RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 EFCC1Q9HA90 598 aa10.91□□□□□ -0.66
LINC01040-201ENST00000425048 MAFBQ9Y5Q3 323 aaPredicted RBP10.91□□□□□ -0.66
LINC01040-201ENST00000425048 C20orf204Q6ZNR8 217 aa10.9□□□□□ -0.66
LINC01040-201ENST00000425048 PROSER2Q86WR7 435 aaPredicted RBP10.9□□□□□ -0.66
LINC01040-201ENST00000425048 Q8N3U1 123 aa10.9□□□□□ -0.66
LINC01040-201ENST00000425048 NGLY1Q96IV0 654 aa10.9□□□□□ -0.66
LINC01040-201ENST00000425048 NACC1Q96RE7 527 aa10.9□□□□□ -0.66
LINC01040-201ENST00000425048 HINFPQ9BQA5 517 aa10.9□□□□□ -0.66
LINC01040-201ENST00000425048 FAM229AH3BQW9 127 aa10.88□□□□□ -0.67
LINC01040-201ENST00000425048 LILRB5O75023 590 aa10.88□□□□□ -0.67
LINC01040-201ENST00000425048 NID1P14543 1247 aa10.88□□□□□ -0.67
LINC01040-201ENST00000425048 TRAPPC3LQ5T215 181 aa10.88□□□□□ -0.67
LINC01040-201ENST00000425048 UBE2OQ9C0C9 1292 aaKnown RBP10.87□□□□□ -0.67
LINC01040-201ENST00000425048 IGFLR1Q9H665 355 aa10.87□□□□□ -0.67
LINC01040-201ENST00000425048 TBC1D8BQ0IIM8 1120 aa10.86□□□□□ -0.67
LINC01040-201ENST00000425048 RTN1Q16799 776 aa10.86□□□□□ -0.67
LINC01040-201ENST00000425048 IER5Q5VY09 327 aa10.86□□□□□ -0.67
LINC01040-201ENST00000425048 CALR3Q96L12 384 aaKnown RBP10.86□□□□□ -0.67
LINC01040-201ENST00000425048 ITGB7P26010 798 aa10.85□□□□□ -0.67
LINC01040-201ENST00000425048 PTK7Q13308 1070 aa10.85□□□□□ -0.67
LINC01040-201ENST00000425048 GRIK4Q16099 956 aa10.85□□□□□ -0.67
LINC01040-201ENST00000425048 PPP1R12CQ9BZL4 782 aa10.85□□□□□ -0.67
LINC01040-201ENST00000425048 DPYDQ12882 1025 aa10.84□□□□□ -0.67
LINC01040-201ENST00000425048 KANK4Q5T7N3 995 aaPredicted RBP10.84□□□□□ -0.67
LINC01040-201ENST00000425048 PNMA5Q96PV4 448 aa10.84□□□□□ -0.67
LINC01040-201ENST00000425048 GSX2Q9BZM3 304 aa10.84□□□□□ -0.67
LINC01040-201ENST00000425048 IGFBP4P22692 258 aa10.83□□□□□ -0.68
LINC01040-201ENST00000425048 CCINQ13939 588 aa10.83□□□□□ -0.68
LINC01040-201ENST00000425048 TMEM132AQ24JP5 1023 aa10.83□□□□□ -0.68
LINC01040-201ENST00000425048 RSPO4Q2I0M5 234 aaPredicted RBP10.83□□□□□ -0.68
LINC01040-201ENST00000425048 CRTC2Q53ET0 693 aaPredicted RBP10.83□□□□□ -0.68
LINC01040-201ENST00000425048 VRTNQ9H8Y1 702 aa10.83□□□□□ -0.68
LINC01040-201ENST00000425048 TPSG1Q9NRR2 321 aa10.83□□□□□ -0.68
LINC01040-201ENST00000425048 SLC6A14Q9UN76 642 aa10.83□□□□□ -0.68
LINC01040-201ENST00000425048 C9orf172C9J069 976 aa10.82□□□□□ -0.68
LINC01040-201ENST00000425048 TGFBR3LH3BV60 316 aa10.82□□□□□ -0.68
LINC01040-201ENST00000425048 NKAPLQ5M9Q1 402 aa10.82□□□□□ -0.68
LINC01040-201ENST00000425048 ANKMY2Q8IV38 441 aa10.82□□□□□ -0.68
LINC01040-201ENST00000425048 JPH1Q9HDC5 661 aaPredicted RBP10.82□□□□□ -0.68
LINC01040-201ENST00000425048 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.82□□□□□ -0.68
LINC01040-201ENST00000425048 NUDT8Q8WV74 236 aa10.81□□□□□ -0.68
LINC01040-201ENST00000425048 DNAJB12Q9NXW2 375 aaKnown RBP10.81□□□□□ -0.68
LINC01040-201ENST00000425048 DMGDHQ9UI17 866 aaKnown RBP10.81□□□□□ -0.68
LINC01040-201ENST00000425048 A6NJR5 290 aa10.8□□□□□ -0.68
LINC01040-201ENST00000425048 FAM196BA6NMK8 535 aa10.8□□□□□ -0.68
LINC01040-201ENST00000425048 LGR5O75473 907 aa10.8□□□□□ -0.68
LINC01040-201ENST00000425048 EPB42P16452 691 aa10.8□□□□□ -0.68
LINC01040-201ENST00000425048 LMOD1P29536 600 aaPredicted RBP10.8□□□□□ -0.68
LINC01040-201ENST00000425048 BCS1LQ9Y276 419 aa10.8□□□□□ -0.68
LINC01040-201ENST00000425048 A0A0A0MRY4 1105 aa10.79□□□□□ -0.68
LINC01040-201ENST00000425048 RAC1P63000 192 aa10.79□□□□□ -0.68
LINC01040-201ENST00000425048 ZMYM1Q5SVZ6 1142 aa10.79□□□□□ -0.68
LINC01040-201ENST00000425048 USP17L15C9J2P7 530 aa10.78□□□□□ -0.68
LINC01040-201ENST00000425048 USP17L10C9JJH3 530 aa10.78□□□□□ -0.68
LINC01040-201ENST00000425048 USP17L13C9JLJ4 530 aa10.78□□□□□ -0.68
LINC01040-201ENST00000425048 USP17L12C9JPN9 530 aa10.78□□□□□ -0.68
LINC01040-201ENST00000425048 USP17L11C9JVI0 530 aa10.78□□□□□ -0.68
LINC01040-201ENST00000425048 USP17L21D6R901 530 aa10.78□□□□□ -0.68
LINC01040-201ENST00000425048 USP17L18D6R9N7 530 aa10.78□□□□□ -0.68
LINC01040-201ENST00000425048 USP17L22D6RA61 530 aa10.78□□□□□ -0.68
LINC01040-201ENST00000425048 USP17L17D6RBQ6 530 aa10.78□□□□□ -0.68
LINC01040-201ENST00000425048 USP17L19D6RCP7 530 aa10.78□□□□□ -0.68
LINC01040-201ENST00000425048 USP17L20D6RJB6 530 aa10.78□□□□□ -0.68
LINC01040-201ENST00000425048 RGS9O75916 674 aaPredicted RBP10.78□□□□□ -0.68
LINC01040-201ENST00000425048 ELNP15502 786 aa10.78□□□□□ -0.68
LINC01040-201ENST00000425048 NFKB1P19838 968 aa10.78□□□□□ -0.68
LINC01040-201ENST00000425048 USP17L24Q0WX57 530 aa10.78□□□□□ -0.68
LINC01040-201ENST00000425048 PCSK7Q16549 785 aa10.78□□□□□ -0.68
LINC01040-201ENST00000425048 PSAPL1Q6NUJ1 521 aa10.78□□□□□ -0.68
LINC01040-201ENST00000425048 AFF1P51825 1210 aaKnown RBP10.77□□□□□ -0.69
LINC01040-201ENST00000425048 SELPP16109 830 aa10.76□□□□□ -0.69
LINC01040-201ENST00000425048 INPP5BP32019 993 aa10.76□□□□□ -0.69
LINC01040-201ENST00000425048 NRG1Q02297 640 aaPredicted RBP10.76□□□□□ -0.69
LINC01040-201ENST00000425048 LENG1Q96BZ8 264 aaPredicted RBP10.76□□□□□ -0.69
LINC01040-201ENST00000425048 C11orf16Q9NQ32 467 aa10.76□□□□□ -0.69
LINC01040-201ENST00000425048 KLK14Q9P0G3 267 aa10.76□□□□□ -0.69
LINC01040-201ENST00000425048 DYRK3O43781 588 aa10.75□□□□□ -0.69
LINC01040-201ENST00000425048 IDH3AP50213 366 aa10.75□□□□□ -0.69
LINC01040-201ENST00000425048 ADGRE1Q14246 886 aa10.75□□□□□ -0.69
LINC01040-201ENST00000425048 DMRTC2Q8IXT2 367 aaPredicted RBP10.75□□□□□ -0.69
LINC01040-201ENST00000425048 MAP3K6O95382 1288 aa10.74□□□□□ -0.69
LINC01040-201ENST00000425048 FAM35AQ86V20 835 aa10.74□□□□□ -0.69
LINC01040-201ENST00000425048 VTI1AQ96AJ9 217 aa10.74□□□□□ -0.69
LINC01040-201ENST00000425048 FOXO3O43524 673 aa10.73□□□□□ -0.69
LINC01040-201ENST00000425048 WEE1P30291 646 aa10.73□□□□□ -0.69
LINC01040-201ENST00000425048 DGKZQ13574 1117 aa10.73□□□□□ -0.69
LINC01040-201ENST00000425048 MBTPS1Q14703 1052 aa10.73□□□□□ -0.69
LINC01040-201ENST00000425048 C11orf91Q3C1V1 193 aa10.73□□□□□ -0.69
LINC01040-201ENST00000425048 ARXQ96QS3 562 aa10.73□□□□□ -0.69
LINC01040-201ENST00000425048 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.73□□□□□ -0.69
LINC01040-201ENST00000425048 MICAL2O94851 1124 aa10.72□□□□□ -0.69
LINC01040-201ENST00000425048 ARSDP51689 593 aa10.72□□□□□ -0.69
LINC01040-201ENST00000425048 ILDR2Q71H61 639 aa10.72□□□□□ -0.69
LINC01040-201ENST00000425048 TXNRD3Q86VQ6 643 aa10.72□□□□□ -0.69
LINC01040-201ENST00000425048 NAGPAQ9UK23 515 aa10.72□□□□□ -0.69
LINC01040-201ENST00000425048 CPB1P15086 417 aa10.71□□□□□ -0.69
LINC01040-201ENST00000425048 TARSP26639 723 aaKnown RBP10.71□□□□□ -0.69
LINC01040-201ENST00000425048 GRNP28799 593 aaKnown RBP10.71□□□□□ -0.69
LINC01040-201ENST00000425048 FMR1NBQ8N0W7 255 aaPredicted RBP10.71□□□□□ -0.69
LINC01040-201ENST00000425048 FAM200AQ8TCP9 573 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms