RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 AEBP1Q8IUX7 1158 aa5.66□□□□□ -1.5
SF3B1-205ENST00000424674 ALDH16A1Q8IZ83 802 aa5.66□□□□□ -1.5
SF3B1-205ENST00000424674 SCG3Q8WXD2 468 aaKnown RBP5.66□□□□□ -1.5
SF3B1-205ENST00000424674 CEP63Q96MT8 703 aa5.66□□□□□ -1.5
SF3B1-205ENST00000424674 SPOCK3Q9BQ16 436 aa5.66□□□□□ -1.5
SF3B1-205ENST00000424674 C2orf49Q9BVC5 232 aaPredicted RBP5.66□□□□□ -1.5
SF3B1-205ENST00000424674 SUV39H2Q9H5I1 410 aa5.66□□□□□ -1.5
SF3B1-205ENST00000424674 BRD7Q9NPI1 651 aa5.66□□□□□ -1.5
SF3B1-205ENST00000424674 NOP53Q9NZM5 478 aaKnown RBP5.66□□□□□ -1.5
SF3B1-205ENST00000424674 ELOA3CA0A087WX78 387 aaPredicted RBP5.65□□□□□ -1.5
SF3B1-205ENST00000424674 KRBA1A5PL33 1030 aa5.65□□□□□ -1.5
SF3B1-205ENST00000424674 ELOA3DA6NLF2 546 aaPredicted RBP5.65□□□□□ -1.5
SF3B1-205ENST00000424674 SIN3BO75182 1162 aa5.65□□□□□ -1.5
SF3B1-205ENST00000424674 PROCP04070 461 aa5.65□□□□□ -1.5
SF3B1-205ENST00000424674 LMOD1P29536 600 aaPredicted RBP5.65□□□□□ -1.5
SF3B1-205ENST00000424674 SPEM2Q0P670 501 aa5.65□□□□□ -1.5
SF3B1-205ENST00000424674 ELOA3BQ3SY89 546 aa5.65□□□□□ -1.5
SF3B1-205ENST00000424674 KANK4Q5T7N3 995 aaPredicted RBP5.65□□□□□ -1.5
SF3B1-205ENST00000424674 ANKMY2Q8IV38 441 aa5.65□□□□□ -1.5
SF3B1-205ENST00000424674 ELOA3Q8NG57 546 aa5.65□□□□□ -1.5
SF3B1-205ENST00000424674 CHMP7Q8WUX9 453 aaPredicted RBP5.65□□□□□ -1.5
SF3B1-205ENST00000424674 NGLY1Q96IV0 654 aa5.65□□□□□ -1.5
SF3B1-205ENST00000424674 SUSD3Q96L08 255 aa5.65□□□□□ -1.5
SF3B1-205ENST00000424674 SLC30A3Q99726 388 aa5.65□□□□□ -1.5
SF3B1-205ENST00000424674 HINFPQ9BQA5 517 aa5.65□□□□□ -1.5
SF3B1-205ENST00000424674 ALAS2P22557 587 aa5.64□□□□□ -1.51
SF3B1-205ENST00000424674 RFX1P22670 979 aa5.64□□□□□ -1.51
SF3B1-205ENST00000424674 NEUROD1Q13562 356 aa5.64□□□□□ -1.51
SF3B1-205ENST00000424674 ZNF280CQ8ND82 737 aa5.64□□□□□ -1.51
SF3B1-205ENST00000424674 MDFIQ99750 246 aa5.64□□□□□ -1.51
SF3B1-205ENST00000424674 CHMP4AQ9BY43 222 aa5.64□□□□□ -1.51
SF3B1-205ENST00000424674 VRTNQ9H8Y1 702 aa5.64□□□□□ -1.51
SF3B1-205ENST00000424674 ADARB2-AS1A8MUL3 147 aa5.63□□□□□ -1.51
SF3B1-205ENST00000424674 LGR5O75473 907 aa5.63□□□□□ -1.51
SF3B1-205ENST00000424674 IGFBP4P22692 258 aa5.63□□□□□ -1.51
SF3B1-205ENST00000424674 KCNQ4P56696 695 aa5.63□□□□□ -1.51
SF3B1-205ENST00000424674 RAB44Q7Z6P3 723 aaPredicted RBP5.63□□□□□ -1.51
SF3B1-205ENST00000424674 TNFRSF25Q93038 417 aa5.63□□□□□ -1.51
SF3B1-205ENST00000424674 KCNH4Q9UQ05 1017 aa5.63□□□□□ -1.51
SF3B1-205ENST00000424674 RTN1Q16799 776 aa5.62□□□□□ -1.51
SF3B1-205ENST00000424674 CFAP70Q5T0N1 1121 aa5.62□□□□□ -1.51
SF3B1-205ENST00000424674 IER5Q5VY09 327 aa5.62□□□□□ -1.51
SF3B1-205ENST00000424674 BTLAQ7Z6A9 289 aa5.62□□□□□ -1.51
SF3B1-205ENST00000424674 TRIM11Q96F44 468 aa5.62□□□□□ -1.51
SF3B1-205ENST00000424674 PATL2C9JE40 543 aaKnown RBP5.61□□□□□ -1.51
SF3B1-205ENST00000424674 TGFBR3LH3BV60 316 aa5.61□□□□□ -1.51
SF3B1-205ENST00000424674 ADH7P40394 386 aa5.61□□□□□ -1.51
SF3B1-205ENST00000424674 FOXD4L4Q8WXT5 416 aaPredicted RBP5.61□□□□□ -1.51
SF3B1-205ENST00000424674 LOC100996750A0A140TA64 210 aa5.6□□□□□ -1.51
SF3B1-205ENST00000424674 FOXO3O43524 673 aa5.6□□□□□ -1.51
SF3B1-205ENST00000424674 BHMTQ93088 406 aa5.6□□□□□ -1.51
SF3B1-205ENST00000424674 KRTAP4-6Q9BYQ5 205 aa5.6□□□□□ -1.51
SF3B1-205ENST00000424674 GZF1Q9H116 711 aaPredicted RBP5.6□□□□□ -1.51
SF3B1-205ENST00000424674 SERPINA10Q9UK55 444 aa5.6□□□□□ -1.51
SF3B1-205ENST00000424674 SPDYE3A6NKU9 549 aa5.59□□□□□ -1.51
SF3B1-205ENST00000424674 C1QTNF9BB2RNN3 333 aa5.59□□□□□ -1.51
SF3B1-205ENST00000424674 M0R082 166 aa5.59□□□□□ -1.51
SF3B1-205ENST00000424674 ALBP02768 609 aa5.59□□□□□ -1.51
SF3B1-205ENST00000424674 CHRNA4P43681 627 aa5.59□□□□□ -1.51
SF3B1-205ENST00000424674 ZNF417Q8TAU3 575 aa5.59□□□□□ -1.51
SF3B1-205ENST00000424674 FAM200AQ8TCP9 573 aa5.59□□□□□ -1.51
SF3B1-205ENST00000424674 VTI1AQ96AJ9 217 aa5.59□□□□□ -1.51
SF3B1-205ENST00000424674 CCDC97Q96F63 343 aaPredicted RBP5.59□□□□□ -1.51
SF3B1-205ENST00000424674 ZNF587Q96SQ5 575 aaPredicted RBP5.59□□□□□ -1.51
SF3B1-205ENST00000424674 PLVAPQ9BX97 442 aa5.59□□□□□ -1.51
SF3B1-205ENST00000424674 ADAM23O75077 832 aa5.58□□□□□ -1.52
SF3B1-205ENST00000424674 SPATA31C1P0DKV0 1188 aa5.58□□□□□ -1.52
SF3B1-205ENST00000424674 EPB42P16452 691 aa5.58□□□□□ -1.52
SF3B1-205ENST00000424674 WEE1P30291 646 aa5.58□□□□□ -1.52
SF3B1-205ENST00000424674 BAG6P46379 1132 aa5.58□□□□□ -1.52
SF3B1-205ENST00000424674 TBC1D8BQ0IIM8 1120 aa5.58□□□□□ -1.52
SF3B1-205ENST00000424674 CD163Q86VB7 1156 aa5.58□□□□□ -1.52
SF3B1-205ENST00000424674 UBE2OQ9C0C9 1292 aaKnown RBP5.58□□□□□ -1.52
SF3B1-205ENST00000424674 EFCC1Q9HA90 598 aa5.58□□□□□ -1.52
SF3B1-205ENST00000424674 PRDM6Q9NQX0 595 aa5.58□□□□□ -1.52
SF3B1-205ENST00000424674 NOVA2Q9UNW9 492 aaKnown RBP5.58□□□□□ -1.52
SF3B1-205ENST00000424674 BCS1LQ9Y276 419 aa5.58□□□□□ -1.52
SF3B1-205ENST00000424674 STARD13Q9Y3M8 1113 aa5.58□□□□□ -1.52
SF3B1-205ENST00000424674 IDH3AP50213 366 aa5.57□□□□□ -1.52
SF3B1-205ENST00000424674 PDE4CQ08493 712 aa5.57□□□□□ -1.52
SF3B1-205ENST00000424674 DGKZQ13574 1117 aa5.57□□□□□ -1.52
SF3B1-205ENST00000424674 PRRT3Q5FWE3 981 aa5.57□□□□□ -1.52
SF3B1-205ENST00000424674 MICALL1Q8N3F8 863 aa5.57□□□□□ -1.52
SF3B1-205ENST00000424674 PNMA5Q96PV4 448 aa5.57□□□□□ -1.52
SF3B1-205ENST00000424674 QTRT2Q9H974 415 aaKnown RBP5.57□□□□□ -1.52
SF3B1-205ENST00000424674 KLK14Q9P0G3 267 aa5.57□□□□□ -1.52
SF3B1-205ENST00000424674 USP35Q9P2H5 1018 aa5.57□□□□□ -1.52
SF3B1-205ENST00000424674 DMGDHQ9UI17 866 aaKnown RBP5.57□□□□□ -1.52
SF3B1-205ENST00000424674 K7ELQ4 463 aaPredicted RBP5.56□□□□□ -1.52
SF3B1-205ENST00000424674 NFKB1P19838 968 aa5.56□□□□□ -1.52
SF3B1-205ENST00000424674 CCINQ13939 588 aa5.56□□□□□ -1.52
SF3B1-205ENST00000424674 C8orf86Q6ZUL3 223 aa5.56□□□□□ -1.52
SF3B1-205ENST00000424674 ZNF428Q96B54 188 aa5.56□□□□□ -1.52
SF3B1-205ENST00000424674 MYO19Q96H55 970 aa5.56□□□□□ -1.52
SF3B1-205ENST00000424674 GSX2Q9BZM3 304 aa5.56□□□□□ -1.52
SF3B1-205ENST00000424674 SLC6A14Q9UN76 642 aa5.56□□□□□ -1.52
SF3B1-205ENST00000424674 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.56□□□□□ -1.52
SF3B1-205ENST00000424674 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.55□□□□□ -1.52
SF3B1-205ENST00000424674 NID1P14543 1247 aa5.55□□□□□ -1.52
SF3B1-205ENST00000424674 ARSDP51689 593 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms