RNA–Protein interactions for RNA: ENST00000425441.5

CCDC12-202, Transcript of coiled-coil domain containing 12, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC12, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-202ENST00000425441 KIF6Q6ZMV9 814 aa17.34■□□□□ 0.37
CCDC12-202ENST00000425441 MIS18AQ9NYP9 233 aa17.34■□□□□ 0.37
CCDC12-202ENST00000425441 MAPK8IP3Q9UPT6 1336 aa17.34■□□□□ 0.37
CCDC12-202ENST00000425441 NFE2L2Q16236 605 aa17.33■□□□□ 0.36
CCDC12-202ENST00000425441 HLFQ16534 295 aa17.33■□□□□ 0.36
CCDC12-202ENST00000425441 L3MBTL3Q96JM7 780 aaPredicted RBP17.33■□□□□ 0.36
CCDC12-202ENST00000425441 MAP3K15Q6ZN16 1313 aa17.32■□□□□ 0.36
CCDC12-202ENST00000425441 EIF4A1P60842 406 aaKnown RBP17.32■□□□□ 0.36
CCDC12-202ENST00000425441 RALBP1Q15311 655 aa17.32■□□□□ 0.36
CCDC12-202ENST00000425441 CREBZFQ9NS37 354 aa17.32■□□□□ 0.36
CCDC12-202ENST00000425441 NUP98P52948 1817 aa17.32■□□□□ 0.36
CCDC12-202ENST00000425441 IBTKQ9P2D0 1353 aaPredicted RBP17.31■□□□□ 0.36
CCDC12-202ENST00000425441 ERBB4Q15303 1308 aa17.31■□□□□ 0.36
CCDC12-202ENST00000425441 MYBBP1AQ9BQG0 1328 aaKnown RBP17.31■□□□□ 0.36
CCDC12-202ENST00000425441 CC2D2BQ6DHV5 1058 aa17.31■□□□□ 0.36
CCDC12-202ENST00000425441 LDHDQ86WU2 507 aa17.31■□□□□ 0.36
CCDC12-202ENST00000425441 NGEFQ8N5V2 710 aa17.31■□□□□ 0.36
CCDC12-202ENST00000425441 PLEKHF1Q96S99 279 aa17.31■□□□□ 0.36
CCDC12-202ENST00000425441 PRKRIP1Q9H875 184 aaPredicted RBP17.31■□□□□ 0.36
CCDC12-202ENST00000425441 RRP7AQ9Y3A4 280 aaKnown RBP17.31■□□□□ 0.36
CCDC12-202ENST00000425441 RIC1Q4ADV7 1423 aa17.3■□□□□ 0.36
CCDC12-202ENST00000425441 HSPA1AP0DMV8 641 aaKnown RBP17.3■□□□□ 0.36
CCDC12-202ENST00000425441 HSPA1BP0DMV9 641 aaKnown RBP17.3■□□□□ 0.36
CCDC12-202ENST00000425441 IARSP41252 1262 aaKnown RBP17.3■□□□□ 0.36
CCDC12-202ENST00000425441 ZNF277Q9NRM2 450 aaPredicted RBP17.3■□□□□ 0.36
CCDC12-202ENST00000425441 GRIPAP1Q4V328 841 aa17.29■□□□□ 0.36
CCDC12-202ENST00000425441 COL13A1Q5TAT6 717 aaPredicted RBP17.29■□□□□ 0.36
CCDC12-202ENST00000425441 RPGRQ92834 1020 aaKnown RBP17.29■□□□□ 0.36
CCDC12-202ENST00000425441 TAF1DQ9H5J8 278 aaPredicted RBP17.29■□□□□ 0.36
CCDC12-202ENST00000425441 HACL1Q9UJ83 578 aa17.29■□□□□ 0.36
CCDC12-202ENST00000425441 FARP1Q9Y4F1 1045 aaPredicted RBP17.29■□□□□ 0.36
CCDC12-202ENST00000425441 MYL6BP14649 208 aa17.28■□□□□ 0.36
CCDC12-202ENST00000425441 CRY2Q49AN0 593 aa17.28■□□□□ 0.36
CCDC12-202ENST00000425441 SYNE4Q8N205 404 aa17.28■□□□□ 0.36
CCDC12-202ENST00000425441 PSMD1Q99460 953 aa17.28■□□□□ 0.36
CCDC12-202ENST00000425441 ABCC12Q96J65 1359 aa17.28■□□□□ 0.36
CCDC12-202ENST00000425441 ANP32CO43423 234 aa17.27■□□□□ 0.36
CCDC12-202ENST00000425441 POTEIP0CG38 1075 aa17.27■□□□□ 0.36
CCDC12-202ENST00000425441 POTEJP0CG39 1038 aa17.27■□□□□ 0.36
CCDC12-202ENST00000425441 TTLL7Q6ZT98 887 aa17.27■□□□□ 0.36
CCDC12-202ENST00000425441 NUTM1Q86Y26 1132 aa17.27■□□□□ 0.36
CCDC12-202ENST00000425441 TNS4Q8IZW8 715 aa17.27■□□□□ 0.36
CCDC12-202ENST00000425441 JDP2Q8WYK2 163 aa17.27■□□□□ 0.36
CCDC12-202ENST00000425441 ZNF541Q9H0D2 1346 aa17.26■□□□□ 0.35
CCDC12-202ENST00000425441 FZD9O00144 591 aa17.26■□□□□ 0.35
CCDC12-202ENST00000425441 OLFM4Q6UX06 510 aa17.26■□□□□ 0.35
CCDC12-202ENST00000425441 PPP1R42Q7Z4L9 355 aa17.26■□□□□ 0.35
CCDC12-202ENST00000425441 PNMA8AQ86V59 439 aaPredicted RBP17.26■□□□□ 0.35
CCDC12-202ENST00000425441 RBM17Q96I25 401 aaKnown RBP17.26■□□□□ 0.35
CCDC12-202ENST00000425441 THUMPD2Q9BTF0 503 aaKnown RBP17.26■□□□□ 0.35
CCDC12-202ENST00000425441 ZBTB3Q9H5J0 574 aa17.26■□□□□ 0.35
CCDC12-202ENST00000425441 TSPYL4Q9UJ04 414 aa17.26■□□□□ 0.35
CCDC12-202ENST00000425441 PASKQ96RG2 1323 aa17.25■□□□□ 0.35
CCDC12-202ENST00000425441 CD44P16070 742 aaKnown RBP17.25■□□□□ 0.35
CCDC12-202ENST00000425441 GPTP24298 496 aa17.25■□□□□ 0.35
CCDC12-202ENST00000425441 HOXA10P31260 410 aaPredicted RBP17.25■□□□□ 0.35
CCDC12-202ENST00000425441 EPHX2P34913 555 aa17.25■□□□□ 0.35
CCDC12-202ENST00000425441 EIF6P56537 245 aaKnown RBP17.25■□□□□ 0.35
CCDC12-202ENST00000425441 LMOD3Q0VAK6 560 aa17.25■□□□□ 0.35
CCDC12-202ENST00000425441 PARP10Q53GL7 1025 aa17.25■□□□□ 0.35
CCDC12-202ENST00000425441 EAPPQ56P03 285 aaPredicted RBP17.25■□□□□ 0.35
CCDC12-202ENST00000425441 GIGYF2Q6Y7W6 1299 aaKnown RBP17.25■□□□□ 0.35
CCDC12-202ENST00000425441 GPC2Q8N158 579 aa17.25■□□□□ 0.35
CCDC12-202ENST00000425441 BABAM1Q9NWV8 329 aa17.25■□□□□ 0.35
CCDC12-202ENST00000425441 UBN2Q6ZU65 1347 aa17.24■□□□□ 0.35
CCDC12-202ENST00000425441 SNED1Q8TER0 1413 aa17.24■□□□□ 0.35
CCDC12-202ENST00000425441 SUSD4Q5VX71 490 aa17.24■□□□□ 0.35
CCDC12-202ENST00000425441 ZNF34Q8IZ26 560 aa17.24■□□□□ 0.35
CCDC12-202ENST00000425441 CRAMP1Q96RY5 1269 aa17.24■□□□□ 0.35
CCDC12-202ENST00000425441 TMX4Q9H1E5 349 aaPredicted RBP17.24■□□□□ 0.35
CCDC12-202ENST00000425441 MKRN1Q9UHC7 482 aaKnown RBP17.24■□□□□ 0.35
CCDC12-202ENST00000425441 ADAMTSL1Q8N6G6 1762 aa17.23■□□□□ 0.35
CCDC12-202ENST00000425441 NTSR2O95665 410 aa17.23■□□□□ 0.35
CCDC12-202ENST00000425441 RIPK4P57078 832 aa17.23■□□□□ 0.35
CCDC12-202ENST00000425441 DIEXFQ68CQ4 756 aaKnown RBP17.23■□□□□ 0.35
CCDC12-202ENST00000425441 CNTNAP1P78357 1384 aa17.23■□□□□ 0.35
CCDC12-202ENST00000425441 RNF123Q5XPI4 1314 aa17.22■□□□□ 0.35
CCDC12-202ENST00000425441 TMEM88BA6NKF7 163 aa17.22■□□□□ 0.35
CCDC12-202ENST00000425441 PPEF1O14829 653 aaPredicted RBP17.22■□□□□ 0.35
CCDC12-202ENST00000425441 NLRP3Q96P20 1036 aa17.22■□□□□ 0.35
CCDC12-202ENST00000425441 ITGBL1O95965 494 aaPredicted RBP17.21■□□□□ 0.35
CCDC12-202ENST00000425441 EIF2S2P20042 333 aaKnown RBP17.21■□□□□ 0.35
CCDC12-202ENST00000425441 LMOD1P29536 600 aaPredicted RBP17.21■□□□□ 0.35
CCDC12-202ENST00000425441 HSP90AB3PQ58FF7 597 aa17.21■□□□□ 0.35
CCDC12-202ENST00000425441 ANKRD36CQ5JPF3 1778 aa17.2■□□□□ 0.34
CCDC12-202ENST00000425441 LHX8Q68G74 356 aa17.2■□□□□ 0.34
CCDC12-202ENST00000425441 LARGE2Q8N3Y3 721 aa17.2■□□□□ 0.34
CCDC12-202ENST00000425441 UTP14AQ9BVJ6 771 aaKnown RBP17.2■□□□□ 0.34
CCDC12-202ENST00000425441 CLCN6P51797 869 aa17.19■□□□□ 0.34
CCDC12-202ENST00000425441 SLC10A5Q5PT55 438 aa17.19■□□□□ 0.34
CCDC12-202ENST00000425441 NIM1KQ8IY84 436 aa17.19■□□□□ 0.34
CCDC12-202ENST00000425441 CNTROBQ8N137 903 aa17.19■□□□□ 0.34
CCDC12-202ENST00000425441 VPS33BQ9H267 617 aa17.19■□□□□ 0.34
CCDC12-202ENST00000425441 GJA3Q9Y6H8 435 aa17.19■□□□□ 0.34
CCDC12-202ENST00000425441 TMPOP42166 694 aaKnown RBP17.18■□□□□ 0.34
CCDC12-202ENST00000425441 SUPT20HQ8NEM7 779 aa17.18■□□□□ 0.34
CCDC12-202ENST00000425441 PDIA6Q15084 440 aa17.17■□□□□ 0.34
CCDC12-202ENST00000425441 LRP10Q7Z4F1 713 aa17.17■□□□□ 0.34
CCDC12-202ENST00000425441 AIDAQ96BJ3 306 aa17.17■□□□□ 0.34
CCDC12-202ENST00000425441 ATP6V0A2Q9Y487 856 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms