RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 H7C1W4 665 aa16.83■□□□□ 0.28
NCBP2-205ENST00000428425 MCCP23508 829 aa16.83■□□□□ 0.28
NCBP2-205ENST00000428425 FOXO4P98177 505 aa16.83■□□□□ 0.28
NCBP2-205ENST00000428425 TFCP2Q12800 502 aa16.83■□□□□ 0.28
NCBP2-205ENST00000428425 LMBR1LQ6UX01 489 aa16.83■□□□□ 0.28
NCBP2-205ENST00000428425 ILDR2Q71H61 639 aa16.83■□□□□ 0.28
NCBP2-205ENST00000428425 ATG3Q9NT62 314 aa16.83■□□□□ 0.28
NCBP2-205ENST00000428425 ZNF330Q9Y3S2 320 aaPredicted RBP16.83■□□□□ 0.28
NCBP2-205ENST00000428425 ITGB4P16144 1822 aa16.83■□□□□ 0.28
NCBP2-205ENST00000428425 GPATCH3Q96I76 525 aa16.82■□□□□ 0.28
NCBP2-205ENST00000428425 BOLA2Q9H3K6 86 aa16.82■□□□□ 0.28
NCBP2-205ENST00000428425 COL15A1P39059 1388 aa16.82■□□□□ 0.28
NCBP2-205ENST00000428425 ANAPC15P60006 121 aa16.82■□□□□ 0.28
NCBP2-205ENST00000428425 RASEFQ8IZ41 740 aa16.82■□□□□ 0.28
NCBP2-205ENST00000428425 PTH1RQ03431 593 aa16.81■□□□□ 0.28
NCBP2-205ENST00000428425 IL17RAQ96F46 866 aa16.81■□□□□ 0.28
NCBP2-205ENST00000428425 EDC3Q96F86 508 aaKnown RBP16.81■□□□□ 0.28
NCBP2-205ENST00000428425 TMX3Q96JJ7 454 aa16.81■□□□□ 0.28
NCBP2-205ENST00000428425 GZF1Q9H116 711 aaPredicted RBP16.81■□□□□ 0.28
NCBP2-205ENST00000428425 DIAPH3Q9NSV4 1193 aa16.81■□□□□ 0.28
NCBP2-205ENST00000428425 CWC25Q9NXE8 425 aaPredicted RBP16.81■□□□□ 0.28
NCBP2-205ENST00000428425 DBNLQ9UJU6 430 aaKnown RBP16.81■□□□□ 0.28
NCBP2-205ENST00000428425 NDUFB9Q9Y6M9 179 aa16.81■□□□□ 0.28
NCBP2-205ENST00000428425 TRAK2O60296 914 aa16.81■□□□□ 0.28
NCBP2-205ENST00000428425 FAM227BQ96M60 508 aa16.81■□□□□ 0.28
NCBP2-205ENST00000428425 SLC4A9Q96Q91 983 aa16.81■□□□□ 0.28
NCBP2-205ENST00000428425 CHMP3Q9Y3E7 222 aa16.81■□□□□ 0.28
NCBP2-205ENST00000428425 KAT6BQ8WYB5 2073 aa16.81■□□□□ 0.28
NCBP2-205ENST00000428425 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.8■□□□□ 0.28
NCBP2-205ENST00000428425 COL22A1Q8NFW1 1626 aaPredicted RBP16.8■□□□□ 0.28
NCBP2-205ENST00000428425 EVI5LQ96CN4 794 aa16.8■□□□□ 0.28
NCBP2-205ENST00000428425 SNX14Q9Y5W7 946 aa16.8■□□□□ 0.28
NCBP2-205ENST00000428425 TNNI3KQ59H18 835 aa16.79■□□□□ 0.28
NCBP2-205ENST00000428425 RGS17Q9UGC6 210 aaPredicted RBP16.79■□□□□ 0.28
NCBP2-205ENST00000428425 FPGT-TNNI3KV9GXZ4 949 aa16.79■□□□□ 0.28
NCBP2-205ENST00000428425 ADAMTS2O95450 1211 aa16.78■□□□□ 0.28
NCBP2-205ENST00000428425 CYP2E1P05181 493 aaPredicted RBP16.78■□□□□ 0.28
NCBP2-205ENST00000428425 DDX11L8A8MPP1 907 aa16.78■□□□□ 0.28
NCBP2-205ENST00000428425 NMIQ13287 307 aaPredicted RBP16.78■□□□□ 0.28
NCBP2-205ENST00000428425 ZNF594Q96JF6 807 aaPredicted RBP16.78■□□□□ 0.28
NCBP2-205ENST00000428425 DBNDD2Q9BQY9 259 aa16.78■□□□□ 0.28
NCBP2-205ENST00000428425 A0A0D9SFI3 127 aa16.77■□□□□ 0.28
NCBP2-205ENST00000428425 CHGBP05060 677 aa16.77■□□□□ 0.28
NCBP2-205ENST00000428425 CPA1P15085 419 aa16.77■□□□□ 0.28
NCBP2-205ENST00000428425 ZDHHC9Q9Y397 364 aa16.77■□□□□ 0.28
NCBP2-205ENST00000428425 CCDC9Q9Y3X0 531 aaKnown RBP16.77■□□□□ 0.28
NCBP2-205ENST00000428425 PLCH1Q4KWH8 1693 aa16.77■□□□□ 0.28
NCBP2-205ENST00000428425 BCL9O00512 1426 aa16.77■□□□□ 0.28
NCBP2-205ENST00000428425 EPB41L2O43491 1005 aaKnown RBP16.77■□□□□ 0.27
NCBP2-205ENST00000428425 ATG9AQ7Z3C6 839 aa16.77■□□□□ 0.27
NCBP2-205ENST00000428425 CCDC191Q8NCU4 936 aa16.77■□□□□ 0.27
NCBP2-205ENST00000428425 SYTL4Q96C24 671 aaPredicted RBP16.77■□□□□ 0.27
NCBP2-205ENST00000428425 CHAMP1Q96JM3 812 aa16.77■□□□□ 0.27
NCBP2-205ENST00000428425 GBP4Q96PP9 640 aa16.77■□□□□ 0.27
NCBP2-205ENST00000428425 KIAA1211Q6ZU35 1233 aa16.76■□□□□ 0.27
NCBP2-205ENST00000428425 LARP6Q9BRS8 491 aaKnown RBP16.76■□□□□ 0.27
NCBP2-205ENST00000428425 ISCA1Q9BUE6 129 aa16.76■□□□□ 0.27
NCBP2-205ENST00000428425 FSD1Q9BTV5 496 aa16.76■□□□□ 0.27
NCBP2-205ENST00000428425 WNK3Q9BYP7 1800 aa16.75■□□□□ 0.27
NCBP2-205ENST00000428425 BAG4O95429 457 aaKnown RBP16.75■□□□□ 0.27
NCBP2-205ENST00000428425 COL9A3Q14050 684 aaPredicted RBP16.75■□□□□ 0.27
NCBP2-205ENST00000428425 LRRC24Q50LG9 513 aa16.75■□□□□ 0.27
NCBP2-205ENST00000428425 ARXQ96QS3 562 aa16.75■□□□□ 0.27
NCBP2-205ENST00000428425 TCIRG1Q13488 830 aa16.74■□□□□ 0.27
NCBP2-205ENST00000428425 CUL4AQ13619 759 aa16.74■□□□□ 0.27
NCBP2-205ENST00000428425 ADCK5Q3MIX3 580 aa16.74■□□□□ 0.27
NCBP2-205ENST00000428425 PRPF40BQ6NWY9 871 aaKnown RBP16.74■□□□□ 0.27
NCBP2-205ENST00000428425 VSIG10Q8N0Z9 540 aa16.74■□□□□ 0.27
NCBP2-205ENST00000428425 SYNE4Q8N205 404 aa16.74■□□□□ 0.27
NCBP2-205ENST00000428425 RUFY2Q8WXA3 655 aa16.74■□□□□ 0.27
NCBP2-205ENST00000428425 EXOC5O00471 708 aa16.74■□□□□ 0.27
NCBP2-205ENST00000428425 HLFQ16534 295 aa16.74■□□□□ 0.27
NCBP2-205ENST00000428425 TTC14Q96N46 770 aa16.74■□□□□ 0.27
NCBP2-205ENST00000428425 CCDC85AQ96PX6 553 aaPredicted RBP16.74■□□□□ 0.27
NCBP2-205ENST00000428425 PUS3Q9BZE2 481 aaKnown RBP16.74■□□□□ 0.27
NCBP2-205ENST00000428425 CWC22Q9HCG8 908 aaKnown RBP16.74■□□□□ 0.27
NCBP2-205ENST00000428425 BRPF3Q9ULD4 1205 aa16.74■□□□□ 0.27
NCBP2-205ENST00000428425 CCDC171Q6TFL3 1326 aa16.74■□□□□ 0.27
NCBP2-205ENST00000428425 ATP5JP18859 108 aa16.73■□□□□ 0.27
NCBP2-205ENST00000428425 PRIM1P49642 420 aaKnown RBP16.73■□□□□ 0.27
NCBP2-205ENST00000428425 FOXD4L5Q5VV16 416 aaPredicted RBP16.73■□□□□ 0.27
NCBP2-205ENST00000428425 CLEC17AQ6ZS10 378 aa16.73■□□□□ 0.27
NCBP2-205ENST00000428425 ZNF589Q86UQ0 364 aaPredicted RBP16.73■□□□□ 0.27
NCBP2-205ENST00000428425 FOXD4L4Q8WXT5 416 aaPredicted RBP16.73■□□□□ 0.27
NCBP2-205ENST00000428425 FAM89AQ96GI7 184 aa16.73■□□□□ 0.27
NCBP2-205ENST00000428425 DOT1LQ8TEK3 1739 aa16.73■□□□□ 0.27
NCBP2-205ENST00000428425 LRP6O75581 1613 aa16.73■□□□□ 0.27
NCBP2-205ENST00000428425 MCM2P49736 904 aa16.73■□□□□ 0.27
NCBP2-205ENST00000428425 NUCB2P80303 420 aa16.73■□□□□ 0.27
NCBP2-205ENST00000428425 ZBTB1Q9Y2K1 713 aa16.73■□□□□ 0.27
NCBP2-205ENST00000428425 STARD3NLO95772 234 aa16.72■□□□□ 0.27
NCBP2-205ENST00000428425 CYP19A1P11511 503 aaPredicted RBP16.72■□□□□ 0.27
NCBP2-205ENST00000428425 TIMM10P62072 90 aa16.72■□□□□ 0.27
NCBP2-205ENST00000428425 MEX3CQ5U5Q3 659 aaKnown RBP16.72■□□□□ 0.27
NCBP2-205ENST00000428425 DNAJC2Q99543 621 aaKnown RBP16.72■□□□□ 0.27
NCBP2-205ENST00000428425 TAF6LQ9Y6J9 622 aa16.72■□□□□ 0.27
NCBP2-205ENST00000428425 SOCS7O14512 581 aa16.72■□□□□ 0.27
NCBP2-205ENST00000428425 GPTP24298 496 aa16.72■□□□□ 0.27
NCBP2-205ENST00000428425 AK2P54819 239 aa16.72■□□□□ 0.27
NCBP2-205ENST00000428425 NECTIN1Q15223 517 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms