aaPredicted RBP17.75■□□□□ 0.43
CACTIN-203ENST00000429344 GRM8O00222 908 aa17.74■□□□□ 0.43
CACTIN-203ENST00000429344 ANKRD13DQ6ZTN6 518 aa17.74■□□□□ 0.43
CACTIN-203ENST00000429344 LUZP1Q86V48 1076 aa17.74■□□□□ 0.43
CACTIN-203ENST00000429344 MYRIPQ8NFW9 859 aa17.74■□□□□ 0.43
CACTIN-203ENST00000429344 BICD2Q8TD16 824 aa17.74■□□□□ 0.43
CACTIN-203ENST00000429344 TRIM5Q9C035 493 aa17.74■□□□□ 0.43
CACTIN-203ENST00000429344 PTH1RQ03431 593 aa17.74■□□□□ 0.43
CACTIN-203ENST00000429344 UBE3BQ7Z3V4 1068 aa17.74■□□□□ 0.43
CACTIN-203ENST00000429344 CCDC8Q9H0W5 538 aaPredicted RBP17.74■□□□□ 0.43
CACTIN-203ENST00000429344 CYP46A1Q9Y6A2 500 aa17.74■□□□□ 0.43
CACTIN-203ENST00000429344 FMN2Q9NZ56 1722 aa17.74■□□□□ 0.43
CACTIN-203ENST00000429344 SPATA31A3Q5VYP0 1347 aa17.74■□□□□ 0.43
CACTIN-203ENST00000429344 ZBTB3Q9H5J0 574 aa17.74■□□□□ 0.43
CACTIN-203ENST00000429344 SGSM2O43147 1006 aa17.73■□□□□ 0.43
CACTIN-203ENST00000429344 ZKSCAN1P17029 563 aaPredicted RBP17.73■□□□□ 0.43
CACTIN-203ENST00000429344 PTGS1P23219 599 aa17.73■□□□□ 0.43
CACTIN-203ENST00000429344 HMGN5P82970 282 aaKnown RBP17.73■□□□□ 0.43
CACTIN-203ENST00000429344 LINS1Q8NG48 757 aa17.73■□□□□ 0.43
CACTIN-203ENST00000429344 CYP27B1O15528 508 aa17.73■□□□□ 0.43
CACTIN-203ENST00000429344 RAB11FIP3O75154 756 aa17.73■□□□□ 0.43
CACTIN-203ENST00000429344 MTERF4Q7Z6M4 381 aaKnown RBP17.73■□□□□ 0.43
CACTIN-203ENST00000429344 KLHDC4Q8TBB5 520 aa17.73■□□□□ 0.43
CACTIN-203ENST00000429344 NALCNQ8IZF0 1738 aa17.72■□□□□ 0.43
CACTIN-203ENST00000429344 CCDC192P0DO97 292 aa17.72■□□□□ 0.43
CACTIN-203ENST00000429344 CEMIPQ8WUJ3 1361 aa17.72■□□□□ 0.43
CACTIN-203ENST00000429344 ADAMTS2O95450 1211 aa17.72■□□□□ 0.43
CACTIN-203ENST00000429344 HSP90B1P14625 803 aaKnown RBP17.72■□□□□ 0.43
CACTIN-203ENST00000429344 A0A087WZG4 1122 aa17.72■□□□□ 0.43
CACTIN-203ENST00000429344 NUTM2BA6NNL0 878 aaPredicted RBP17.72■□□□□ 0.43
CACTIN-203ENST00000429344 GOLGA6L6A8MZA4 724 aa17.72■□□□□ 0.43
CACTIN-203ENST00000429344 NUTM2EB1AL46 878 aaPredicted RBP17.72■□□□□ 0.43
CACTIN-203ENST00000429344 NUTM2AQ8IVF1 878 aaPredicted RBP17.72■□□□□ 0.43
CACTIN-203ENST00000429344 CCDC85AQ96PX6 553 aaPredicted RBP17.72■□□□□ 0.43
CACTIN-203ENST00000429344 NPHP1O15259 732 aa17.71■□□□□ 0.43
CACTIN-203ENST00000429344 PDCL2Q8N4E4 241 aa17.71■□□□□ 0.43
CACTIN-203ENST00000429344 RAD50Q92878 1312 aa17.71■□□□□ 0.43
CACTIN-203ENST00000429344 DDX11Q96FC9 970 aa17.71■□□□□ 0.43
CACTIN-203ENST00000429344 CCDC94Q9BW85 323 aaPredicted RBP17.71■□□□□ 0.43
CACTIN-203ENST00000429344 BICC1Q9H694 974 aaKnown RBP17.71■□□□□ 0.43
CACTIN-203ENST00000429344 RIOK3O14730 519 aaKnown RBP17.71■□□□□ 0.42
CACTIN-203ENST00000429344 ALDH1L1O75891 902 aa17.71■□□□□ 0.42
CACTIN-203ENST00000429344 LRMPQ12912 555 aa17.71■□□□□ 0.42
CACTIN-203ENST00000429344 TNMDQ9H2S6 317 aa17.71■□□□□ 0.42
CACTIN-203ENST00000429344 BOLA2Q9H3K6 86 aa17.71■□□□□ 0.42
CACTIN-203ENST00000429344 PXDNQ92626 1479 aa17.7■□□□□ 0.42
CACTIN-203ENST00000429344 IL2RBP14784 551 aa17.7■□□□□ 0.42
CACTIN-203ENST00000429344 CCDC186Q7Z3E2 898 aa17.7■□□□□ 0.42
CACTIN-203ENST00000429344 SSH3Q8TE77 659 aa17.7■□□□□ 0.42
CACTIN-203ENST00000429344 RUFY2Q8WXA3 655 aa17.7■□□□□ 0.42
CACTIN-203ENST00000429344 NUP62CLQ9H1M0 184 aa17.7■□□□□ 0.42
CACTIN-203ENST00000429344 BCL2L12Q9HB09 334 aa17.7■□□□□ 0.42
CACTIN-203ENST00000429344 NEUROD6Q96NK8 337 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms