RNA–Protein interactions for RNA: ENST00000427419.5

SLC40A1-204, Transcript of solute carrier family 40 member 1, humanhuman

TSL 1 (best)

Gene SLC40A1, Length 299 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-204ENST00000427419 NTSR2O95665 410 aa13.02□□□□□ -0.33
SLC40A1-204ENST00000427419 AIMP1Q12904 312 aaKnown RBP13.02□□□□□ -0.33
SLC40A1-204ENST00000427419 TCIRG1Q13488 830 aa13.02□□□□□ -0.33
SLC40A1-204ENST00000427419 ERFEQ4G0M1 354 aa13.02□□□□□ -0.33
SLC40A1-204ENST00000427419 SUSD4Q5VX71 490 aa13.02□□□□□ -0.33
SLC40A1-204ENST00000427419 DPY19L2Q6NUT2 758 aa13.02□□□□□ -0.33
SLC40A1-204ENST00000427419 NUTM1Q86Y26 1132 aa13.02□□□□□ -0.33
SLC40A1-204ENST00000427419 PLBD2Q8NHP8 589 aa13.02□□□□□ -0.33
SLC40A1-204ENST00000427419 NECTIN2Q92692 538 aa13.02□□□□□ -0.33
SLC40A1-204ENST00000427419 RBM17Q96I25 401 aaKnown RBP13.02□□□□□ -0.33
SLC40A1-204ENST00000427419 NLRP3Q96P20 1036 aa13.02□□□□□ -0.33
SLC40A1-204ENST00000427419 IL16Q14005 1332 aa13.02□□□□□ -0.33
SLC40A1-204ENST00000427419 GLTPD2A6NH11 291 aa13.01□□□□□ -0.33
SLC40A1-204ENST00000427419 HOXA10P31260 410 aaPredicted RBP13.01□□□□□ -0.33
SLC40A1-204ENST00000427419 KRT24Q2M2I5 525 aa13.01□□□□□ -0.33
SLC40A1-204ENST00000427419 SLC10A5Q5PT55 438 aa13.01□□□□□ -0.33
SLC40A1-204ENST00000427419 ANKRD13DQ6ZTN6 518 aa13.01□□□□□ -0.33
SLC40A1-204ENST00000427419 C7orf43Q8WVR3 580 aa13.01□□□□□ -0.33
SLC40A1-204ENST00000427419 TMX4Q9H1E5 349 aaPredicted RBP13.01□□□□□ -0.33
SLC40A1-204ENST00000427419 ABCC12Q96J65 1359 aa13.01□□□□□ -0.33
SLC40A1-204ENST00000427419 ANXA1P04083 346 aa13□□□□□ -0.33
SLC40A1-204ENST00000427419 FKBP4Q02790 459 aaKnown RBP eCLIP13□□□□□ -0.33
SLC40A1-204ENST00000427419 GOLGA2Q08379 1002 aa13□□□□□ -0.33
SLC40A1-204ENST00000427419 CCDC30Q5VVM6 783 aa13□□□□□ -0.33
SLC40A1-204ENST00000427419 RBM46Q8TBY0 533 aaKnown RBP13□□□□□ -0.33
SLC40A1-204ENST00000427419 CRAMP1Q96RY5 1269 aa13□□□□□ -0.33
SLC40A1-204ENST00000427419 ZNF219Q9P2Y4 722 aaPredicted RBP13□□□□□ -0.33
SLC40A1-204ENST00000427419 SH3TC1Q8TE82 1336 aa12.99□□□□□ -0.33
SLC40A1-204ENST00000427419 HSP90B1P14625 803 aaKnown RBP12.99□□□□□ -0.33
SLC40A1-204ENST00000427419 CCDC184Q52MB2 194 aa12.99□□□□□ -0.33
SLC40A1-204ENST00000427419 NLRP10Q86W26 655 aa12.99□□□□□ -0.33
SLC40A1-204ENST00000427419 WWC1Q8IX03 1113 aa12.99□□□□□ -0.33
SLC40A1-204ENST00000427419 NMRK2Q9NPI5 230 aa12.99□□□□□ -0.33
SLC40A1-204ENST00000427419 DDX58O95786 925 aaKnown RBP12.98□□□□□ -0.33
SLC40A1-204ENST00000427419 VEGFAP15692 232 aaPredicted RBP12.98□□□□□ -0.33
SLC40A1-204ENST00000427419 HSPA6P17066 643 aa12.98□□□□□ -0.33
SLC40A1-204ENST00000427419 FSTL1Q12841 308 aa12.98□□□□□ -0.33
SLC40A1-204ENST00000427419 PSMD1Q99460 953 aa12.98□□□□□ -0.33
SLC40A1-204ENST00000427419 TRMT112Q9UI30 125 aaKnown RBP12.98□□□□□ -0.33
SLC40A1-204ENST00000427419 PRELPP51888 382 aa12.97□□□□□ -0.33
SLC40A1-204ENST00000427419 TRIM28Q13263 835 aaKnown RBP12.97□□□□□ -0.33
SLC40A1-204ENST00000427419 TMC4Q7Z404 712 aa12.97□□□□□ -0.33
SLC40A1-204ENST00000427419 WDR63Q8IWG1 891 aa12.97□□□□□ -0.33
SLC40A1-204ENST00000427419 STK31Q9BXU1 1019 aa12.97□□□□□ -0.33
SLC40A1-204ENST00000427419 WDR90Q96KV7 1748 aa12.96□□□□□ -0.33
SLC40A1-204ENST00000427419 PPEF1O14829 653 aaPredicted RBP12.96□□□□□ -0.33
SLC40A1-204ENST00000427419 RIC3Q7Z5B4 369 aa12.96□□□□□ -0.33
SLC40A1-204ENST00000427419 ISCA1Q9BUE6 129 aa12.96□□□□□ -0.33
SLC40A1-204ENST00000427419 RRAGCQ9HB90 399 aa12.96□□□□□ -0.33
SLC40A1-204ENST00000427419 CACNA1FO60840 1977 aa12.96□□□□□ -0.34
SLC40A1-204ENST00000427419 ELL2O00472 640 aaPredicted RBP12.95□□□□□ -0.34
SLC40A1-204ENST00000427419 BBOX1O75936 387 aa12.95□□□□□ -0.34
SLC40A1-204ENST00000427419 DDX46Q7L014 1031 aaKnown RBP12.95□□□□□ -0.34
SLC40A1-204ENST00000427419 C8orf58Q8NAV2 365 aa12.95□□□□□ -0.34
SLC40A1-204ENST00000427419 SMC1BQ8NDV3 1235 aa12.95□□□□□ -0.34
SLC40A1-204ENST00000427419 VPS33BQ9H267 617 aa12.95□□□□□ -0.34
SLC40A1-204ENST00000427419 IQCA1LA6NCM1 817 aa12.94□□□□□ -0.34
SLC40A1-204ENST00000427419 IARSP41252 1262 aaKnown RBP12.94□□□□□ -0.34
SLC40A1-204ENST00000427419 APLP1P51693 650 aa12.94□□□□□ -0.34
SLC40A1-204ENST00000427419 TWISTNBQ3B726 338 aaPredicted RBP12.94□□□□□ -0.34
SLC40A1-204ENST00000427419 SYNE4Q8N205 404 aa12.94□□□□□ -0.34
SLC40A1-204ENST00000427419 SUPT20HQ8NEM7 779 aa12.94□□□□□ -0.34
SLC40A1-204ENST00000427419 JDP2Q8WYK2 163 aa12.94□□□□□ -0.34
SLC40A1-204ENST00000427419 ATP6V0A2Q9Y487 856 aa12.94□□□□□ -0.34
SLC40A1-204ENST00000427419 CCDC191Q8NCU4 936 aa12.93□□□□□ -0.34
SLC40A1-204ENST00000427419 ZNF277Q9NRM2 450 aaPredicted RBP12.93□□□□□ -0.34
SLC40A1-204ENST00000427419 LAMB2P55268 1798 aa12.93□□□□□ -0.34
SLC40A1-204ENST00000427419 SNED1Q8TER0 1413 aa12.93□□□□□ -0.34
SLC40A1-204ENST00000427419 SCN4AP35499 1836 aa12.92□□□□□ -0.34
SLC40A1-204ENST00000427419 ABCC4O15439 1325 aa12.92□□□□□ -0.34
SLC40A1-204ENST00000427419 NEXNQ0ZGT2 675 aa12.92□□□□□ -0.34
SLC40A1-204ENST00000427419 GRAPQ13588 217 aa12.92□□□□□ -0.34
SLC40A1-204ENST00000427419 SP8Q8IXZ3 490 aa12.92□□□□□ -0.34
SLC40A1-204ENST00000427419 ZBTB38Q8NAP3 1195 aaPredicted RBP12.92□□□□□ -0.34
SLC40A1-204ENST00000427419 GRAPLQ8TC17 118 aaPredicted RBP12.92□□□□□ -0.34
SLC40A1-204ENST00000427419 TSR2Q969E8 191 aaKnown RBP12.92□□□□□ -0.34
SLC40A1-204ENST00000427419 METTL22Q9BUU2 404 aaPredicted RBP12.92□□□□□ -0.34
SLC40A1-204ENST00000427419 MYH16Q9H6N6 1097 aa12.92□□□□□ -0.34
SLC40A1-204ENST00000427419 PHAXQ9H814 394 aaKnown RBP12.92□□□□□ -0.34
SLC40A1-204ENST00000427419 DDX60Q8IY21 1712 aaKnown RBP12.91□□□□□ -0.34
SLC40A1-204ENST00000427419 ATP5J2-PTCD1G3V325 749 aa12.91□□□□□ -0.34
SLC40A1-204ENST00000427419 HCLS1P14317 486 aaPredicted RBP12.91□□□□□ -0.34
SLC40A1-204ENST00000427419 EIF6P56537 245 aaKnown RBP12.91□□□□□ -0.34
SLC40A1-204ENST00000427419 SF3B3Q15393 1217 aaKnown RBP12.91□□□□□ -0.34
SLC40A1-204ENST00000427419 KSR2Q6VAB6 950 aa12.91□□□□□ -0.34
SLC40A1-204ENST00000427419 C3orf67Q6ZVT6 689 aa12.91□□□□□ -0.34
SLC40A1-204ENST00000427419 FAM9BQ8IZU0 186 aa12.91□□□□□ -0.34
SLC40A1-204ENST00000427419 TSPYL6Q8N831 410 aa12.91□□□□□ -0.34
SLC40A1-204ENST00000427419 L3MBTL3Q96JM7 780 aaPredicted RBP12.91□□□□□ -0.34
SLC40A1-204ENST00000427419 CWC25Q9NXE8 425 aaPredicted RBP12.91□□□□□ -0.34
SLC40A1-204ENST00000427419 FANCIQ9NVI1 1328 aa12.9□□□□□ -0.34
SLC40A1-204ENST00000427419 FZD9O00144 591 aa12.9□□□□□ -0.34
SLC40A1-204ENST00000427419 IRS4O14654 1257 aaPredicted RBP12.9□□□□□ -0.34
SLC40A1-204ENST00000427419 OLFM4Q6UX06 510 aa12.9□□□□□ -0.34
SLC40A1-204ENST00000427419 LARGE2Q8N3Y3 721 aa12.9□□□□□ -0.34
SLC40A1-204ENST00000427419 FAM89AQ96GI7 184 aa12.9□□□□□ -0.34
SLC40A1-204ENST00000427419 MYD88Q99836 296 aa12.9□□□□□ -0.34
SLC40A1-204ENST00000427419 RTFDC1Q9BY42 306 aaPredicted RBP12.9□□□□□ -0.34
SLC40A1-204ENST00000427419 DDNO94850 711 aaPredicted RBP12.89□□□□□ -0.35
SLC40A1-204ENST00000427419 PCCAP05165 728 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms