RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 ANKRD44Q8N8A2 993 aa19.75■□□□□ 0.75
SCRN1-205ENST00000425819 BCL2L12Q9HB09 334 aa19.75■□□□□ 0.75
SCRN1-205ENST00000425819 UBN2Q6ZU65 1347 aa19.75■□□□□ 0.75
SCRN1-205ENST00000425819 USP42Q9H9J4 1324 aaKnown RBP19.75■□□□□ 0.75
SCRN1-205ENST00000425819 H7C1W4 665 aa19.74■□□□□ 0.75
SCRN1-205ENST00000425819 CLEC4GQ6UXB4 293 aa19.74■□□□□ 0.75
SCRN1-205ENST00000425819 HDAC5Q9UQL6 1122 aa19.74■□□□□ 0.75
SCRN1-205ENST00000425819 NIP7Q9Y221 180 aaKnown RBP eCLIP19.74■□□□□ 0.75
SCRN1-205ENST00000425819 NUP98P52948 1817 aa19.74■□□□□ 0.75
SCRN1-205ENST00000425819 CASP7P55210 303 aa19.74■□□□□ 0.75
SCRN1-205ENST00000425819 CENPQQ7L2Z9 268 aaPredicted RBP19.74■□□□□ 0.75
SCRN1-205ENST00000425819 BCORQ6W2J9 1755 aa19.74■□□□□ 0.75
SCRN1-205ENST00000425819 UBR3Q6ZT12 1888 aa19.73■□□□□ 0.75
SCRN1-205ENST00000425819 CCDC125Q86Z20 511 aa19.73■□□□□ 0.75
SCRN1-205ENST00000425819 SCN7AQ01118 1682 aa19.72■□□□□ 0.75
SCRN1-205ENST00000425819 FAM177BA6PVY3 158 aa19.72■□□□□ 0.75
SCRN1-205ENST00000425819 RGL2O15211 777 aa19.72■□□□□ 0.75
SCRN1-205ENST00000425819 TBC1D9BQ66K14 1250 aa19.72■□□□□ 0.75
SCRN1-205ENST00000425819 BICDL1Q6ZP65 573 aa19.72■□□□□ 0.75
SCRN1-205ENST00000425819 FAM89AQ96GI7 184 aa19.72■□□□□ 0.75
SCRN1-205ENST00000425819 KAZALD1Q96I82 304 aa19.72■□□□□ 0.75
SCRN1-205ENST00000425819 ANKRD36CQ5JPF3 1778 aa19.72■□□□□ 0.75
SCRN1-205ENST00000425819 PCCAP05165 728 aaPredicted RBP19.71■□□□□ 0.75
SCRN1-205ENST00000425819 ATP8B2P98198 1209 aa19.71■□□□□ 0.75
SCRN1-205ENST00000425819 SUSD4Q5VX71 490 aa19.71■□□□□ 0.75
SCRN1-205ENST00000425819 ZBTB38Q8NAP3 1195 aaPredicted RBP19.71■□□□□ 0.75
SCRN1-205ENST00000425819 BICC1Q9H694 974 aaKnown RBP19.71■□□□□ 0.75
SCRN1-205ENST00000425819 ANO8Q9HCE9 1232 aaPredicted RBP19.71■□□□□ 0.75
SCRN1-205ENST00000425819 TRMT112Q9UI30 125 aaKnown RBP19.71■□□□□ 0.75
SCRN1-205ENST00000425819 C4AP0C0L4 1744 aa19.71■□□□□ 0.75
SCRN1-205ENST00000425819 PNMA6EA0A0J9YXQ4 647 aa19.7■□□□□ 0.74
SCRN1-205ENST00000425819 PARP10Q53GL7 1025 aa19.7■□□□□ 0.74
SCRN1-205ENST00000425819 EPHA10Q5JZY3 1008 aa19.7■□□□□ 0.74
SCRN1-205ENST00000425819 PPP1R42Q7Z4L9 355 aa19.7■□□□□ 0.74
SCRN1-205ENST00000425819 MSH5O43196 834 aa19.7■□□□□ 0.74
SCRN1-205ENST00000425819 HMMRO75330 724 aa19.7■□□□□ 0.74
SCRN1-205ENST00000425819 SYNE4Q8N205 404 aa19.7■□□□□ 0.74
SCRN1-205ENST00000425819 STK32BQ9NY57 414 aa19.7■□□□□ 0.74
SCRN1-205ENST00000425819 COL23A1Q86Y22 540 aaPredicted RBP19.69■□□□□ 0.74
SCRN1-205ENST00000425819 UTP14AQ9BVJ6 771 aaKnown RBP19.69■□□□□ 0.74
SCRN1-205ENST00000425819 SRGAP3O43295 1099 aa19.68■□□□□ 0.74
SCRN1-205ENST00000425819 GYS1P13807 737 aa19.67■□□□□ 0.74
SCRN1-205ENST00000425819 SLC15A2Q16348 729 aa19.67■□□□□ 0.74
SCRN1-205ENST00000425819 FLAD1Q8NFF5 587 aa19.67■□□□□ 0.74
SCRN1-205ENST00000425819 SETDB2Q96T68 719 aa19.67■□□□□ 0.74
SCRN1-205ENST00000425819 PNPLA7Q6ZV29 1317 aa19.67■□□□□ 0.74
SCRN1-205ENST00000425819 NTSR2O95665 410 aa19.66■□□□□ 0.74
SCRN1-205ENST00000425819 FOXO4P98177 505 aa19.66■□□□□ 0.74
SCRN1-205ENST00000425819 MTX1Q13505 466 aa19.66■□□□□ 0.74
SCRN1-205ENST00000425819 CDHR2Q9BYE9 1310 aa19.66■□□□□ 0.74
SCRN1-205ENST00000425819 IRS4O14654 1257 aaPredicted RBP19.66■□□□□ 0.74
SCRN1-205ENST00000425819 POLA2Q14181 598 aa19.66■□□□□ 0.74
SCRN1-205ENST00000425819 SMC5Q8IY18 1101 aa19.66■□□□□ 0.74
SCRN1-205ENST00000425819 SSH3Q8TE77 659 aa19.66■□□□□ 0.74
SCRN1-205ENST00000425819 SH3TC1Q8TE82 1336 aa19.65■□□□□ 0.74
SCRN1-205ENST00000425819 NFIXQ14938 502 aa19.65■□□□□ 0.74
SCRN1-205ENST00000425819 RABL6Q3YEC7 729 aaPredicted RBP19.65■□□□□ 0.74
SCRN1-205ENST00000425819 LMBR1LQ6UX01 489 aa19.65■□□□□ 0.74
SCRN1-205ENST00000425819 NUTM1Q86Y26 1132 aa19.65■□□□□ 0.74
SCRN1-205ENST00000425819 UPF1Q92900 1129 aaKnown RBP eCLIP19.65■□□□□ 0.741e-14■■■□□ 18.5
SCRN1-205ENST00000425819 DCTPP1Q9H773 170 aa19.65■□□□□ 0.74
SCRN1-205ENST00000425819 TUBGCP6Q96RT7 1819 aa19.64■□□□□ 0.73
SCRN1-205ENST00000425819 GCC1Q96CN9 775 aa19.64■□□□□ 0.73
SCRN1-205ENST00000425819 CHMP3Q9Y3E7 222 aa19.64■□□□□ 0.73
SCRN1-205ENST00000425819 SKAP1Q86WV1 359 aa19.63■□□□□ 0.73
SCRN1-205ENST00000425819 NBPF5PQ86XG9 351 aaPredicted RBP19.63■□□□□ 0.73
SCRN1-205ENST00000425819 PLA2G12BQ9BX93 195 aa19.63■□□□□ 0.73
SCRN1-205ENST00000425819 HCLS1P14317 486 aaPredicted RBP19.62■□□□□ 0.73
SCRN1-205ENST00000425819 PDZRN3Q9UPQ7 1066 aa19.62■□□□□ 0.73
SCRN1-205ENST00000425819 EXOC6BQ9Y2D4 811 aa19.62■□□□□ 0.73
SCRN1-205ENST00000425819 APBB1O00213 710 aa19.61■□□□□ 0.73
SCRN1-205ENST00000425819 GTF2E1P29083 439 aaPredicted RBP19.61■□□□□ 0.73
SCRN1-205ENST00000425819 ERFEQ4G0M1 354 aa19.61■□□□□ 0.73
SCRN1-205ENST00000425819 CCDC85AQ96PX6 553 aaPredicted RBP19.61■□□□□ 0.73
SCRN1-205ENST00000425819 NYXQ9GZU5 481 aa19.61■□□□□ 0.73
SCRN1-205ENST00000425819 CARMIL3Q8ND23 1372 aa19.61■□□□□ 0.73
SCRN1-205ENST00000425819 PDE8AO60658 829 aa19.61■□□□□ 0.73
SCRN1-205ENST00000425819 PA2G4Q9UQ80 394 aaKnown RBP19.61■□□□□ 0.73
SCRN1-205ENST00000425819 SURF6O75683 361 aaKnown RBP19.6■□□□□ 0.73
SCRN1-205ENST00000425819 CTSWP56202 376 aa19.6■□□□□ 0.73
SCRN1-205ENST00000425819 ANKRD45Q5TZF3 282 aa19.6■□□□□ 0.73
SCRN1-205ENST00000425819 NPHP1O15259 732 aa19.59■□□□□ 0.73
SCRN1-205ENST00000425819 TM4SF1P30408 202 aa19.59■□□□□ 0.73
SCRN1-205ENST00000425819 TPTE2Q6XPS3 522 aa19.59■□□□□ 0.73
SCRN1-205ENST00000425819 CCDC24Q8N4L8 307 aa19.59■□□□□ 0.73
SCRN1-205ENST00000425819 KLHDC4Q8TBB5 520 aa19.59■□□□□ 0.73
SCRN1-205ENST00000425819 COL24A1Q17RW2 1714 aa19.59■□□□□ 0.73
SCRN1-205ENST00000425819 CSF1RP07333 972 aa19.58■□□□□ 0.73
SCRN1-205ENST00000425819 RFX5P48382 616 aaPredicted RBP19.58■□□□□ 0.73
SCRN1-205ENST00000425819 NUCB1Q02818 461 aa19.58■□□□□ 0.73
SCRN1-205ENST00000425819 FAM161AQ3B820 660 aa19.58■□□□□ 0.73
SCRN1-205ENST00000425819 MSL1Q68DK7 614 aa19.58■□□□□ 0.73
SCRN1-205ENST00000425819 NLGN1Q8N2Q7 840 aa19.58■□□□□ 0.73
SCRN1-205ENST00000425819 TTLL11Q8NHH1 800 aa19.58■□□□□ 0.73
SCRN1-205ENST00000425819 ABCC12Q96J65 1359 aa19.58■□□□□ 0.72
SCRN1-205ENST00000425819 HSP90B1P14625 803 aaKnown RBP19.57■□□□□ 0.72
SCRN1-205ENST00000425819 DDR1Q08345 913 aa19.57■□□□□ 0.72
SCRN1-205ENST00000425819 BCL11AQ9H165 835 aa19.57■□□□□ 0.72
SCRN1-205ENST00000425819 SERPINB2P05120 415 aa19.57■□□□□ 0.72
SCRN1-205ENST00000425819 CNBD1Q8NA66 436 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms