RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 PDE6BP35913 854 aa11.51□□□□□ -0.57
HDAC1-202ENST00000428704 RALBP1Q15311 655 aa11.51□□□□□ -0.57
HDAC1-202ENST00000428704 SOGA3Q5TF21 947 aa11.51□□□□□ -0.57
HDAC1-202ENST00000428704 NARFQ9UHQ1 456 aa11.51□□□□□ -0.57
HDAC1-202ENST00000428704 LTBP1Q14766 1721 aa11.51□□□□□ -0.57
HDAC1-202ENST00000428704 DLEC1Q9Y238 1755 aa11.51□□□□□ -0.57
HDAC1-202ENST00000428704 CCDC88AQ3V6T2 1871 aa11.51□□□□□ -0.57
HDAC1-202ENST00000428704 FMR1Q06787 632 aaKnown RBP eCLIP11.5□□□□□ -0.576e-7■□□□□ 8.9
HDAC1-202ENST00000428704 BICDL1Q6ZP65 573 aa11.5□□□□□ -0.57
HDAC1-202ENST00000428704 SOS1Q07889 1333 aaPredicted RBP11.5□□□□□ -0.57
HDAC1-202ENST00000428704 MYH14Q7Z406 1995 aaKnown RBP11.5□□□□□ -0.57
HDAC1-202ENST00000428704 SCN4AP35499 1836 aa11.49□□□□□ -0.57
HDAC1-202ENST00000428704 BRPF1P55201 1214 aaPredicted RBP11.49□□□□□ -0.57
HDAC1-202ENST00000428704 GOLGA2Q08379 1002 aa11.49□□□□□ -0.57
HDAC1-202ENST00000428704 CNGB1Q14028 1251 aaPredicted RBP11.49□□□□□ -0.57
HDAC1-202ENST00000428704 SULT6B1Q6IMI4 303 aa11.49□□□□□ -0.57
HDAC1-202ENST00000428704 CNKSR1Q969H4 720 aa11.49□□□□□ -0.57
HDAC1-202ENST00000428704 BRIP1Q9BX63 1249 aa11.49□□□□□ -0.57
HDAC1-202ENST00000428704 TLL2Q9Y6L7 1015 aa11.49□□□□□ -0.57
HDAC1-202ENST00000428704 COL15A1P39059 1388 aa11.49□□□□□ -0.57
HDAC1-202ENST00000428704 CCDC184Q52MB2 194 aa11.48□□□□□ -0.57
HDAC1-202ENST00000428704 PRPF40BQ6NWY9 871 aaKnown RBP11.48□□□□□ -0.57
HDAC1-202ENST00000428704 DNAJC10Q8IXB1 793 aa11.48□□□□□ -0.57
HDAC1-202ENST00000428704 CCDC24Q8N4L8 307 aa11.48□□□□□ -0.57
HDAC1-202ENST00000428704 NBPF15Q8N660 670 aa11.48□□□□□ -0.57
HDAC1-202ENST00000428704 BCL2L12Q9HB09 334 aa11.48□□□□□ -0.57
HDAC1-202ENST00000428704 MRS2Q9HD23 443 aa11.48□□□□□ -0.57
HDAC1-202ENST00000428704 MRC1P22897 1456 aa11.48□□□□□ -0.57
HDAC1-202ENST00000428704 NRXN2Q9P2S2 1712 aa11.48□□□□□ -0.57
HDAC1-202ENST00000428704 ADAMTSL1Q8N6G6 1762 aa11.48□□□□□ -0.57
HDAC1-202ENST00000428704 DICER1Q9UPY3 1922 aaKnown RBP11.47□□□□□ -0.57
HDAC1-202ENST00000428704 TJP1Q07157 1748 aa11.47□□□□□ -0.57
HDAC1-202ENST00000428704 CCDC93Q567U6 631 aa11.47□□□□□ -0.57
HDAC1-202ENST00000428704 CST9Q5W186 159 aa11.47□□□□□ -0.57
HDAC1-202ENST00000428704 SIPA1L3O60292 1781 aaPredicted RBP11.46□□□□□ -0.57
HDAC1-202ENST00000428704 TRAF5O00463 557 aa11.46□□□□□ -0.57
HDAC1-202ENST00000428704 NPHP1O15259 732 aa11.46□□□□□ -0.57
HDAC1-202ENST00000428704 DIAPH1O60610 1272 aaKnown RBP11.46□□□□□ -0.57
HDAC1-202ENST00000428704 HMOX1P09601 288 aa11.46□□□□□ -0.57
HDAC1-202ENST00000428704 LMOD1P29536 600 aaPredicted RBP11.46□□□□□ -0.57
HDAC1-202ENST00000428704 MKRN3Q13064 507 aaKnown RBP11.46□□□□□ -0.57
HDAC1-202ENST00000428704 PLEKHO1Q53GL0 409 aaPredicted RBP11.46□□□□□ -0.57
HDAC1-202ENST00000428704 CIAPIN1Q6FI81 312 aa11.46□□□□□ -0.57
HDAC1-202ENST00000428704 STYK1Q6J9G0 422 aa11.46□□□□□ -0.57
HDAC1-202ENST00000428704 ZNF530Q6P9A1 599 aaPredicted RBP11.46□□□□□ -0.57
HDAC1-202ENST00000428704 EFCAB3Q8N7B9 438 aa11.46□□□□□ -0.57
HDAC1-202ENST00000428704 NFATC2IPQ8NCF5 419 aa11.46□□□□□ -0.57
HDAC1-202ENST00000428704 ZNF277Q9NRM2 450 aaPredicted RBP11.46□□□□□ -0.57
HDAC1-202ENST00000428704 FER1L6Q2WGJ9 1857 aa11.46□□□□□ -0.58
HDAC1-202ENST00000428704 AFDNP55196 1824 aaKnown RBP11.45□□□□□ -0.58
HDAC1-202ENST00000428704 FKBP4Q02790 459 aaKnown RBP eCLIP11.45□□□□□ -0.58
HDAC1-202ENST00000428704 AMOTQ4VCS5 1084 aa11.45□□□□□ -0.58
HDAC1-202ENST00000428704 HABP4Q5JVS0 413 aaKnown RBP11.45□□□□□ -0.58
HDAC1-202ENST00000428704 IER5LQ5T953 404 aa11.45□□□□□ -0.58
HDAC1-202ENST00000428704 PRR5LQ6MZQ0 368 aa11.45□□□□□ -0.58
HDAC1-202ENST00000428704 SAPCD2Q86UD0 394 aa11.45□□□□□ -0.58
HDAC1-202ENST00000428704 GPC2Q8N158 579 aa11.45□□□□□ -0.58
HDAC1-202ENST00000428704 ZBTB1Q9Y2K1 713 aa11.45□□□□□ -0.58
HDAC1-202ENST00000428704 UBR2Q8IWV8 1755 aa11.44□□□□□ -0.58
HDAC1-202ENST00000428704 MYBBP1AQ9BQG0 1328 aaKnown RBP11.44□□□□□ -0.58
HDAC1-202ENST00000428704 CYP19A1P11511 503 aaPredicted RBP11.44□□□□□ -0.58
HDAC1-202ENST00000428704 PPP2R1AP30153 589 aa11.44□□□□□ -0.58
HDAC1-202ENST00000428704 HNRNPUQ00839 825 aaKnown RBP eCLIP11.44□□□□□ -0.58
HDAC1-202ENST00000428704 C1orf141Q5JVX7 400 aa11.44□□□□□ -0.58
HDAC1-202ENST00000428704 PNISRQ8TF01 805 aaKnown RBP11.44□□□□□ -0.58
HDAC1-202ENST00000428704 BBXQ8WY36 941 aaPredicted RBP11.44□□□□□ -0.58
HDAC1-202ENST00000428704 SLC39A7Q92504 469 aa11.44□□□□□ -0.58
HDAC1-202ENST00000428704 MASTLQ96GX5 879 aa11.44□□□□□ -0.58
HDAC1-202ENST00000428704 GJA3Q9Y6H8 435 aa11.44□□□□□ -0.58
HDAC1-202ENST00000428704 ZBED9Q6R2W3 1325 aa11.43□□□□□ -0.58
HDAC1-202ENST00000428704 SRGNP10124 158 aa11.43□□□□□ -0.58
HDAC1-202ENST00000428704 TBC1D9BQ66K14 1250 aa11.43□□□□□ -0.58
HDAC1-202ENST00000428704 CASP8AP2Q9UKL3 1982 aa11.43□□□□□ -0.58
HDAC1-202ENST00000428704 FZD9O00144 591 aa11.42□□□□□ -0.58
HDAC1-202ENST00000428704 CELF2O95319 508 aaKnown RBP11.42□□□□□ -0.58
HDAC1-202ENST00000428704 CANXP27824 592 aaKnown RBP11.42□□□□□ -0.58
HDAC1-202ENST00000428704 ST5P78524 1137 aa11.42□□□□□ -0.58
HDAC1-202ENST00000428704 CNBD1Q8NA66 436 aa11.42□□□□□ -0.58
HDAC1-202ENST00000428704 HHIPL1Q96JK4 782 aa11.42□□□□□ -0.58
HDAC1-202ENST00000428704 SUPT16HQ9Y5B9 1047 aaKnown RBP11.42□□□□□ -0.58
HDAC1-202ENST00000428704 C7P10643 843 aa11.41□□□□□ -0.58
HDAC1-202ENST00000428704 IARSP41252 1262 aaKnown RBP11.41□□□□□ -0.58
HDAC1-202ENST00000428704 EPS15P42566 896 aa11.41□□□□□ -0.58
HDAC1-202ENST00000428704 EIF6P56537 245 aaKnown RBP11.41□□□□□ -0.58
HDAC1-202ENST00000428704 NOGQ13253 232 aa11.41□□□□□ -0.58
HDAC1-202ENST00000428704 MTHFSDQ2M296 383 aaKnown RBP11.41□□□□□ -0.58
HDAC1-202ENST00000428704 AKAP4Q5JQC9 854 aa11.41□□□□□ -0.58
HDAC1-202ENST00000428704 C7orf43Q8WVR3 580 aa11.41□□□□□ -0.58
HDAC1-202ENST00000428704 JDP2Q8WYK2 163 aa11.41□□□□□ -0.58
HDAC1-202ENST00000428704 DLG5Q8TDM6 1919 aa11.41□□□□□ -0.58
HDAC1-202ENST00000428704 COL11A2P13942 1736 aaPredicted RBP11.4□□□□□ -0.58
HDAC1-202ENST00000428704 A0A087WZG4 1122 aa11.4□□□□□ -0.58
HDAC1-202ENST00000428704 U2SURPO15042 1029 aaKnown RBP11.4□□□□□ -0.58
HDAC1-202ENST00000428704 USP50Q70EL3 339 aaPredicted RBP11.4□□□□□ -0.58
HDAC1-202ENST00000428704 RTKN2Q8IZC4 609 aa11.4□□□□□ -0.58
HDAC1-202ENST00000428704 FAM9BQ8IZU0 186 aa11.4□□□□□ -0.58
HDAC1-202ENST00000428704 ZNF408Q9H9D4 720 aa11.4□□□□□ -0.58
HDAC1-202ENST00000428704 CTU1Q7Z7A3 348 aaKnown RBP11.39□□□□□ -0.59
HDAC1-202ENST00000428704 SYNE4Q8N205 404 aa11.39□□□□□ -0.59
HDAC1-202ENST00000428704 RSPH6AQ9H0K4 717 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms