RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 ADGRB1O14514 1584 aa8.78□□□□□ -1
NIF3L1-207ENST00000426253 GPRASP1Q5JY77 1395 aa8.78□□□□□ -1
NIF3L1-207ENST00000426253 KNDC1Q76NI1 1749 aa8.78□□□□□ -1
NIF3L1-207ENST00000426253 PER1O15534 1290 aaPredicted RBP8.78□□□□□ -1
NIF3L1-207ENST00000426253 GPR37L1O60883 481 aa8.78□□□□□ -1
NIF3L1-207ENST00000426253 FSTL1Q12841 308 aa8.78□□□□□ -1
NIF3L1-207ENST00000426253 RNF19BQ6ZMZ0 732 aa8.78□□□□□ -1
NIF3L1-207ENST00000426253 CALR3Q96L12 384 aaKnown RBP8.78□□□□□ -1
NIF3L1-207ENST00000426253 CDK19Q9BWU1 502 aa8.78□□□□□ -1
NIF3L1-207ENST00000426253 PAPPAQ13219 1627 aa8.77□□□□□ -1.01
NIF3L1-207ENST00000426253 AKAP12Q02952 1782 aa8.77□□□□□ -1.01
NIF3L1-207ENST00000426253 NR6A1Q15406 480 aa8.77□□□□□ -1.01
NIF3L1-207ENST00000426253 EPS8L1Q8TE68 723 aa8.77□□□□□ -1.01
NIF3L1-207ENST00000426253 NUDT16Q96DE0 195 aaKnown RBP8.77□□□□□ -1.01
NIF3L1-207ENST00000426253 KRTAP3-3Q9BYR6 98 aa8.77□□□□□ -1.01
NIF3L1-207ENST00000426253 KRTAP3-2Q9BYR7 98 aa8.77□□□□□ -1.01
NIF3L1-207ENST00000426253 COL24A1Q17RW2 1714 aa8.77□□□□□ -1.01
NIF3L1-207ENST00000426253 PHRF1Q9P1Y6 1649 aaKnown RBP8.76□□□□□ -1.01
NIF3L1-207ENST00000426253 POM121CA8CG34 1229 aa8.76□□□□□ -1.01
NIF3L1-207ENST00000426253 NYAP1Q6ZVC0 841 aa8.76□□□□□ -1.01
NIF3L1-207ENST00000426253 PNMA1Q8ND90 353 aa8.76□□□□□ -1.01
NIF3L1-207ENST00000426253 NGDNQ8NEJ9 315 aaKnown RBP8.76□□□□□ -1.01
NIF3L1-207ENST00000426253 GLMNQ92990 594 aa8.76□□□□□ -1.01
NIF3L1-207ENST00000426253 ABHD8Q96I13 439 aa8.76□□□□□ -1.01
NIF3L1-207ENST00000426253 WBP1LQ9NX94 342 aa8.76□□□□□ -1.01
NIF3L1-207ENST00000426253 CCDC85CA6NKD9 419 aa8.75□□□□□ -1.01
NIF3L1-207ENST00000426253 THSD4Q6ZMP0 1018 aa8.75□□□□□ -1.01
NIF3L1-207ENST00000426253 PRR36Q9H6K5 1346 aa8.75□□□□□ -1.01
NIF3L1-207ENST00000426253 EIF3AQ14152 1382 aaKnown RBP8.74□□□□□ -1.01
NIF3L1-207ENST00000426253 ANKARQ7Z5J8 1434 aa8.74□□□□□ -1.01
NIF3L1-207ENST00000426253 HDGFL1Q5TGJ6 251 aa8.74□□□□□ -1.01
NIF3L1-207ENST00000426253 MARCH10Q8NA82 808 aaPredicted RBP8.74□□□□□ -1.01
NIF3L1-207ENST00000426253 QSER1Q2KHR3 1735 aa8.74□□□□□ -1.01
NIF3L1-207ENST00000426253 JUNDP17535 347 aa8.73□□□□□ -1.01
NIF3L1-207ENST00000426253 SOX11P35716 441 aa8.73□□□□□ -1.01
NIF3L1-207ENST00000426253 SRPK2P78362 688 aaKnown RBP8.73□□□□□ -1.01
NIF3L1-207ENST00000426253 PTPRNQ16849 979 aa8.73□□□□□ -1.01
NIF3L1-207ENST00000426253 MSS51Q4VC12 460 aa8.73□□□□□ -1.01
NIF3L1-207ENST00000426253 NUTM2GQ5VZR2 741 aa8.73□□□□□ -1.01
NIF3L1-207ENST00000426253 PRDM10Q9NQV6 1147 aa8.73□□□□□ -1.01
NIF3L1-207ENST00000426253 TFCP2L1Q9NZI6 479 aa8.73□□□□□ -1.01
NIF3L1-207ENST00000426253 PNPLA7Q6ZV29 1317 aa8.73□□□□□ -1.01
NIF3L1-207ENST00000426253 CENPJQ9HC77 1338 aaPredicted RBP8.73□□□□□ -1.01
NIF3L1-207ENST00000426253 FOXN1O15353 648 aa8.72□□□□□ -1.01
NIF3L1-207ENST00000426253 VAC14Q08AM6 782 aa8.72□□□□□ -1.01
NIF3L1-207ENST00000426253 ALG2Q9H553 416 aa8.72□□□□□ -1.01
NIF3L1-207ENST00000426253 CD2APQ9Y5K6 639 aa8.72□□□□□ -1.01
NIF3L1-207ENST00000426253 TONSLQ96HA7 1378 aa8.72□□□□□ -1.01
NIF3L1-207ENST00000426253 CRB1P82279 1406 aa8.71□□□□□ -1.01
NIF3L1-207ENST00000426253 F12P00748 615 aaPredicted RBP8.71□□□□□ -1.02
NIF3L1-207ENST00000426253 MSL1Q68DK7 614 aa8.71□□□□□ -1.02
NIF3L1-207ENST00000426253 SMC1BQ8NDV3 1235 aa8.71□□□□□ -1.02
NIF3L1-207ENST00000426253 ADAMTS19Q8TE59 1207 aa8.71□□□□□ -1.02
NIF3L1-207ENST00000426253 AIDAQ96BJ3 306 aa8.71□□□□□ -1.02
NIF3L1-207ENST00000426253 ACSBG1Q96GR2 724 aa8.71□□□□□ -1.02
NIF3L1-207ENST00000426253 SPSB2Q99619 263 aa8.71□□□□□ -1.02
NIF3L1-207ENST00000426253 ACEP12821 1306 aa8.71□□□□□ -1.02
NIF3L1-207ENST00000426253 IGSF1Q8N6C5 1336 aa8.71□□□□□ -1.02
NIF3L1-207ENST00000426253 BCL9O00512 1426 aa8.71□□□□□ -1.02
NIF3L1-207ENST00000426253 TUBGCP6Q96RT7 1819 aa8.7□□□□□ -1.02
NIF3L1-207ENST00000426253 NHSQ6T4R5 1651 aa8.7□□□□□ -1.02
NIF3L1-207ENST00000426253 LMO7Q8WWI1 1683 aa8.7□□□□□ -1.02
NIF3L1-207ENST00000426253 ZBTB7CA1YPR0 619 aa8.7□□□□□ -1.02
NIF3L1-207ENST00000426253 FAM160A2Q8N612 972 aaPredicted RBP8.7□□□□□ -1.02
NIF3L1-207ENST00000426253 KCTD12Q96CX2 325 aaKnown RBP8.7□□□□□ -1.02
NIF3L1-207ENST00000426253 CARD11Q9BXL7 1154 aa8.7□□□□□ -1.02
NIF3L1-207ENST00000426253 PCGF6Q9BYE7 350 aa8.7□□□□□ -1.02
NIF3L1-207ENST00000426253 LRRC4BQ9NT99 713 aa8.7□□□□□ -1.02
NIF3L1-207ENST00000426253 EVA1BQ9NVM1 165 aa8.7□□□□□ -1.02
NIF3L1-207ENST00000426253 BRD4O60885 1362 aaPredicted RBP8.7□□□□□ -1.02
NIF3L1-207ENST00000426253 ROCK2O75116 1388 aaKnown RBP8.7□□□□□ -1.02
NIF3L1-207ENST00000426253 COL5A2P05997 1499 aaPredicted RBP8.7□□□□□ -1.02
NIF3L1-207ENST00000426253 WNK3Q9BYP7 1800 aa8.69□□□□□ -1.02
NIF3L1-207ENST00000426253 DXOO77932 396 aaKnown RBP8.69□□□□□ -1.02
NIF3L1-207ENST00000426253 CTCFP49711 727 aaPredicted RBP8.69□□□□□ -1.02
NIF3L1-207ENST00000426253 RGS19P49795 217 aa8.69□□□□□ -1.02
NIF3L1-207ENST00000426253 MMP16P51512 607 aa8.69□□□□□ -1.02
NIF3L1-207ENST00000426253 TOM1L2Q6ZVM7 507 aa8.69□□□□□ -1.02
NIF3L1-207ENST00000426253 CABP1Q9NZU7 370 aa8.69□□□□□ -1.02
NIF3L1-207ENST00000426253 FKBPLQ9UIM3 349 aa8.69□□□□□ -1.02
NIF3L1-207ENST00000426253 EVC2Q86UK5 1308 aa8.69□□□□□ -1.02
NIF3L1-207ENST00000426253 ZC3H4Q9UPT8 1303 aaKnown RBP8.69□□□□□ -1.02
NIF3L1-207ENST00000426253 ABTB2Q8N961 1025 aa8.68□□□□□ -1.02
NIF3L1-207ENST00000426253 BTAF1O14981 1849 aa8.67□□□□□ -1.02
NIF3L1-207ENST00000426253 ZPR1O75312 459 aa8.67□□□□□ -1.02
NIF3L1-207ENST00000426253 PDIA4P13667 645 aaKnown RBP8.67□□□□□ -1.02
NIF3L1-207ENST00000426253 LBX1P52954 281 aa8.67□□□□□ -1.02
NIF3L1-207ENST00000426253 COPS2P61201 443 aa8.67□□□□□ -1.02
NIF3L1-207ENST00000426253 EIF4G2P78344 907 aaKnown RBP eCLIP8.67□□□□□ -1.02
NIF3L1-207ENST00000426253 NR1H3Q13133 447 aa8.67□□□□□ -1.02
NIF3L1-207ENST00000426253 KDM2BQ8NHM5 1336 aa8.67□□□□□ -1.02
NIF3L1-207ENST00000426253 RRAGCQ9HB90 399 aa8.67□□□□□ -1.02
NIF3L1-207ENST00000426253 MKRN1Q9UHC7 482 aaKnown RBP8.67□□□□□ -1.02
NIF3L1-207ENST00000426253 CICQ96RK0 1608 aaPredicted RBP8.66□□□□□ -1.02
NIF3L1-207ENST00000426253 POLR3AO14802 1390 aaPredicted RBP8.66□□□□□ -1.02
NIF3L1-207ENST00000426253 POTEMA6NI47 508 aa8.66□□□□□ -1.02
NIF3L1-207ENST00000426253 CCNYL3P0C7X3 344 aa8.66□□□□□ -1.02
NIF3L1-207ENST00000426253 KCNH2Q12809 1159 aa8.66□□□□□ -1.02
NIF3L1-207ENST00000426253 SEMA3FQ13275 785 aa8.66□□□□□ -1.02
NIF3L1-207ENST00000426253 ARMC2Q8NEN0 867 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms