RNA–Protein interactions for RNA: ENST00000424458.5

RBM12-204, Transcript of RNA binding motif protein 12, human

TSL 2

Gene RBM12, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM12-204	ENST00000424458	KSR2	Q6VAB6	950 aa		32.41	■■■□□ 2.78
RBM12-204	ENST00000424458	ARFGEF1	Q9Y6D6	1849 aa		32.41	■■■□□ 2.78
RBM12-204	ENST00000424458	CACNA1F	O60840	1977 aa		32.41	■■■□□ 2.78
RBM12-204	ENST00000424458	NPR1	P16066	1061 aa		32.4	■■■□□ 2.78
RBM12-204	ENST00000424458	TRIM28	Q13263	835 aa	Known RBP	32.4	■■■□□ 2.78
RBM12-204	ENST00000424458	TRMT112	Q9UI30	125 aa	Known RBP	32.4	■■■□□ 2.78
RBM12-204	ENST00000424458	GOLGB1	Q14789	3259 aa	Known RBP	32.4	■■■□□ 2.78
RBM12-204	ENST00000424458	RIC1	Q4ADV7	1423 aa		32.4	■■■□□ 2.78
RBM12-204	ENST00000424458	ARFGEF2	Q9Y6D5	1785 aa		32.4	■■■□□ 2.78
RBM12-204	ENST00000424458	ATP5J2-PTCD1	G3V325	749 aa		32.39	■■■□□ 2.78
RBM12-204	ENST00000424458	ARHGAP27	Q6ZUM4	889 aa		32.39	■■■□□ 2.78
RBM12-204	ENST00000424458	ABCC12	Q96J65	1359 aa		32.39	■■■□□ 2.78
RBM12-204	ENST00000424458	SLC10A5	Q5PT55	438 aa		32.38	■■■□□ 2.77
RBM12-204	ENST00000424458	CDCA7L	Q96GN5	454 aa		32.38	■■■□□ 2.77
RBM12-204	ENST00000424458	METTL22	Q9BUU2	404 aa	Predicted RBP	32.38	■■■□□ 2.77
RBM12-204	ENST00000424458	COL11A2	P13942	1736 aa	Predicted RBP	32.37	■■■□□ 2.77
RBM12-204	ENST00000424458	SH3TC1	Q8TE82	1336 aa		32.37	■■■□□ 2.77
RBM12-204	ENST00000424458	PI4KAP2	A4QPH2	592 aa		32.37	■■■□□ 2.77
RBM12-204	ENST00000424458	FLII	Q13045	1269 aa		32.37	■■■□□ 2.77
RBM12-204	ENST00000424458	G2E3	Q7L622	706 aa		32.37	■■■□□ 2.77
RBM12-204	ENST00000424458	PI4KAP1	Q8N8J0	262 aa		32.37	■■■□□ 2.77
RBM12-204	ENST00000424458	MYD88	Q99836	296 aa		32.37	■■■□□ 2.77
RBM12-204	ENST00000424458	MAP3K2	Q9Y2U5	619 aa		32.37	■■■□□ 2.77
RBM12-204	ENST00000424458	NLRP3	Q96P20	1036 aa		32.36	■■■□□ 2.77
RBM12-204	ENST00000424458	TRMT2A	Q8IZ69	625 aa	Known RBP	32.35	■■■□□ 2.77
RBM12-204	ENST00000424458	UTRN	P46939	3433 aa		32.35	■■■□□ 2.77
RBM12-204	ENST00000424458	ALDH1B1	P30837	517 aa		32.34	■■■□□ 2.77
RBM12-204	ENST00000424458	HNRNPU	Q00839	825 aa	Known RBP eCLIP	32.34	■■■□□ 2.77
RBM12-204	ENST00000424458	NEXN	Q0ZGT2	675 aa		32.34	■■■□□ 2.77
RBM12-204	ENST00000424458	FKBP5	Q13451	457 aa	Predicted RBP	32.34	■■■□□ 2.77
RBM12-204	ENST00000424458	CRY2	Q49AN0	593 aa		32.34	■■■□□ 2.77
RBM12-204	ENST00000424458	CCDC191	Q8NCU4	936 aa		32.33	■■■□□ 2.77
RBM12-204	ENST00000424458	RPGR	Q92834	1020 aa	Known RBP	32.33	■■■□□ 2.77
RBM12-204	ENST00000424458	ZNF428	Q96B54	188 aa		32.32	■■■□□ 2.76
RBM12-204	ENST00000424458	ADCY9	O60503	1353 aa		32.32	■■■□□ 2.76
RBM12-204	ENST00000424458	PRPF40B	Q6NWY9	871 aa	Known RBP	32.31	■■■□□ 2.76
RBM12-204	ENST00000424458	TNRC6C	Q9HCJ0	1690 aa	Known RBP	32.31	■■■□□ 2.76
RBM12-204	ENST00000424458	CWC25	Q9NXE8	425 aa	Predicted RBP	32.3	■■■□□ 2.76
RBM12-204	ENST00000424458	FAM89A	Q96GI7	184 aa		32.29	■■■□□ 2.76
RBM12-204	ENST00000424458	RBM17	Q96I25	401 aa	Known RBP	32.29	■■■□□ 2.76
RBM12-204	ENST00000424458	C21orf2	O43822	256 aa		32.28	■■■□□ 2.76
RBM12-204	ENST00000424458	HCLS1	P14317	486 aa	Predicted RBP	32.28	■■■□□ 2.76
RBM12-204	ENST00000424458	HSP90B1	P14625	803 aa	Known RBP	32.28	■■■□□ 2.76
RBM12-204	ENST00000424458	HOXA10	P31260	410 aa	Predicted RBP	32.28	■■■□□ 2.76
RBM12-204	ENST00000424458	SOGA3	Q5TF21	947 aa		32.28	■■■□□ 2.76
RBM12-204	ENST00000424458	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.28	■■■□□ 2.76
RBM12-204	ENST00000424458	CT47B1	P0C2W7	299 aa	Predicted RBP	32.27	■■■□□ 2.76
RBM12-204	ENST00000424458	SYNE4	Q8N205	404 aa		32.27	■■■□□ 2.76
RBM12-204	ENST00000424458	DNAAF4	Q8WXU2	420 aa		32.27	■■■□□ 2.76
RBM12-204	ENST00000424458	ZNF219	Q9P2Y4	722 aa	Predicted RBP	32.26	■■■□□ 2.75
RBM12-204	ENST00000424458	CRAMP1	Q96RY5	1269 aa		32.25	■■■□□ 2.75
RBM12-204	ENST00000424458	SLX4	Q8IY92	1834 aa		32.25	■■■□□ 2.75
RBM12-204	ENST00000424458	PCCA	P05165	728 aa	Predicted RBP	32.24	■■■□□ 2.75
RBM12-204	ENST00000424458	C3orf67	Q6ZVT6	689 aa		32.24	■■■□□ 2.75
RBM12-204	ENST00000424458	CACNA1S	Q13698	1873 aa		32.23	■■■□□ 2.75
RBM12-204	ENST00000424458	IRS4	O14654	1257 aa	Predicted RBP	32.23	■■■□□ 2.75
RBM12-204	ENST00000424458	IGKV5-2	P06315	115 aa		32.23	■■■□□ 2.75
RBM12-204	ENST00000424458	RTL5	Q5HYW3	569 aa	Predicted RBP	32.23	■■■□□ 2.75
RBM12-204	ENST00000424458	ALDH1L2	Q3SY69	923 aa		32.22	■■■□□ 2.75
RBM12-204	ENST00000424458	NEURL1B	A8MQ27	555 aa		32.21	■■■□□ 2.75
RBM12-204	ENST00000424458	MRPL50	Q8N5N7	158 aa	Known RBP	32.21	■■■□□ 2.75
RBM12-204	ENST00000424458	C7orf43	Q8WVR3	580 aa		32.21	■■■□□ 2.75
RBM12-204	ENST00000424458	CWF19L2	Q2TBE0	894 aa	Known RBP	32.2	■■■□□ 2.75
RBM12-204	ENST00000424458	LINS1	Q8NG48	757 aa		32.2	■■■□□ 2.75
RBM12-204	ENST00000424458	SSH1	Q8WYL5	1049 aa		32.2	■■■□□ 2.75
RBM12-204	ENST00000424458	CCDC93	Q567U6	631 aa		32.19	■■■□□ 2.74
RBM12-204	ENST00000424458	DDX46	Q7L014	1031 aa	Known RBP	32.19	■■■□□ 2.74
RBM12-204	ENST00000424458	SF3B3	Q15393	1217 aa	Known RBP	32.18	■■■□□ 2.74
RBM12-204	ENST00000424458	C9orf131	Q5VYM1	1079 aa		32.18	■■■□□ 2.74
RBM12-204	ENST00000424458	CC2D2B	Q6DHV5	1058 aa		32.17	■■■□□ 2.74
RBM12-204	ENST00000424458	ZBED9	Q6R2W3	1325 aa		32.17	■■■□□ 2.74
RBM12-204	ENST00000424458	DDX60	Q8IY21	1712 aa	Known RBP	32.17	■■■□□ 2.74
RBM12-204	ENST00000424458	LAMB2	P55268	1798 aa		32.17	■■■□□ 2.74
RBM12-204	ENST00000424458		F6X3S4	739 aa		32.16	■■■□□ 2.74
RBM12-204	ENST00000424458	NFKBIE	O00221	500 aa		32.16	■■■□□ 2.74
RBM12-204	ENST00000424458	LMNB1	P20700	586 aa		32.16	■■■□□ 2.74
RBM12-204	ENST00000424458	RASSF7	Q02833	373 aa		32.16	■■■□□ 2.74
RBM12-204	ENST00000424458	RTKN2	Q8IZC4	609 aa		32.16	■■■□□ 2.74
RBM12-204	ENST00000424458	TMX4	Q9H1E5	349 aa	Predicted RBP	32.16	■■■□□ 2.74
RBM12-204	ENST00000424458	PTPRC	P08575	1304 aa		32.16	■■■□□ 2.74
RBM12-204	ENST00000424458	CDHR2	Q9BYE9	1310 aa		32.16	■■■□□ 2.74
RBM12-204	ENST00000424458	PDE8A	O60658	829 aa		32.15	■■■□□ 2.74
RBM12-204	ENST00000424458	BBOX1	O75936	387 aa		32.15	■■■□□ 2.74
RBM12-204	ENST00000424458	GCKR	Q14397	625 aa		32.15	■■■□□ 2.74
RBM12-204	ENST00000424458	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.15	■■■□□ 2.74
RBM12-204	ENST00000424458	TAOK3	Q9H2K8	898 aa		32.15	■■■□□ 2.74
RBM12-204	ENST00000424458	SMC4	Q9NTJ3	1288 aa		32.15	■■■□□ 2.74
RBM12-204	ENST00000424458	RNF181	Q9P0P0	153 aa		32.15	■■■□□ 2.74
RBM12-204	ENST00000424458	ABCC4	O15439	1325 aa		32.15	■■■□□ 2.74
RBM12-204	ENST00000424458	LTBP3	Q9NS15	1303 aa		32.15	■■■□□ 2.74
RBM12-204	ENST00000424458	PPEF1	O14829	653 aa	Predicted RBP	32.14	■■■□□ 2.74
RBM12-204	ENST00000424458	GRIPAP1	Q4V328	841 aa		32.14	■■■□□ 2.74
RBM12-204	ENST00000424458		H7C1W4	665 aa		32.13	■■■□□ 2.73
RBM12-204	ENST00000424458	FER1L6	Q2WGJ9	1857 aa		32.13	■■■□□ 2.73
RBM12-204	ENST00000424458	BEND3	Q5T5X7	828 aa		32.13	■■■□□ 2.73
RBM12-204	ENST00000424458	JARID2	Q92833	1246 aa	Predicted RBP	32.13	■■■□□ 2.73
RBM12-204	ENST00000424458	BCL2L13	Q9BXK5	485 aa		32.13	■■■□□ 2.73
RBM12-204	ENST00000424458	SBF1	O95248	1867 aa		32.12	■■■□□ 2.73
RBM12-204	ENST00000424458	GRAP	Q13588	217 aa		32.12	■■■□□ 2.73
RBM12-204	ENST00000424458	GRAPL	Q8TC17	118 aa	Predicted RBP	32.12	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms