RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 PDE6BP35913 854 aa18.5■□□□□ 0.55
SGCE-204ENST00000428696 TGFB2P61812 414 aa18.5■□□□□ 0.55
SGCE-204ENST00000428696 CWF19L2Q2TBE0 894 aaKnown RBP18.5■□□□□ 0.55
SGCE-204ENST00000428696 SYNE4Q8N205 404 aa18.5■□□□□ 0.55
SGCE-204ENST00000428696 ZNF622Q969S3 477 aaKnown RBP eCLIP18.5■□□□□ 0.55
SGCE-204ENST00000428696 FAM89AQ96GI7 184 aa18.5■□□□□ 0.55
SGCE-204ENST00000428696 ISCA1Q9BUE6 129 aa18.5■□□□□ 0.55
SGCE-204ENST00000428696 BRIP1Q9BX63 1249 aa18.5■□□□□ 0.55
SGCE-204ENST00000428696 CWC25Q9NXE8 425 aaPredicted RBP18.5■□□□□ 0.55
SGCE-204ENST00000428696 GPR162Q16538 588 aa18.49■□□□□ 0.55
SGCE-204ENST00000428696 HCLS1P14317 486 aaPredicted RBP18.49■□□□□ 0.55
SGCE-204ENST00000428696 CCDC191Q8NCU4 936 aa18.49■□□□□ 0.55
SGCE-204ENST00000428696 BCORQ6W2J9 1755 aa18.48■□□□□ 0.55
SGCE-204ENST00000428696 PTPRCP08575 1304 aa18.48■□□□□ 0.55
SGCE-204ENST00000428696 SH3TC1Q8TE82 1336 aa18.48■□□□□ 0.55
SGCE-204ENST00000428696 NTSR2O95665 410 aa18.48■□□□□ 0.55
SGCE-204ENST00000428696 NUP98P52948 1817 aa18.47■□□□□ 0.55
SGCE-204ENST00000428696 IPO8O15397 1037 aaKnown RBP18.47■□□□□ 0.55
SGCE-204ENST00000428696 IGKV5-2P06315 115 aa18.47■□□□□ 0.55
SGCE-204ENST00000428696 TRIM28Q13263 835 aaKnown RBP18.47■□□□□ 0.55
SGCE-204ENST00000428696 LINS1Q8NG48 757 aa18.47■□□□□ 0.55
SGCE-204ENST00000428696 C10orf71Q711Q0 1435 aa18.46■□□□□ 0.55
SGCE-204ENST00000428696 NEURL1BA8MQ27 555 aa18.46■□□□□ 0.55
SGCE-204ENST00000428696 NLRP3Q96P20 1036 aa18.46■□□□□ 0.55
SGCE-204ENST00000428696 BCS1LQ9Y276 419 aa18.46■□□□□ 0.55
SGCE-204ENST00000428696 COL24A1Q17RW2 1714 aa18.45■□□□□ 0.54
SGCE-204ENST00000428696 ZBTB38Q8NAP3 1195 aaPredicted RBP18.45■□□□□ 0.54
SGCE-204ENST00000428696 API5Q9BZZ5 524 aaKnown RBP18.45■□□□□ 0.54
SGCE-204ENST00000428696 SRCIN1Q9C0H9 1055 aa18.45■□□□□ 0.54
SGCE-204ENST00000428696 PIM2Q9P1W9 311 aa18.45■□□□□ 0.54
SGCE-204ENST00000428696 ZNF219Q9P2Y4 722 aaPredicted RBP18.45■□□□□ 0.54
SGCE-204ENST00000428696 RCAN3Q9UKA8 241 aa18.45■□□□□ 0.54
SGCE-204ENST00000428696 KIF16BQ96L93 1317 aa18.44■□□□□ 0.54
SGCE-204ENST00000428696 IRS4O14654 1257 aaPredicted RBP18.44■□□□□ 0.54
SGCE-204ENST00000428696 BEND3Q5T5X7 828 aa18.44■□□□□ 0.54
SGCE-204ENST00000428696 RPGRQ92834 1020 aaKnown RBP18.44■□□□□ 0.54
SGCE-204ENST00000428696 C9orf78Q9NZ63 289 aaPredicted RBP18.44■□□□□ 0.54
SGCE-204ENST00000428696 ABCC12Q96J65 1359 aa18.44■□□□□ 0.54
SGCE-204ENST00000428696 GCKRQ14397 625 aa18.43■□□□□ 0.54
SGCE-204ENST00000428696 UBE3BQ7Z3V4 1068 aa18.43■□□□□ 0.54
SGCE-204ENST00000428696 CLUAP1Q96AJ1 413 aa18.43■□□□□ 0.54
SGCE-204ENST00000428696 PCCAP05165 728 aaPredicted RBP18.42■□□□□ 0.54
SGCE-204ENST00000428696 KCNA3P22001 575 aa18.42■□□□□ 0.54
SGCE-204ENST00000428696 DALRD3Q5D0E6 543 aaKnown RBP18.42■□□□□ 0.54
SGCE-204ENST00000428696 AFDNP55196 1824 aaKnown RBP18.42■□□□□ 0.54
SGCE-204ENST00000428696 SLC10A5Q5PT55 438 aa18.41■□□□□ 0.54
SGCE-204ENST00000428696 ZKSCAN2Q63HK3 967 aa18.41■□□□□ 0.54
SGCE-204ENST00000428696 C3orf67Q6ZVT6 689 aa18.41■□□□□ 0.54
SGCE-204ENST00000428696 MASTLQ96GX5 879 aa18.41■□□□□ 0.54
SGCE-204ENST00000428696 CCDC85AQ96PX6 553 aaPredicted RBP18.41■□□□□ 0.54
SGCE-204ENST00000428696 PDZRN3Q9UPQ7 1066 aa18.41■□□□□ 0.54
SGCE-204ENST00000428696 ARFGEF2Q9Y6D5 1785 aa18.41■□□□□ 0.54
SGCE-204ENST00000428696 RNF123Q5XPI4 1314 aa18.41■□□□□ 0.54
SGCE-204ENST00000428696 PXDNLA1KZ92 1463 aa18.41■□□□□ 0.54
SGCE-204ENST00000428696 SRGNP10124 158 aa18.4■□□□□ 0.54
SGCE-204ENST00000428696 HSP90B1P14625 803 aaKnown RBP18.4■□□□□ 0.54
SGCE-204ENST00000428696 NPR1P16066 1061 aa18.4■□□□□ 0.54
SGCE-204ENST00000428696 TTLL6Q8N841 843 aa18.4■□□□□ 0.54
SGCE-204ENST00000428696 IBTKQ9P2D0 1353 aaPredicted RBP18.4■□□□□ 0.54
SGCE-204ENST00000428696 BRPF1P55201 1214 aaPredicted RBP18.4■□□□□ 0.54
SGCE-204ENST00000428696 ATF7IPQ6VMQ6 1270 aa18.4■□□□□ 0.54
SGCE-204ENST00000428696 FTSJ3Q8IY81 847 aaKnown RBP18.4■□□□□ 0.54
SGCE-204ENST00000428696 RBM17Q96I25 401 aaKnown RBP18.4■□□□□ 0.54
SGCE-204ENST00000428696 TNNQ9UQP3 1299 aa18.4■□□□□ 0.54
SGCE-204ENST00000428696 H7C1W4 665 aa18.39■□□□□ 0.53
SGCE-204ENST00000428696 ALDH1L1O75891 902 aa18.39■□□□□ 0.53
SGCE-204ENST00000428696 CCT4P50991 539 aaKnown RBP18.39■□□□□ 0.53
SGCE-204ENST00000428696 STYK1Q6J9G0 422 aa18.39■□□□□ 0.53
SGCE-204ENST00000428696 ARHGAP45Q92619 1136 aa18.39■□□□□ 0.53
SGCE-204ENST00000428696 CNKSR1Q969H4 720 aa18.39■□□□□ 0.53
SGCE-204ENST00000428696 CACNA1FO60840 1977 aa18.38■□□□□ 0.53
SGCE-204ENST00000428696 GRM8O00222 908 aa18.38■□□□□ 0.53
SGCE-204ENST00000428696 PDE8AO60658 829 aa18.38■□□□□ 0.53
SGCE-204ENST00000428696 YBX3P16989 372 aaKnown RBP eCLIP18.38■□□□□ 0.53
SGCE-204ENST00000428696 ARHGAP27Q6ZUM4 889 aa18.38■□□□□ 0.53
SGCE-204ENST00000428696 DDX46Q7L014 1031 aaKnown RBP18.38■□□□□ 0.53
SGCE-204ENST00000428696 PLIN1O60240 522 aa18.37■□□□□ 0.53
SGCE-204ENST00000428696 TRIM27P14373 513 aa18.37■□□□□ 0.53
SGCE-204ENST00000428696 ALDH1B1P30837 517 aa18.37■□□□□ 0.53
SGCE-204ENST00000428696 CHMP3Q9Y3E7 222 aa18.37■□□□□ 0.53
SGCE-204ENST00000428696 GOLGB1Q14789 3259 aaKnown RBP18.37■□□□□ 0.53
SGCE-204ENST00000428696 NRXN2Q9P2S2 1712 aa18.37■□□□□ 0.53
SGCE-204ENST00000428696 N4BP2Q86UW6 1770 aaPredicted RBP18.36■□□□□ 0.53
SGCE-204ENST00000428696 KLRG2A4D1S0 409 aaPredicted RBP18.36■□□□□ 0.53
SGCE-204ENST00000428696 C21orf2O43822 256 aa18.36■□□□□ 0.53
SGCE-204ENST00000428696 ANKRD36CQ5JPF3 1778 aa18.36■□□□□ 0.53
SGCE-204ENST00000428696 CRY2Q49AN0 593 aa18.35■□□□□ 0.53
SGCE-204ENST00000428696 PRPF40BQ6NWY9 871 aaKnown RBP18.35■□□□□ 0.53
SGCE-204ENST00000428696 GRIN3BO60391 1043 aa18.34■□□□□ 0.53
SGCE-204ENST00000428696 NBPF7P0C2Y1 421 aaPredicted RBP18.34■□□□□ 0.53
SGCE-204ENST00000428696 CCDC152Q4G0S7 254 aa18.34■□□□□ 0.53
SGCE-204ENST00000428696 DZIP1LQ8IYY4 767 aaKnown RBP18.34■□□□□ 0.53
SGCE-204ENST00000428696 TMX4Q9H1E5 349 aaPredicted RBP18.34■□□□□ 0.53
SGCE-204ENST00000428696 CTSWP56202 376 aa18.33■□□□□ 0.53
SGCE-204ENST00000428696 CDHR2Q9BYE9 1310 aa18.33■□□□□ 0.52
SGCE-204ENST00000428696 SF3B3Q15393 1217 aaKnown RBP18.32■□□□□ 0.52
SGCE-204ENST00000428696 ITPRIPQ8IWB1 547 aa18.32■□□□□ 0.52
SGCE-204ENST00000428696 TMEM57Q8N5G2 664 aa18.32■□□□□ 0.52
SGCE-204ENST00000428696 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.32■□□□□ 0.52
SGCE-204ENST00000428696 CRAMP1Q96RY5 1269 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 651.1 ms