RNA–Protein interactions for RNA: ENST00000428650.5

STRC-201, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 5,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-201ENST00000428650 PPP1R42Q7Z4L9 355 aa16.58■□□□□ 0.25
STRC-201ENST00000428650 SMC5Q8IY18 1101 aa16.58■□□□□ 0.25
STRC-201ENST00000428650 KRT23Q9C075 422 aa16.58■□□□□ 0.25
STRC-201ENST00000428650 MAP3K2Q9Y2U5 619 aa16.58■□□□□ 0.25
STRC-201ENST00000428650 USP16Q9Y5T5 823 aa16.58■□□□□ 0.25
STRC-201ENST00000428650 F6X3S4 739 aa16.58■□□□□ 0.24
STRC-201ENST00000428650 DZIP1Q86YF9 867 aaKnown RBP16.58■□□□□ 0.24
STRC-201ENST00000428650 CDC5LQ99459 802 aaKnown RBP16.58■□□□□ 0.24
STRC-201ENST00000428650 NLRP5P59047 1200 aa16.58■□□□□ 0.24
STRC-201ENST00000428650 FAM193AP78312 1265 aa16.58■□□□□ 0.24
STRC-201ENST00000428650 ATL3Q6DD88 541 aa16.58■□□□□ 0.24
STRC-201ENST00000428650 FAM200AQ8TCP9 573 aa16.58■□□□□ 0.24
STRC-201ENST00000428650 URB2Q14146 1524 aaKnown RBP16.58■□□□□ 0.24
STRC-201ENST00000428650 ATP8B2P98198 1209 aa16.58■□□□□ 0.24
STRC-201ENST00000428650 TAX1BP1Q86VP1 789 aa16.58■□□□□ 0.24
STRC-201ENST00000428650 ESYT1Q9BSJ8 1104 aa16.58■□□□□ 0.24
STRC-201ENST00000428650 AMOTL2Q9Y2J4 779 aa16.57■□□□□ 0.24
STRC-201ENST00000428650 SNRPA1P09661 255 aaKnown RBP16.57■□□□□ 0.24
STRC-201ENST00000428650 PDE4BQ07343 736 aa16.57■□□□□ 0.24
STRC-201ENST00000428650 PPP4R3AQ6IN85 833 aa16.57■□□□□ 0.24
STRC-201ENST00000428650 MRPL50Q8N5N7 158 aaKnown RBP16.57■□□□□ 0.24
STRC-201ENST00000428650 ORC3Q9UBD5 711 aaPredicted RBP16.57■□□□□ 0.24
STRC-201ENST00000428650 KLHL34Q8N239 644 aa16.57■□□□□ 0.24
STRC-201ENST00000428650 RBM27Q9P2N5 1060 aaKnown RBP16.57■□□□□ 0.24
STRC-201ENST00000428650 CTTNBP2Q8WZ74 1663 aa16.57■□□□□ 0.24
STRC-201ENST00000428650 CCDC172P0C7W6 258 aa16.57■□□□□ 0.24
STRC-201ENST00000428650 METAP2P50579 478 aaKnown RBP eCLIP16.56■□□□□ 0.24
STRC-201ENST00000428650 RBM5P52756 815 aaKnown RBP eCLIP16.56■□□□□ 0.24
STRC-201ENST00000428650 PDE1AP54750 535 aa16.56■□□□□ 0.24
STRC-201ENST00000428650 SMC1AQ14683 1233 aaKnown RBP16.56■□□□□ 0.24
STRC-201ENST00000428650 TMC6Q7Z403 805 aa16.56■□□□□ 0.24
STRC-201ENST00000428650 MPNDQ8N594 471 aa16.56■□□□□ 0.24
STRC-201ENST00000428650 MINDY4BA8MYZ0 360 aa16.56■□□□□ 0.24
STRC-201ENST00000428650 XPCQ01831 940 aaPredicted RBP16.56■□□□□ 0.24
STRC-201ENST00000428650 ZSCAN29Q8IWY8 852 aaPredicted RBP16.56■□□□□ 0.24
STRC-201ENST00000428650 DCAF8L1A6NGE4 600 aa16.56■□□□□ 0.24
STRC-201ENST00000428650 RBM25P49756 843 aaKnown RBP16.56■□□□□ 0.24
STRC-201ENST00000428650 CEP135Q66GS9 1140 aa16.56■□□□□ 0.24
STRC-201ENST00000428650 TRMT112Q9UI30 125 aaKnown RBP16.56■□□□□ 0.24
STRC-201ENST00000428650 MPHOSPH10O00566 681 aaKnown RBP16.56■□□□□ 0.24
STRC-201ENST00000428650 SDSP20132 328 aa16.56■□□□□ 0.24
STRC-201ENST00000428650 GOLGA6L10A0A0M3HER8 536 aa16.55■□□□□ 0.24
STRC-201ENST00000428650 TMEM67Q5HYA8 995 aa16.55■□□□□ 0.24
STRC-201ENST00000428650 ZPR1O75312 459 aa16.55■□□□□ 0.24
STRC-201ENST00000428650 CKAP2LQ8IYA6 745 aa16.55■□□□□ 0.24
STRC-201ENST00000428650 TUBBP07437 444 aa16.55■□□□□ 0.24
STRC-201ENST00000428650 ZC3H6P61129 1189 aaKnown RBP16.55■□□□□ 0.24
STRC-201ENST00000428650 GSTO1P78417 241 aa16.55■□□□□ 0.24
STRC-201ENST00000428650 MFSD6Q6ZSS7 791 aa16.55■□□□□ 0.24
STRC-201ENST00000428650 STK11IPQ8N1F8 1099 aa16.55■□□□□ 0.24
STRC-201ENST00000428650 BAG3O95817 575 aa16.54■□□□□ 0.24
STRC-201ENST00000428650 MAP2K1Q02750 393 aaPredicted RBP16.54■□□□□ 0.24
STRC-201ENST00000428650 NBPF7P0C2Y1 421 aaPredicted RBP16.54■□□□□ 0.24
STRC-201ENST00000428650 KLHL10Q6JEL2 608 aa16.54■□□□□ 0.24
STRC-201ENST00000428650 ANKRD62A6NC57 917 aa16.54■□□□□ 0.24
STRC-201ENST00000428650 POLR3GO15318 223 aaPredicted RBP16.54■□□□□ 0.24
STRC-201ENST00000428650 MTIF2P46199 727 aaKnown RBP16.54■□□□□ 0.24
STRC-201ENST00000428650 GNAQP50148 359 aa16.54■□□□□ 0.24
STRC-201ENST00000428650 BABAM1Q9NWV8 329 aa16.54■□□□□ 0.24
STRC-201ENST00000428650 NUTM2BA6NNL0 878 aaPredicted RBP16.54■□□□□ 0.24
STRC-201ENST00000428650 NUTM2EB1AL46 878 aaPredicted RBP16.54■□□□□ 0.24
STRC-201ENST00000428650 RANBP6O60518 1105 aaKnown RBP16.54■□□□□ 0.24
STRC-201ENST00000428650 GIGYF2Q6Y7W6 1299 aaKnown RBP16.54■□□□□ 0.24
STRC-201ENST00000428650 NUTM2AQ8IVF1 878 aaPredicted RBP16.54■□□□□ 0.24
STRC-201ENST00000428650 CRACR2BQ8N4Y2 399 aaPredicted RBP16.53■□□□□ 0.24
STRC-201ENST00000428650 MRPS27Q92552 414 aaKnown RBP16.53■□□□□ 0.24
STRC-201ENST00000428650 SMARCC1Q92922 1105 aaPredicted RBP16.53■□□□□ 0.24
STRC-201ENST00000428650 RAB3GAP1Q15042 981 aa16.53■□□□□ 0.24
STRC-201ENST00000428650 DYDC1Q8WWB3 177 aa16.53■□□□□ 0.24
STRC-201ENST00000428650 IFFO1Q0D2I5 559 aa16.53■□□□□ 0.24
STRC-201ENST00000428650 MPRIPQ6WCQ1 1025 aa16.52■□□□□ 0.24
STRC-201ENST00000428650 PHF23Q9BUL5 403 aaPredicted RBP16.52■□□□□ 0.24
STRC-201ENST00000428650 DCTPP1Q9H773 170 aa16.52■□□□□ 0.24
STRC-201ENST00000428650 C8orf34Q49A92 452 aa16.52■□□□□ 0.24
STRC-201ENST00000428650 C16orf45Q96MC5 204 aaPredicted RBP16.52■□□□□ 0.24
STRC-201ENST00000428650 F13A1P00488 732 aa16.52■□□□□ 0.24
STRC-201ENST00000428650 SYKP43405 635 aa16.52■□□□□ 0.24
STRC-201ENST00000428650 CYLC1P35663 651 aaPredicted RBP16.52■□□□□ 0.23
STRC-201ENST00000428650 PI4KAP2A4QPH2 592 aa16.51■□□□□ 0.23
STRC-201ENST00000428650 MCMDC2Q4G0Z9 681 aa16.51■□□□□ 0.23
STRC-201ENST00000428650 PI4KAP1Q8N8J0 262 aa16.51■□□□□ 0.23
STRC-201ENST00000428650 KIF21AQ7Z4S6 1674 aa16.51■□□□□ 0.23
STRC-201ENST00000428650 ACEP12821 1306 aa16.51■□□□□ 0.23
STRC-201ENST00000428650 IL15P40933 162 aaPredicted RBP16.51■□□□□ 0.23
STRC-201ENST00000428650 UBA7P41226 1012 aa16.51■□□□□ 0.23
STRC-201ENST00000428650 ZGPATQ8N5A5 531 aaKnown RBP16.51■□□□□ 0.23
STRC-201ENST00000428650 ZKSCAN5Q9Y2L8 839 aa16.51■□□□□ 0.23
STRC-201ENST00000428650 ZNF518AQ6AHZ1 1483 aa16.51■□□□□ 0.23
STRC-201ENST00000428650 KAT14Q9H8E8 782 aa16.51■□□□□ 0.23
STRC-201ENST00000428650 A2MP01023 1474 aa16.51■□□□□ 0.23
STRC-201ENST00000428650 CALM1P0DP23 149 aa16.51■□□□□ 0.23
STRC-201ENST00000428650 CALM2P0DP24 149 aa16.51■□□□□ 0.23
STRC-201ENST00000428650 CALM3P0DP25 149 aa16.51■□□□□ 0.23
STRC-201ENST00000428650 AOX1Q06278 1338 aa16.5■□□□□ 0.23
STRC-201ENST00000428650 TDRD12Q587J7 1177 aaKnown RBP16.5■□□□□ 0.23
STRC-201ENST00000428650 GIMAP7Q8NHV1 300 aa16.5■□□□□ 0.23
STRC-201ENST00000428650 BBXQ8WY36 941 aaPredicted RBP16.5■□□□□ 0.23
STRC-201ENST00000428650 CRNKL1Q9BZJ0 848 aaKnown RBP16.5■□□□□ 0.23
STRC-201ENST00000428650 TNRQ92752 1358 aa16.5■□□□□ 0.23
STRC-201ENST00000428650 MATR3P43243 847 aaKnown RBP eCLIP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms