RNA–Protein interactions for RNA: ENST00000427118.1

AFF3-208, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-208ENST00000427118 C8orf58Q8NAV2 365 aa20.5■□□□□ 0.87
AFF3-208ENST00000427118 SPINK5Q9NQ38 1064 aaPredicted RBP20.5■□□□□ 0.87
AFF3-208ENST00000427118 C21orf2O43822 256 aa20.49■□□□□ 0.87
AFF3-208ENST00000427118 CT47B1P0C2W7 299 aaPredicted RBP20.49■□□□□ 0.87
AFF3-208ENST00000427118 ERFEQ4G0M1 354 aa20.49■□□□□ 0.87
AFF3-208ENST00000427118 PDZRN3Q9UPQ7 1066 aa20.49■□□□□ 0.87
AFF3-208ENST00000427118 FER1L6Q2WGJ9 1857 aa20.49■□□□□ 0.87
AFF3-208ENST00000427118 STYK1Q6J9G0 422 aa20.48■□□□□ 0.87
AFF3-208ENST00000427118 ZNF428Q96B54 188 aa20.48■□□□□ 0.87
AFF3-208ENST00000427118 MASTLQ96GX5 879 aa20.48■□□□□ 0.87
AFF3-208ENST00000427118 RNF181Q9P0P0 153 aa20.48■□□□□ 0.87
AFF3-208ENST00000427118 KLRG2A4D1S0 409 aaPredicted RBP20.47■□□□□ 0.87
AFF3-208ENST00000427118 NFKBIEO00221 500 aa20.47■□□□□ 0.87
AFF3-208ENST00000427118 NTSR2O95665 410 aa20.47■□□□□ 0.87
AFF3-208ENST00000427118 PRPF40BQ6NWY9 871 aaKnown RBP20.47■□□□□ 0.87
AFF3-208ENST00000427118 TSPYL6Q8N831 410 aa20.47■□□□□ 0.87
AFF3-208ENST00000427118 GPBP1L1Q9HC44 474 aaPredicted RBP20.47■□□□□ 0.87
AFF3-208ENST00000427118 GTF2E1P29083 439 aaPredicted RBP20.46■□□□□ 0.87
AFF3-208ENST00000427118 TWISTNBQ3B726 338 aaPredicted RBP20.46■□□□□ 0.87
AFF3-208ENST00000427118 NYXQ9GZU5 481 aa20.46■□□□□ 0.87
AFF3-208ENST00000427118 EXOSC9Q06265 439 aaKnown RBP20.45■□□□□ 0.86
AFF3-208ENST00000427118 C3orf67Q6ZVT6 689 aa20.45■□□□□ 0.86
AFF3-208ENST00000427118 CNKSR1Q969H4 720 aa20.45■□□□□ 0.86
AFF3-208ENST00000427118 DBF4Q9UBU7 674 aaPredicted RBP20.45■□□□□ 0.86
AFF3-208ENST00000427118 IBTKQ9P2D0 1353 aaPredicted RBP20.45■□□□□ 0.86
AFF3-208ENST00000427118 NPR1P16066 1061 aa20.44■□□□□ 0.86
AFF3-208ENST00000427118 CCDC30Q5VVM6 783 aa20.44■□□□□ 0.86
AFF3-208ENST00000427118 OLFM4Q6UX06 510 aa20.44■□□□□ 0.86
AFF3-208ENST00000427118 C1QTNF8P60827 252 aa20.43■□□□□ 0.86
AFF3-208ENST00000427118 SLC51AQ86UW1 340 aa20.43■□□□□ 0.86
AFF3-208ENST00000427118 SYNE4Q8N205 404 aa20.43■□□□□ 0.86
AFF3-208ENST00000427118 TIAM2Q8IVF5 1701 aa20.43■□□□□ 0.86
AFF3-208ENST00000427118 LAMB2P55268 1798 aa20.43■□□□□ 0.86
AFF3-208ENST00000427118 TCIRG1Q13488 830 aa20.42■□□□□ 0.86
AFF3-208ENST00000427118 NLRP10Q86W26 655 aa20.42■□□□□ 0.86
AFF3-208ENST00000427118 C7orf43Q8WVR3 580 aa20.42■□□□□ 0.86
AFF3-208ENST00000427118 PHAXQ9H814 394 aaKnown RBP20.42■□□□□ 0.86
AFF3-208ENST00000427118 HYPKQ9NX55 129 aa20.42■□□□□ 0.86
AFF3-208ENST00000427118 DICER1Q9UPY3 1922 aaKnown RBP20.41■□□□□ 0.86
AFF3-208ENST00000427118 KIF3CO14782 793 aa20.41■□□□□ 0.86
AFF3-208ENST00000427118 VAMP4O75379 141 aa20.41■□□□□ 0.86
AFF3-208ENST00000427118 LMNB1P20700 586 aa20.41■□□□□ 0.86
AFF3-208ENST00000427118 CRY2Q49AN0 593 aa20.41■□□□□ 0.86
AFF3-208ENST00000427118 PARP10Q53GL7 1025 aa20.41■□□□□ 0.86
AFF3-208ENST00000427118 PPP1R42Q7Z4L9 355 aa20.41■□□□□ 0.86
AFF3-208ENST00000427118 CCDC136Q96JN2 1154 aa20.41■□□□□ 0.86
AFF3-208ENST00000427118 UTP14AQ9BVJ6 771 aaKnown RBP20.41■□□□□ 0.86
AFF3-208ENST00000427118 TCERG1O14776 1098 aaKnown RBP20.4■□□□□ 0.86
AFF3-208ENST00000427118 RIC1Q4ADV7 1423 aa20.4■□□□□ 0.86
AFF3-208ENST00000427118 ANKRD13DQ6ZTN6 518 aa20.4■□□□□ 0.86
AFF3-208ENST00000427118 PLBD2Q8NHP8 589 aa20.4■□□□□ 0.86
AFF3-208ENST00000427118 NMRK2Q9NPI5 230 aa20.4■□□□□ 0.86
AFF3-208ENST00000427118 ATP5J2-PTCD1G3V325 749 aa20.39■□□□□ 0.85
AFF3-208ENST00000427118 HSP90AB3PQ58FF7 597 aa20.39■□□□□ 0.85
AFF3-208ENST00000427118 STK31Q9BXU1 1019 aa20.39■□□□□ 0.85
AFF3-208ENST00000427118 HCLS1P14317 486 aaPredicted RBP20.38■□□□□ 0.85
AFF3-208ENST00000427118 TAF1P21675 1872 aa20.37■□□□□ 0.85
AFF3-208ENST00000427118 DDX60Q8IY21 1712 aaKnown RBP20.37■□□□□ 0.85
AFF3-208ENST00000427118 ISCA1Q9BUE6 129 aa20.37■□□□□ 0.85
AFF3-208ENST00000427118 TAOK3Q9H2K8 898 aa20.36■□□□□ 0.85
AFF3-208ENST00000427118 TRMT112Q9UI30 125 aaKnown RBP20.36■□□□□ 0.85
AFF3-208ENST00000427118 LTBP3Q9NS15 1303 aa20.35■□□□□ 0.85
AFF3-208ENST00000427118 HOXA10P31260 410 aaPredicted RBP20.35■□□□□ 0.85
AFF3-208ENST00000427118 PDE3AQ14432 1141 aa20.35■□□□□ 0.85
AFF3-208ENST00000427118 CCDC93Q567U6 631 aa20.35■□□□□ 0.85
AFF3-208ENST00000427118 SLC10A5Q5PT55 438 aa20.35■□□□□ 0.85
AFF3-208ENST00000427118 EXOC6Q8TAG9 804 aa20.35■□□□□ 0.85
AFF3-208ENST00000427118 RPGRQ92834 1020 aaKnown RBP20.35■□□□□ 0.85
AFF3-208ENST00000427118 SNED1Q8TER0 1413 aa20.35■□□□□ 0.85
AFF3-208ENST00000427118 PLIN1O60240 522 aa20.34■□□□□ 0.85
AFF3-208ENST00000427118 MS4A1P11836 297 aa20.34■□□□□ 0.85
AFF3-208ENST00000427118 ALDH1B1P30837 517 aa20.34■□□□□ 0.85
AFF3-208ENST00000427118 RARSP54136 660 aaKnown RBP20.34■□□□□ 0.85
AFF3-208ENST00000427118 B4GALNT3Q6L9W6 998 aa20.34■□□□□ 0.85
AFF3-208ENST00000427118 SLC4A2P04920 1241 aa20.33■□□□□ 0.85
AFF3-208ENST00000427118 SOGA3Q5TF21 947 aa20.33■□□□□ 0.85
AFF3-208ENST00000427118 RIC3Q7Z5B4 369 aa20.33■□□□□ 0.85
AFF3-208ENST00000427118 NLRP3Q96P20 1036 aa20.33■□□□□ 0.85
AFF3-208ENST00000427118 ZNF277Q9NRM2 450 aaPredicted RBP20.33■□□□□ 0.85
AFF3-208ENST00000427118 SH3TC1Q8TE82 1336 aa20.32■□□□□ 0.84
AFF3-208ENST00000427118 AAMPQ13685 434 aa20.32■□□□□ 0.84
AFF3-208ENST00000427118 RTL5Q5HYW3 569 aaPredicted RBP20.32■□□□□ 0.84
AFF3-208ENST00000427118 G2E3Q7L622 706 aa20.32■□□□□ 0.84
AFF3-208ENST00000427118 FAM89AQ96GI7 184 aa20.32■□□□□ 0.84
AFF3-208ENST00000427118 RBM17Q96I25 401 aaKnown RBP20.32■□□□□ 0.84
AFF3-208ENST00000427118 MYD88Q99836 296 aa20.32■□□□□ 0.84
AFF3-208ENST00000427118 COL4A1P02462 1669 aa20.32■□□□□ 0.84
AFF3-208ENST00000427118 ABCC4O15439 1325 aa20.31■□□□□ 0.84
AFF3-208ENST00000427118 DDX58O95786 925 aaKnown RBP20.31■□□□□ 0.84
AFF3-208ENST00000427118 FKBP4Q02790 459 aaKnown RBP eCLIP20.31■□□□□ 0.84
AFF3-208ENST00000427118 CRAMP1Q96RY5 1269 aa20.31■□□□□ 0.84
AFF3-208ENST00000427118 CRBNQ96SW2 442 aa20.31■□□□□ 0.84
AFF3-208ENST00000427118 RRAGCQ9HB90 399 aa20.31■□□□□ 0.84
AFF3-208ENST00000427118 ZC3H4Q9UPT8 1303 aaKnown RBP20.3■□□□□ 0.84
AFF3-208ENST00000427118 BCAR3O75815 825 aa20.3■□□□□ 0.84
AFF3-208ENST00000427118 JARID2Q92833 1246 aaPredicted RBP20.3■□□□□ 0.84
AFF3-208ENST00000427118 KDM2BQ8NHM5 1336 aa20.29■□□□□ 0.84
AFF3-208ENST00000427118 CACNA1FO60840 1977 aa20.29■□□□□ 0.84
AFF3-208ENST00000427118 GLTPD2A6NH11 291 aa20.29■□□□□ 0.84
AFF3-208ENST00000427118 PPEF1O14829 653 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms