RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 COL15A1P39059 1388 aa12.9□□□□□ -0.34
MDC1-205ENST00000425072 EN1Q05925 392 aaPredicted RBP12.89□□□□□ -0.35
MDC1-205ENST00000425072 ZBTB38Q8NAP3 1195 aaPredicted RBP12.89□□□□□ -0.35
MDC1-205ENST00000425072 GCC1Q96CN9 775 aa12.89□□□□□ -0.35
MDC1-205ENST00000425072 NUP98P52948 1817 aa12.88□□□□□ -0.35
MDC1-205ENST00000425072 IGHDP01880 384 aa12.88□□□□□ -0.35
MDC1-205ENST00000425072 PCCAP05165 728 aaPredicted RBP12.88□□□□□ -0.35
MDC1-205ENST00000425072 NLRP10Q86W26 655 aa12.88□□□□□ -0.35
MDC1-205ENST00000425072 SETDB2Q96T68 719 aa12.88□□□□□ -0.35
MDC1-205ENST00000425072 ZBTB47Q9UFB7 747 aaPredicted RBP12.88□□□□□ -0.35
MDC1-205ENST00000425072 LRRFIP2Q9Y608 721 aaKnown RBP12.88□□□□□ -0.35
MDC1-205ENST00000425072 RREB1Q92766 1687 aa12.88□□□□□ -0.35
MDC1-205ENST00000425072 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.87□□□□□ -0.35
MDC1-205ENST00000425072 EZH2Q15910 746 aaKnown RBP12.87□□□□□ -0.35
MDC1-205ENST00000425072 USPL1Q5W0Q7 1092 aa12.87□□□□□ -0.35
MDC1-205ENST00000425072 CEP85Q6P2H3 762 aa12.87□□□□□ -0.35
MDC1-205ENST00000425072 PELP1Q8IZL8 1130 aaKnown RBP12.87□□□□□ -0.35
MDC1-205ENST00000425072 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
MDC1-205ENST00000425072 UTP14AQ9BVJ6 771 aaKnown RBP12.87□□□□□ -0.35
MDC1-205ENST00000425072 C1orf115Q9H7X2 142 aa12.87□□□□□ -0.35
MDC1-205ENST00000425072 STK32BQ9NY57 414 aa12.87□□□□□ -0.35
MDC1-205ENST00000425072 TRMT112Q9UI30 125 aaKnown RBP12.87□□□□□ -0.35
MDC1-205ENST00000425072 NIP7Q9Y221 180 aaKnown RBP eCLIP12.87□□□□□ -0.35
MDC1-205ENST00000425072 C4BP0C0L5 1744 aa12.87□□□□□ -0.35
MDC1-205ENST00000425072 N4BP2Q86UW6 1770 aaPredicted RBP12.86□□□□□ -0.35
MDC1-205ENST00000425072 ARFGEF2Q9Y6D5 1785 aa12.86□□□□□ -0.35
MDC1-205ENST00000425072 GPTP24298 496 aa12.86□□□□□ -0.35
MDC1-205ENST00000425072 HSP90AB4PQ58FF6 505 aa12.86□□□□□ -0.35
MDC1-205ENST00000425072 TPTE2Q6XPS3 522 aa12.86□□□□□ -0.35
MDC1-205ENST00000425072 UBE3BQ7Z3V4 1068 aa12.86□□□□□ -0.35
MDC1-205ENST00000425072 NYXQ9GZU5 481 aa12.86□□□□□ -0.35
MDC1-205ENST00000425072 DCTPP1Q9H773 170 aa12.86□□□□□ -0.35
MDC1-205ENST00000425072 PHF14O94880 888 aa12.85□□□□□ -0.35
MDC1-205ENST00000425072 GTF2E1P29083 439 aaPredicted RBP12.85□□□□□ -0.35
MDC1-205ENST00000425072 MTX1Q13505 466 aa12.85□□□□□ -0.35
MDC1-205ENST00000425072 SIRT2Q8IXJ6 389 aa12.85□□□□□ -0.35
MDC1-205ENST00000425072 NLGN1Q8N2Q7 840 aa12.85□□□□□ -0.35
MDC1-205ENST00000425072 SSH3Q8TE77 659 aa12.85□□□□□ -0.35
MDC1-205ENST00000425072 AFDNP55196 1824 aaKnown RBP12.85□□□□□ -0.35
MDC1-205ENST00000425072 RGPD3A6NKT7 1758 aaPredicted RBP12.84□□□□□ -0.35
MDC1-205ENST00000425072 RGPD4Q7Z3J3 1758 aa12.84□□□□□ -0.35
MDC1-205ENST00000425072 SRGAP3O43295 1099 aa12.84□□□□□ -0.35
MDC1-205ENST00000425072 CASP7P55210 303 aa12.84□□□□□ -0.35
MDC1-205ENST00000425072 SLC15A2Q16348 729 aa12.84□□□□□ -0.35
MDC1-205ENST00000425072 DEFB132Q7Z7B7 95 aa12.84□□□□□ -0.35
MDC1-205ENST00000425072 SMC5Q8IY18 1101 aa12.84□□□□□ -0.35
MDC1-205ENST00000425072 FAM89AQ96GI7 184 aa12.84□□□□□ -0.35
MDC1-205ENST00000425072 SUCLG2Q96I99 432 aa12.84□□□□□ -0.35
MDC1-205ENST00000425072 PLA2G12BQ9BX93 195 aa12.84□□□□□ -0.35
MDC1-205ENST00000425072 NUP188Q5SRE5 1749 aa12.84□□□□□ -0.35
MDC1-205ENST00000425072 KDM2BQ8NHM5 1336 aa12.84□□□□□ -0.35
MDC1-205ENST00000425072 SH3TC1Q8TE82 1336 aa12.84□□□□□ -0.35
MDC1-205ENST00000425072 CDHR2Q9BYE9 1310 aa12.84□□□□□ -0.35
MDC1-205ENST00000425072 USP42Q9H9J4 1324 aaKnown RBP12.84□□□□□ -0.35
MDC1-205ENST00000425072 POLA2Q14181 598 aa12.83□□□□□ -0.36
MDC1-205ENST00000425072 SUSD4Q5VX71 490 aa12.83□□□□□ -0.36
MDC1-205ENST00000425072 BICC1Q9H694 974 aaKnown RBP12.83□□□□□ -0.36
MDC1-205ENST00000425072 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
MDC1-205ENST00000425072 IRS4O14654 1257 aaPredicted RBP12.82□□□□□ -0.36
MDC1-205ENST00000425072 PDE8AO60658 829 aa12.82□□□□□ -0.36
MDC1-205ENST00000425072 RAB11FIP3O75154 756 aa12.82□□□□□ -0.36
MDC1-205ENST00000425072 FOXO4P98177 505 aa12.82□□□□□ -0.36
MDC1-205ENST00000425072 RABL6Q3YEC7 729 aaPredicted RBP12.82□□□□□ -0.36
MDC1-205ENST00000425072 SLC10A5Q5PT55 438 aa12.82□□□□□ -0.36
MDC1-205ENST00000425072 TBC1D9BQ66K14 1250 aa12.82□□□□□ -0.36
MDC1-205ENST00000425072 JARID2Q92833 1246 aaPredicted RBP12.82□□□□□ -0.36
MDC1-205ENST00000425072 KAZALD1Q96I82 304 aa12.82□□□□□ -0.36
MDC1-205ENST00000425072 BCL2L12Q9HB09 334 aa12.82□□□□□ -0.36
MDC1-205ENST00000425072 SRP68Q9UHB9 627 aaKnown RBP12.82□□□□□ -0.36
MDC1-205ENST00000425072 TNS1Q9HBL0 1735 aaKnown RBP12.82□□□□□ -0.36
MDC1-205ENST00000425072 SURF6O75683 361 aaKnown RBP12.81□□□□□ -0.36
MDC1-205ENST00000425072 CSF1RP07333 972 aa12.81□□□□□ -0.36
MDC1-205ENST00000425072 GYS1P13807 737 aa12.81□□□□□ -0.36
MDC1-205ENST00000425072 G3BP1Q13283 466 aaKnown RBP eCLIP12.81□□□□□ -0.36
MDC1-205ENST00000425072 RTL5Q5HYW3 569 aaPredicted RBP12.81□□□□□ -0.36
MDC1-205ENST00000425072 LMBR1LQ6UX01 489 aa12.81□□□□□ -0.36
MDC1-205ENST00000425072 BICDL1Q6ZP65 573 aa12.81□□□□□ -0.36
MDC1-205ENST00000425072 SMIM5Q71RC9 77 aa12.81□□□□□ -0.36
MDC1-205ENST00000425072 NBPF5PQ86XG9 351 aaPredicted RBP12.81□□□□□ -0.36
MDC1-205ENST00000425072 COL23A1Q86Y22 540 aaPredicted RBP12.81□□□□□ -0.36
MDC1-205ENST00000425072 UBR3Q6ZT12 1888 aa12.8□□□□□ -0.36
MDC1-205ENST00000425072 ANKRD36CQ5JPF3 1778 aa12.8□□□□□ -0.36
MDC1-205ENST00000425072 PNMA6EA0A0J9YXQ4 647 aa12.8□□□□□ -0.36
MDC1-205ENST00000425072 FAM177BA6PVY3 158 aa12.8□□□□□ -0.36
MDC1-205ENST00000425072 NPHP1O15259 732 aa12.8□□□□□ -0.36
MDC1-205ENST00000425072 TM4SF1P30408 202 aa12.8□□□□□ -0.36
MDC1-205ENST00000425072 ZNF827Q17R98 1081 aa12.8□□□□□ -0.36
MDC1-205ENST00000425072 CCDC57Q2TAC2 916 aa12.8□□□□□ -0.36
MDC1-205ENST00000425072 ANKRD45Q5TZF3 282 aa12.8□□□□□ -0.36
MDC1-205ENST00000425072 ERC1Q8IUD2 1116 aa12.8□□□□□ -0.36
MDC1-205ENST00000425072 NOP58Q9Y2X3 529 aaKnown RBP12.8□□□□□ -0.36
MDC1-205ENST00000425072 UBN2Q6ZU65 1347 aa12.8□□□□□ -0.36
MDC1-205ENST00000425072 NTSR2O95665 410 aa12.79□□□□□ -0.36
MDC1-205ENST00000425072 NUCB1Q02818 461 aa12.79□□□□□ -0.36
MDC1-205ENST00000425072 IFIT5Q13325 482 aaKnown RBP12.79□□□□□ -0.36
MDC1-205ENST00000425072 NFIXQ14938 502 aa12.79□□□□□ -0.36
MDC1-205ENST00000425072 AMIGO3Q86WK7 504 aa12.79□□□□□ -0.36
MDC1-205ENST00000425072 SLC16A10Q8TF71 515 aa12.79□□□□□ -0.36
MDC1-205ENST00000425072 NLRP3Q96P20 1036 aa12.79□□□□□ -0.36
MDC1-205ENST00000425072 COPRSQ9NQ92 184 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms