RNA–Protein interactions for RNA: ENST00000427746.1

HLCS-204, Transcript of holocarboxylase synthetase, humanhuman

TSL 3

Gene HLCS, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-204ENST00000427746 HSP90AB3PQ58FF7 597 aa25.12■■□□□ 1.61
HLCS-204ENST00000427746 HOXA10P31260 410 aaPredicted RBP25.11■■□□□ 1.61
HLCS-204ENST00000427746 TCIRG1Q13488 830 aa25.11■■□□□ 1.61
HLCS-204ENST00000427746 CCDC93Q567U6 631 aa25.1■■□□□ 1.61
HLCS-204ENST00000427746 SLC10A5Q5PT55 438 aa25.1■■□□□ 1.61
HLCS-204ENST00000427746 NLRP10Q86W26 655 aa25.1■■□□□ 1.61
HLCS-204ENST00000427746 UTP14AQ9BVJ6 771 aaKnown RBP25.1■■□□□ 1.61
HLCS-204ENST00000427746 HYPKQ9NX55 129 aa25.1■■□□□ 1.61
HLCS-204ENST00000427746 RNF123Q5XPI4 1314 aa25.1■■□□□ 1.61
HLCS-204ENST00000427746 GLTPD2A6NH11 291 aa25.09■■□□□ 1.61
HLCS-204ENST00000427746 TOMM70O94826 608 aa25.09■■□□□ 1.61
HLCS-204ENST00000427746 NCBP3Q53F19 620 aaKnown RBP25.09■■□□□ 1.61
HLCS-204ENST00000427746 C3orf67Q6ZVT6 689 aa25.09■■□□□ 1.61
HLCS-204ENST00000427746 WWC1Q8IX03 1113 aa25.09■■□□□ 1.61
HLCS-204ENST00000427746 C8orf58Q8NAV2 365 aa25.09■■□□□ 1.61
HLCS-204ENST00000427746 PLBD2Q8NHP8 589 aa25.09■■□□□ 1.61
HLCS-204ENST00000427746 DICER1Q9UPY3 1922 aaKnown RBP25.08■■□□□ 1.61
HLCS-204ENST00000427746 OLFM4Q6UX06 510 aa25.08■■□□□ 1.61
HLCS-204ENST00000427746 ANKRD13DQ6ZTN6 518 aa25.08■■□□□ 1.61
HLCS-204ENST00000427746 CEP350Q5VT06 3117 aa25.08■■□□□ 1.61
HLCS-204ENST00000427746 SNED1Q8TER0 1413 aa25.07■■□□□ 1.6
HLCS-204ENST00000427746 ELL2O00472 640 aaPredicted RBP25.07■■□□□ 1.6
HLCS-204ENST00000427746 RPGRQ92834 1020 aaKnown RBP25.07■■□□□ 1.6
HLCS-204ENST00000427746 RRAGCQ9HB90 399 aa25.06■■□□□ 1.6
HLCS-204ENST00000427746 FKBP4Q02790 459 aaKnown RBP eCLIP25.05■■□□□ 1.6
HLCS-204ENST00000427746 RTKN2Q8IZC4 609 aa25.05■■□□□ 1.6
HLCS-204ENST00000427746 NLRP3Q96P20 1036 aa25.05■■□□□ 1.6
HLCS-204ENST00000427746 CRAMP1Q96RY5 1269 aa25.05■■□□□ 1.6
HLCS-204ENST00000427746 HSPA6P17066 643 aa25.04■■□□□ 1.6
HLCS-204ENST00000427746 ISCA1Q9BUE6 129 aa25.04■■□□□ 1.6
HLCS-204ENST00000427746 SYNE4Q8N205 404 aa25.03■■□□□ 1.6
HLCS-204ENST00000427746 TSPYL6Q8N831 410 aa25.03■■□□□ 1.6
HLCS-204ENST00000427746 RBM46Q8TBY0 533 aaKnown RBP25.03■■□□□ 1.6
HLCS-204ENST00000427746 TSR2Q969E8 191 aaKnown RBP25.03■■□□□ 1.6
HLCS-204ENST00000427746 RBM17Q96I25 401 aaKnown RBP25.03■■□□□ 1.6
HLCS-204ENST00000427746 IL16Q14005 1332 aa25.03■■□□□ 1.6
HLCS-204ENST00000427746 PHAXQ9H814 394 aaKnown RBP25.02■■□□□ 1.6
HLCS-204ENST00000427746 TRMT112Q9UI30 125 aaKnown RBP25.02■■□□□ 1.6
HLCS-204ENST00000427746 CC2D2BQ6DHV5 1058 aa25.01■■□□□ 1.59
HLCS-204ENST00000427746 DPY19L2Q6NUT2 758 aa25.01■■□□□ 1.59
HLCS-204ENST00000427746 SH3TC1Q8TE82 1336 aa25.01■■□□□ 1.59
HLCS-204ENST00000427746 HCLS1P14317 486 aaPredicted RBP25■■□□□ 1.59
HLCS-204ENST00000427746 TRIM28Q13263 835 aaKnown RBP25■■□□□ 1.59
HLCS-204ENST00000427746 C16orf71Q8IYS4 520 aaPredicted RBP25■■□□□ 1.59
HLCS-204ENST00000427746 PSMD1Q99460 953 aa25■■□□□ 1.59
HLCS-204ENST00000427746 CHMP4AQ9BY43 222 aa25■■□□□ 1.59
HLCS-204ENST00000427746 ZNF277Q9NRM2 450 aaPredicted RBP25■■□□□ 1.59
HLCS-204ENST00000427746 WDR90Q96KV7 1748 aa25■■□□□ 1.59
HLCS-204ENST00000427746 LAMB2P55268 1798 aa25■■□□□ 1.59
HLCS-204ENST00000427746 POTECB2RU33 542 aa24.99■■□□□ 1.59
HLCS-204ENST00000427746 ATP5J2-PTCD1G3V325 749 aa24.99■■□□□ 1.59
HLCS-204ENST00000427746 VEGFAP15692 232 aaPredicted RBP24.99■■□□□ 1.59
HLCS-204ENST00000427746 CCDC30Q5VVM6 783 aa24.99■■□□□ 1.59
HLCS-204ENST00000427746 PPEF1O14829 653 aaPredicted RBP24.98■■□□□ 1.59
HLCS-204ENST00000427746 GOLGA2Q08379 1002 aa24.98■■□□□ 1.59
HLCS-204ENST00000427746 SLC51AQ86UW1 340 aa24.98■■□□□ 1.59
HLCS-204ENST00000427746 ABCC4O15439 1325 aa24.97■■□□□ 1.59
HLCS-204ENST00000427746 GRIPAP1Q4V328 841 aa24.97■■□□□ 1.59
HLCS-204ENST00000427746 ZNF428Q96B54 188 aa24.97■■□□□ 1.59
HLCS-204ENST00000427746 IARSP41252 1262 aaKnown RBP24.96■■□□□ 1.59
HLCS-204ENST00000427746 RIC3Q7Z5B4 369 aa24.96■■□□□ 1.59
HLCS-204ENST00000427746 DDX60Q8IY21 1712 aaKnown RBP24.95■■□□□ 1.59
HLCS-204ENST00000427746 DDNO94850 711 aaPredicted RBP24.95■■□□□ 1.58
HLCS-204ENST00000427746 FSTL1Q12841 308 aa24.95■■□□□ 1.58
HLCS-204ENST00000427746 WDR63Q8IWG1 891 aa24.95■■□□□ 1.58
HLCS-204ENST00000427746 FAM89AQ96GI7 184 aa24.95■■□□□ 1.58
HLCS-204ENST00000427746 ATP6V0A2Q9Y487 856 aa24.95■■□□□ 1.58
HLCS-204ENST00000427746 TWISTNBQ3B726 338 aaPredicted RBP24.94■■□□□ 1.58
HLCS-204ENST00000427746 FANCIQ9NVI1 1328 aa24.93■■□□□ 1.58
HLCS-204ENST00000427746 TCERG1O14776 1098 aaKnown RBP24.93■■□□□ 1.58
HLCS-204ENST00000427746 FAM9BQ8IZU0 186 aa24.93■■□□□ 1.58
HLCS-204ENST00000427746 SALL2Q9Y467 1007 aaPredicted RBP24.93■■□□□ 1.58
HLCS-204ENST00000427746 BBOX1O75936 387 aa24.92■■□□□ 1.58
HLCS-204ENST00000427746 COL4A5P29400 1685 aa24.91■■□□□ 1.58
HLCS-204ENST00000427746 ZNF541Q9H0D2 1346 aa24.91■■□□□ 1.58
HLCS-204ENST00000427746 FZD9O00144 591 aa24.91■■□□□ 1.58
HLCS-204ENST00000427746 DDX58O95786 925 aaKnown RBP24.91■■□□□ 1.58
HLCS-204ENST00000427746 SF3B3Q15393 1217 aaKnown RBP24.91■■□□□ 1.58
HLCS-204ENST00000427746 DDX46Q7L014 1031 aaKnown RBP24.91■■□□□ 1.58
HLCS-204ENST00000427746 SMC1BQ8NDV3 1235 aa24.91■■□□□ 1.58
HLCS-204ENST00000427746 MYD88Q99836 296 aa24.91■■□□□ 1.58
HLCS-204ENST00000427746 APLP1P51693 650 aa24.9■■□□□ 1.58
HLCS-204ENST00000427746 GRAPQ13588 217 aa24.9■■□□□ 1.58
HLCS-204ENST00000427746 GRAPLQ8TC17 118 aaPredicted RBP24.9■■□□□ 1.58
HLCS-204ENST00000427746 L3MBTL3Q96JM7 780 aaPredicted RBP24.9■■□□□ 1.58
HLCS-204ENST00000427746 METTL22Q9BUU2 404 aaPredicted RBP24.9■■□□□ 1.58
HLCS-204ENST00000427746 STK31Q9BXU1 1019 aa24.9■■□□□ 1.58
HLCS-204ENST00000427746 SP8Q8IXZ3 490 aa24.89■■□□□ 1.58
HLCS-204ENST00000427746 ZBTB38Q8NAP3 1195 aaPredicted RBP24.89■■□□□ 1.58
HLCS-204ENST00000427746 CCDC191Q8NCU4 936 aa24.89■■□□□ 1.58
HLCS-204ENST00000427746 IRS4O14654 1257 aaPredicted RBP24.88■■□□□ 1.57
HLCS-204ENST00000427746 RTL5Q5HYW3 569 aaPredicted RBP24.88■■□□□ 1.57
HLCS-204ENST00000427746 SPINK5Q9NQ38 1064 aaPredicted RBP24.88■■□□□ 1.57
HLCS-204ENST00000427746 MAP3K2Q9Y2U5 619 aa24.88■■□□□ 1.57
HLCS-204ENST00000427746 KSR2Q6VAB6 950 aa24.87■■□□□ 1.57
HLCS-204ENST00000427746 JDP2Q8WYK2 163 aa24.87■■□□□ 1.57
HLCS-204ENST00000427746 RTFDC1Q9BY42 306 aaPredicted RBP24.87■■□□□ 1.57
HLCS-204ENST00000427746 TMX4Q9H1E5 349 aaPredicted RBP24.87■■□□□ 1.57
HLCS-204ENST00000427746 TAF1P21675 1872 aa24.86■■□□□ 1.57
HLCS-204ENST00000427746 PI4KAP2A4QPH2 592 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms