RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 DDX12PQ92771 950 aa7.46□□□□□ -1.22
HERPUD2-204ENST00000426180 SMARCC1Q92922 1105 aaPredicted RBP7.46□□□□□ -1.22
HERPUD2-204ENST00000426180 TSR2Q969E8 191 aaKnown RBP7.46□□□□□ -1.22
HERPUD2-204ENST00000426180 CDCA7LQ96GN5 454 aa7.46□□□□□ -1.22
HERPUD2-204ENST00000426180 MBIPQ9NS73 344 aa7.46□□□□□ -1.22
HERPUD2-204ENST00000426180 TSPYL4Q9UJ04 414 aa7.46□□□□□ -1.22
HERPUD2-204ENST00000426180 EIF4A1P60842 406 aaKnown RBP7.45□□□□□ -1.22
HERPUD2-204ENST00000426180 KCNC4Q03721 635 aa7.45□□□□□ -1.22
HERPUD2-204ENST00000426180 SMIM5Q71RC9 77 aa7.45□□□□□ -1.22
HERPUD2-204ENST00000426180 WDR63Q8IWG1 891 aa7.45□□□□□ -1.22
HERPUD2-204ENST00000426180 DNAJC10Q8IXB1 793 aa7.45□□□□□ -1.22
HERPUD2-204ENST00000426180 TTC5Q8N0Z6 440 aa7.45□□□□□ -1.22
HERPUD2-204ENST00000426180 LINC00116Q8NCU8 138 aa7.45□□□□□ -1.22
HERPUD2-204ENST00000426180 CFAP44Q96MT7 982 aa7.45□□□□□ -1.22
HERPUD2-204ENST00000426180 YTHDC1Q96MU7 727 aaKnown RBP7.45□□□□□ -1.22
HERPUD2-204ENST00000426180 IFT57Q9NWB7 429 aa7.45□□□□□ -1.22
HERPUD2-204ENST00000426180 CCNL1Q9UK58 526 aaPredicted RBP7.45□□□□□ -1.22
HERPUD2-204ENST00000426180 VIRMAQ69YN4 1812 aaKnown RBP7.44□□□□□ -1.22
HERPUD2-204ENST00000426180 ATP6V1AP38606 617 aa7.44□□□□□ -1.22
HERPUD2-204ENST00000426180 GNAI1P63096 354 aa7.44□□□□□ -1.22
HERPUD2-204ENST00000426180 ZNF827Q17R98 1081 aa7.44□□□□□ -1.22
HERPUD2-204ENST00000426180 AMIGO3Q86WK7 504 aa7.44□□□□□ -1.22
HERPUD2-204ENST00000426180 NGEFQ8N5V2 710 aa7.44□□□□□ -1.22
HERPUD2-204ENST00000426180 C8orf58Q8NAV2 365 aa7.44□□□□□ -1.22
HERPUD2-204ENST00000426180 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.44□□□□□ -1.22
HERPUD2-204ENST00000426180 IL16Q14005 1332 aa7.44□□□□□ -1.22
HERPUD2-204ENST00000426180 FANCIQ9NVI1 1328 aa7.44□□□□□ -1.22
HERPUD2-204ENST00000426180 HEG1Q9ULI3 1381 aa7.44□□□□□ -1.22
HERPUD2-204ENST00000426180 KDM3BQ7LBC6 1761 aa7.43□□□□□ -1.22
HERPUD2-204ENST00000426180 CALD1Q05682 793 aaKnown RBP7.43□□□□□ -1.22
HERPUD2-204ENST00000426180 SLFN5Q08AF3 891 aa7.43□□□□□ -1.22
HERPUD2-204ENST00000426180 SLC27A3Q5K4L6 730 aa7.43□□□□□ -1.22
HERPUD2-204ENST00000426180 PACS2Q86VP3 889 aa7.43□□□□□ -1.22
HERPUD2-204ENST00000426180 TSPYL6Q8N831 410 aa7.43□□□□□ -1.22
HERPUD2-204ENST00000426180 FMNL2Q96PY5 1086 aa7.43□□□□□ -1.22
HERPUD2-204ENST00000426180 BABAM1Q9NWV8 329 aa7.43□□□□□ -1.22
HERPUD2-204ENST00000426180 TSR3Q9UJK0 312 aaKnown RBP7.43□□□□□ -1.22
HERPUD2-204ENST00000426180 USP16Q9Y5T5 823 aa7.43□□□□□ -1.22
HERPUD2-204ENST00000426180 LY75O60449 1722 aa7.43□□□□□ -1.22
HERPUD2-204ENST00000426180 UBR2Q8IWV8 1755 aa7.43□□□□□ -1.22
HERPUD2-204ENST00000426180 RREB1Q92766 1687 aa7.42□□□□□ -1.22
HERPUD2-204ENST00000426180 TJP1Q07157 1748 aa7.42□□□□□ -1.22
HERPUD2-204ENST00000426180 ELL2O00472 640 aaPredicted RBP7.42□□□□□ -1.22
HERPUD2-204ENST00000426180 GIGYF1O75420 1035 aaPredicted RBP7.42□□□□□ -1.22
HERPUD2-204ENST00000426180 CYP19A1P11511 503 aaPredicted RBP7.42□□□□□ -1.22
HERPUD2-204ENST00000426180 PIP4K2AP48426 406 aaPredicted RBP7.42□□□□□ -1.22
HERPUD2-204ENST00000426180 EXOSC9Q06265 439 aaKnown RBP7.42□□□□□ -1.22
HERPUD2-204ENST00000426180 TRMT2AQ8IZ69 625 aaKnown RBP7.42□□□□□ -1.22
HERPUD2-204ENST00000426180 VSIG10Q8N0Z9 540 aa7.42□□□□□ -1.22
HERPUD2-204ENST00000426180 NECTIN2Q92692 538 aa7.42□□□□□ -1.22
HERPUD2-204ENST00000426180 LRCH3Q96II8 777 aa7.42□□□□□ -1.22
HERPUD2-204ENST00000426180 HPS5Q9UPZ3 1129 aa7.42□□□□□ -1.22
HERPUD2-204ENST00000426180 ZBED9Q6R2W3 1325 aa7.42□□□□□ -1.22
HERPUD2-204ENST00000426180 NUP188Q5SRE5 1749 aa7.41□□□□□ -1.22
HERPUD2-204ENST00000426180 RGPD3A6NKT7 1758 aaPredicted RBP7.41□□□□□ -1.22
HERPUD2-204ENST00000426180 RGPD4Q7Z3J3 1758 aa7.41□□□□□ -1.22
HERPUD2-204ENST00000426180 E9PSI1 815 aa7.41□□□□□ -1.22
HERPUD2-204ENST00000426180 A1BGP04217 495 aa7.41□□□□□ -1.22
HERPUD2-204ENST00000426180 SNRPA1P09661 255 aaKnown RBP7.41□□□□□ -1.22
HERPUD2-204ENST00000426180 CRKLP46109 303 aaKnown RBP7.41□□□□□ -1.22
HERPUD2-204ENST00000426180 DUSP27Q5VZP5 1158 aa7.41□□□□□ -1.22
HERPUD2-204ENST00000426180 INTS5Q6P9B9 1019 aaKnown RBP7.41□□□□□ -1.22
HERPUD2-204ENST00000426180 C5P01031 1676 aa7.41□□□□□ -1.22
HERPUD2-204ENST00000426180 NBPF26B4DH59 902 aa7.4□□□□□ -1.22
HERPUD2-204ENST00000426180 TCERG1O14776 1098 aaKnown RBP7.4□□□□□ -1.22
HERPUD2-204ENST00000426180 MAP3K7O43318 606 aa7.4□□□□□ -1.22
HERPUD2-204ENST00000426180 ANXA1P04083 346 aa7.4□□□□□ -1.22
HERPUD2-204ENST00000426180 EIF2S2P20042 333 aaKnown RBP7.4□□□□□ -1.22
HERPUD2-204ENST00000426180 NBR1Q14596 966 aa7.4□□□□□ -1.22
HERPUD2-204ENST00000426180 PROSER3Q2NL68 480 aa7.4□□□□□ -1.22
HERPUD2-204ENST00000426180 NBPF14Q5TI25 921 aa7.4□□□□□ -1.22
HERPUD2-204ENST00000426180 NBPF10Q6P3W6 841 aaKnown RBP7.4□□□□□ -1.22
HERPUD2-204ENST00000426180 NBPF15Q8N660 670 aa7.4□□□□□ -1.22
HERPUD2-204ENST00000426180 PDGFDQ9GZP0 370 aaPredicted RBP7.4□□□□□ -1.22
HERPUD2-204ENST00000426180 MYH16Q9H6N6 1097 aa7.4□□□□□ -1.22
HERPUD2-204ENST00000426180 CCDC87Q9NVE4 849 aa7.4□□□□□ -1.22
HERPUD2-204ENST00000426180 ZBTB1Q9Y2K1 713 aa7.4□□□□□ -1.22
HERPUD2-204ENST00000426180 KAT6BQ8WYB5 2073 aa7.4□□□□□ -1.23
HERPUD2-204ENST00000426180 C4BP0C0L5 1744 aa7.39□□□□□ -1.23
HERPUD2-204ENST00000426180 ZNF831Q5JPB2 1677 aa7.39□□□□□ -1.23
HERPUD2-204ENST00000426180 CICQ96RK0 1608 aaPredicted RBP7.39□□□□□ -1.23
HERPUD2-204ENST00000426180 CNTNAP4Q9C0A0 1308 aa7.39□□□□□ -1.23
HERPUD2-204ENST00000426180 GNPATO15228 680 aa7.39□□□□□ -1.23
HERPUD2-204ENST00000426180 VAMP4O75379 141 aa7.39□□□□□ -1.23
HERPUD2-204ENST00000426180 CANXP27824 592 aaKnown RBP7.39□□□□□ -1.23
HERPUD2-204ENST00000426180 PPP4CP60510 307 aa7.39□□□□□ -1.23
HERPUD2-204ENST00000426180 R3HDM1Q15032 1099 aaKnown RBP7.39□□□□□ -1.23
HERPUD2-204ENST00000426180 PDIA6Q15084 440 aa7.39□□□□□ -1.23
HERPUD2-204ENST00000426180 SLC15A2Q16348 729 aa7.39□□□□□ -1.23
HERPUD2-204ENST00000426180 TWISTNBQ3B726 338 aaPredicted RBP7.39□□□□□ -1.23
HERPUD2-204ENST00000426180 RC3H1Q5TC82 1133 aaKnown RBP7.39□□□□□ -1.23
HERPUD2-204ENST00000426180 BBXQ8WY36 941 aaPredicted RBP7.39□□□□□ -1.23
HERPUD2-204ENST00000426180 STK32BQ9NY57 414 aa7.39□□□□□ -1.23
HERPUD2-204ENST00000426180 TSKSQ9UJT2 592 aa7.39□□□□□ -1.23
HERPUD2-204ENST00000426180 SOS1Q07889 1333 aaPredicted RBP7.38□□□□□ -1.23
HERPUD2-204ENST00000426180 PNPLA7Q6ZV29 1317 aa7.38□□□□□ -1.23
HERPUD2-204ENST00000426180 SPDYE16A6NNV3 312 aaPredicted RBP7.38□□□□□ -1.23
HERPUD2-204ENST00000426180 STARD3NLO95772 234 aa7.38□□□□□ -1.23
HERPUD2-204ENST00000426180 TSR1Q2NL82 804 aaKnown RBP7.38□□□□□ -1.23
HERPUD2-204ENST00000426180 HDGFL1Q5TGJ6 251 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms