RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 PPP1R13BQ96KQ4 1090 aa18.88■□□□□ 0.61
C9orf3-206ENST00000428313 PHLPP2Q6ZVD8 1323 aa18.88■□□□□ 0.61
C9orf3-206ENST00000428313 KIDINS220Q9ULH0 1771 aa18.88■□□□□ 0.61
C9orf3-206ENST00000428313 GOLGA6L4A6NEF3 574 aa18.88■□□□□ 0.61
C9orf3-206ENST00000428313 IMPACTQ9P2X3 320 aa18.88■□□□□ 0.61
C9orf3-206ENST00000428313 KIF20BQ96Q89 1820 aa18.87■□□□□ 0.61
C9orf3-206ENST00000428313 VPS37CA5D8V6 355 aaPredicted RBP18.87■□□□□ 0.61
C9orf3-206ENST00000428313 EFCAB8A8MWE9 144 aa18.87■□□□□ 0.61
C9orf3-206ENST00000428313 MLECQ14165 292 aa18.87■□□□□ 0.61
C9orf3-206ENST00000428313 LRRCC1Q9C099 1032 aa18.87■□□□□ 0.61
C9orf3-206ENST00000428313 CHD2O14647 1828 aaKnown RBP18.87■□□□□ 0.61
C9orf3-206ENST00000428313 TADA3O75528 432 aa18.86■□□□□ 0.61
C9orf3-206ENST00000428313 RPS6KA5O75582 802 aa18.86■□□□□ 0.61
C9orf3-206ENST00000428313 E4F1Q66K89 784 aaPredicted RBP18.86■□□□□ 0.61
C9orf3-206ENST00000428313 PREX1Q8TCU6 1659 aa18.86■□□□□ 0.61
C9orf3-206ENST00000428313 HECW2Q9P2P5 1572 aa18.86■□□□□ 0.61
C9orf3-206ENST00000428313 RIMS2Q9UQ26 1411 aa18.86■□□□□ 0.61
C9orf3-206ENST00000428313 FYB1O15117 783 aa18.86■□□□□ 0.61
C9orf3-206ENST00000428313 KRT24Q2M2I5 525 aa18.86■□□□□ 0.61
C9orf3-206ENST00000428313 TSGA10IPQ3SY00 556 aa18.86■□□□□ 0.61
C9orf3-206ENST00000428313 SUGP1Q8IWZ8 645 aaKnown RBP18.86■□□□□ 0.61
C9orf3-206ENST00000428313 HYPKQ9NX55 129 aa18.86■□□□□ 0.61
C9orf3-206ENST00000428313 CHMP3Q9Y3E7 222 aa18.86■□□□□ 0.61
C9orf3-206ENST00000428313 TSHZ3Q63HK5 1081 aa18.85■□□□□ 0.61
C9orf3-206ENST00000428313 CC2D1AQ6P1N0 951 aaPredicted RBP18.85■□□□□ 0.61
C9orf3-206ENST00000428313 PACS2Q86VP3 889 aa18.85■□□□□ 0.61
C9orf3-206ENST00000428313 CCDC83Q8IWF9 413 aa18.85■□□□□ 0.61
C9orf3-206ENST00000428313 PHACTR3Q96KR7 559 aa18.85■□□□□ 0.61
C9orf3-206ENST00000428313 DEF6Q9H4E7 631 aa18.85■□□□□ 0.61
C9orf3-206ENST00000428313 USP16Q9Y5T5 823 aa18.85■□□□□ 0.61
C9orf3-206ENST00000428313 CD163L1Q9NR16 1453 aa18.85■□□□□ 0.61
C9orf3-206ENST00000428313 CCP110O43303 1012 aa18.85■□□□□ 0.61
C9orf3-206ENST00000428313 SASH3O75995 380 aa18.85■□□□□ 0.61
C9orf3-206ENST00000428313 LEKR1Q6ZMV7 388 aa18.85■□□□□ 0.61
C9orf3-206ENST00000428313 CCDC150Q8NCX0 1101 aa18.85■□□□□ 0.61
C9orf3-206ENST00000428313 ADAM21Q9UKJ8 722 aa18.85■□□□□ 0.61
C9orf3-206ENST00000428313 LARGE1O95461 756 aa18.84■□□□□ 0.61
C9orf3-206ENST00000428313 STX1AQ16623 288 aa18.84■□□□□ 0.61
C9orf3-206ENST00000428313 SWT1Q5T5J6 900 aaKnown RBP18.84■□□□□ 0.61
C9orf3-206ENST00000428313 VPS53Q5VIR6 699 aa18.84■□□□□ 0.61
C9orf3-206ENST00000428313 MNS1Q8NEH6 495 aa18.84■□□□□ 0.61
C9orf3-206ENST00000428313 ZCCHC17Q9NP64 241 aaKnown RBP18.84■□□□□ 0.61
C9orf3-206ENST00000428313 PDCP20941 246 aa18.84■□□□□ 0.61
C9orf3-206ENST00000428313 PPM1EQ8WY54 764 aa18.84■□□□□ 0.61
C9orf3-206ENST00000428313 SETD1AO15047 1707 aaKnown RBP18.84■□□□□ 0.61
C9orf3-206ENST00000428313 TTC41PQ6P2S7 1318 aa18.83■□□□□ 0.61
C9orf3-206ENST00000428313 SGSM2O43147 1006 aa18.83■□□□□ 0.61
C9orf3-206ENST00000428313 SEC31AO94979 1220 aaKnown RBP18.83■□□□□ 0.61
C9orf3-206ENST00000428313 LMAN1P49257 510 aa18.83■□□□□ 0.61
C9orf3-206ENST00000428313 SPATA32Q96LK8 384 aa18.83■□□□□ 0.61
C9orf3-206ENST00000428313 IL25Q9H293 177 aa18.83■□□□□ 0.61
C9orf3-206ENST00000428313 CEP83Q9Y592 693 aa18.83■□□□□ 0.61
C9orf3-206ENST00000428313 CCDC172P0C7W6 258 aa18.83■□□□□ 0.6
C9orf3-206ENST00000428313 ETF1P62495 437 aaKnown RBP18.83■□□□□ 0.6
C9orf3-206ENST00000428313 LSG1Q9H089 658 aaKnown RBP18.83■□□□□ 0.6
C9orf3-206ENST00000428313 DNAI1Q9UI46 699 aa18.83■□□□□ 0.6
C9orf3-206ENST00000428313 CAMSAP1Q5T5Y3 1602 aa18.82■□□□□ 0.6
C9orf3-206ENST00000428313 CTAGE5O15320 804 aa18.82■□□□□ 0.6
C9orf3-206ENST00000428313 LRRFIP1Q32MZ4 808 aaKnown RBP18.82■□□□□ 0.6
C9orf3-206ENST00000428313 CCDC91Q7Z6B0 441 aa18.82■□□□□ 0.6
C9orf3-206ENST00000428313 LEO1Q8WVC0 666 aaPredicted RBP18.82■□□□□ 0.6
C9orf3-206ENST00000428313 PPP6R1Q9UPN7 881 aa18.82■□□□□ 0.6
C9orf3-206ENST00000428313 NRDCO43847 1150 aa18.81■□□□□ 0.6
C9orf3-206ENST00000428313 NR1I2O75469 434 aa18.81■□□□□ 0.6
C9orf3-206ENST00000428313 LARP1BQ659C4 914 aaKnown RBP18.81■□□□□ 0.6
C9orf3-206ENST00000428313 GPR161Q8N6U8 529 aaKnown RBP18.81■□□□□ 0.6
C9orf3-206ENST00000428313 DRC1Q96MC2 740 aa18.81■□□□□ 0.6
C9orf3-206ENST00000428313 CABP2Q9NPB3 220 aa18.81■□□□□ 0.6
C9orf3-206ENST00000428313 PIK3C2BO00750 1634 aa18.81■□□□□ 0.6
C9orf3-206ENST00000428313 CPP00450 1065 aa18.81■□□□□ 0.6
C9orf3-206ENST00000428313 UNC5CLQ8IV45 518 aa18.81■□□□□ 0.6
C9orf3-206ENST00000428313 RASEFQ8IZ41 740 aa18.81■□□□□ 0.6
C9orf3-206ENST00000428313 TM6SF1Q9BZW5 370 aa18.81■□□□□ 0.6
C9orf3-206ENST00000428313 MYCNP04198 464 aaPredicted RBP18.8■□□□□ 0.6
C9orf3-206ENST00000428313 GSCP56915 257 aaPredicted RBP18.8■□□□□ 0.6
C9orf3-206ENST00000428313 C11orf57Q6ZUT1 292 aaPredicted RBP18.8■□□□□ 0.6
C9orf3-206ENST00000428313 ARFGAP3Q9NP61 516 aa18.8■□□□□ 0.6
C9orf3-206ENST00000428313 TERF2IPQ9NYB0 399 aa18.8■□□□□ 0.6
C9orf3-206ENST00000428313 BECN2A8MW95 431 aa18.8■□□□□ 0.6
C9orf3-206ENST00000428313 GIGYF1O75420 1035 aaPredicted RBP18.8■□□□□ 0.6
C9orf3-206ENST00000428313 MKRN1Q9UHC7 482 aaKnown RBP18.8■□□□□ 0.6
C9orf3-206ENST00000428313 ST3GAL1Q11201 340 aa18.79■□□□□ 0.6
C9orf3-206ENST00000428313 CT47A1Q5JQC4 288 aaPredicted RBP18.79■□□□□ 0.6
C9orf3-206ENST00000428313 CDC37L1Q7L3B6 337 aa18.79■□□□□ 0.6
C9orf3-206ENST00000428313 TOMM22Q9NS69 142 aa18.79■□□□□ 0.6
C9orf3-206ENST00000428313 PDRG1Q9NUG6 133 aa18.79■□□□□ 0.6
C9orf3-206ENST00000428313 ABCC3O15438 1527 aa18.79■□□□□ 0.6
C9orf3-206ENST00000428313 NPATQ14207 1427 aa18.79■□□□□ 0.6
C9orf3-206ENST00000428313 EIF3CLB5ME19 914 aaKnown RBP18.79■□□□□ 0.6
C9orf3-206ENST00000428313 GNAI3P08754 354 aa18.79■□□□□ 0.6
C9orf3-206ENST00000428313 CORO7P57737 925 aa18.79■□□□□ 0.6
C9orf3-206ENST00000428313 BICD2Q8TD16 824 aa18.79■□□□□ 0.6
C9orf3-206ENST00000428313 EIF3CQ99613 913 aaKnown RBP18.79■□□□□ 0.6
C9orf3-206ENST00000428313 LARP6Q9BRS8 491 aaKnown RBP18.79■□□□□ 0.6
C9orf3-206ENST00000428313 FUT8Q9BYC5 575 aa18.79■□□□□ 0.6
C9orf3-206ENST00000428313 GNAI2P04899 355 aa18.78■□□□□ 0.6
C9orf3-206ENST00000428313 CCT4P50991 539 aaKnown RBP18.78■□□□□ 0.6
C9orf3-206ENST00000428313 EVCP57679 992 aa18.78■□□□□ 0.6
C9orf3-206ENST00000428313 JAKMIP3Q5VZ66 844 aa18.78■□□□□ 0.6
C9orf3-206ENST00000428313 MCTP2Q6DN12 878 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms