RNA–Protein interactions for RNA: ENST00000424235.1

SNHG17-205, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-205ENST00000424235 NUP98P52948 1817 aa20.87■□□□□ 0.93
SNHG17-205ENST00000424235 ZC3H4Q9UPT8 1303 aaKnown RBP20.86■□□□□ 0.93
SNHG17-205ENST00000424235 HOXB7P09629 217 aa20.86■□□□□ 0.93
SNHG17-205ENST00000424235 ZNF34Q8IZ26 560 aa20.86■□□□□ 0.93
SNHG17-205ENST00000424235 ZNF428Q96B54 188 aa20.86■□□□□ 0.93
SNHG17-205ENST00000424235 TMX4Q9H1E5 349 aaPredicted RBP20.86■□□□□ 0.93
SNHG17-205ENST00000424235 IBTKQ9P2D0 1353 aaPredicted RBP20.85■□□□□ 0.93
SNHG17-205ENST00000424235 TCERG1O14776 1098 aaKnown RBP20.85■□□□□ 0.93
SNHG17-205ENST00000424235 DPY19L2Q6NUT2 758 aa20.85■□□□□ 0.93
SNHG17-205ENST00000424235 SLX4Q8IY92 1834 aa20.84■□□□□ 0.93
SNHG17-205ENST00000424235 NTSR2O95665 410 aa20.84■□□□□ 0.93
SNHG17-205ENST00000424235 RBM17Q96I25 401 aaKnown RBP20.84■□□□□ 0.93
SNHG17-205ENST00000424235 NLRP3Q96P20 1036 aa20.84■□□□□ 0.93
SNHG17-205ENST00000424235 TRMT112Q9UI30 125 aaKnown RBP20.84■□□□□ 0.93
SNHG17-205ENST00000424235 SALL2Q9Y467 1007 aaPredicted RBP20.84■□□□□ 0.93
SNHG17-205ENST00000424235 CAPN15O75808 1086 aa20.83■□□□□ 0.93
SNHG17-205ENST00000424235 PRELPP51888 382 aa20.83■□□□□ 0.93
SNHG17-205ENST00000424235 GOLGA2Q08379 1002 aa20.83■□□□□ 0.93
SNHG17-205ENST00000424235 LRP10Q7Z4F1 713 aa20.83■□□□□ 0.93
SNHG17-205ENST00000424235 HYPKQ9NX55 129 aa20.83■□□□□ 0.93
SNHG17-205ENST00000424235 TIAM2Q8IVF5 1701 aa20.83■□□□□ 0.92
SNHG17-205ENST00000424235 KLRG2A4D1S0 409 aaPredicted RBP20.82■□□□□ 0.92
SNHG17-205ENST00000424235 GLTPD2A6NH11 291 aa20.82■□□□□ 0.92
SNHG17-205ENST00000424235 OLFM4Q6UX06 510 aa20.82■□□□□ 0.92
SNHG17-205ENST00000424235 RTKN2Q8IZC4 609 aa20.82■□□□□ 0.92
SNHG17-205ENST00000424235 TCIRG1Q13488 830 aa20.81■□□□□ 0.92
SNHG17-205ENST00000424235 ANKRD13DQ6ZTN6 518 aa20.81■□□□□ 0.92
SNHG17-205ENST00000424235 RIC3Q7Z5B4 369 aa20.81■□□□□ 0.92
SNHG17-205ENST00000424235 ZNF277Q9NRM2 450 aaPredicted RBP20.81■□□□□ 0.92
SNHG17-205ENST00000424235 CCDC88AQ3V6T2 1871 aa20.81■□□□□ 0.92
SNHG17-205ENST00000424235 LTBP3Q9NS15 1303 aa20.8■□□□□ 0.92
SNHG17-205ENST00000424235 PPEF1O14829 653 aaPredicted RBP20.8■□□□□ 0.92
SNHG17-205ENST00000424235 FKBP4Q02790 459 aaKnown RBP eCLIP20.8■□□□□ 0.92
SNHG17-205ENST00000424235 NLRP10Q86W26 655 aa20.8■□□□□ 0.92
SNHG17-205ENST00000424235 SMC1BQ8NDV3 1235 aa20.8■□□□□ 0.92
SNHG17-205ENST00000424235 PLBD2Q8NHP8 589 aa20.8■□□□□ 0.92
SNHG17-205ENST00000424235 TSR2Q969E8 191 aaKnown RBP20.8■□□□□ 0.92
SNHG17-205ENST00000424235 CHMP4AQ9BY43 222 aa20.8■□□□□ 0.92
SNHG17-205ENST00000424235 ARFGEF2Q9Y6D5 1785 aa20.8■□□□□ 0.92
SNHG17-205ENST00000424235 ATP5J2-PTCD1G3V325 749 aa20.79■□□□□ 0.92
SNHG17-205ENST00000424235 ZNF853P0CG23 659 aa20.79■□□□□ 0.92
SNHG17-205ENST00000424235 HCLS1P14317 486 aaPredicted RBP20.79■□□□□ 0.92
SNHG17-205ENST00000424235 CRY2Q49AN0 593 aa20.79■□□□□ 0.92
SNHG17-205ENST00000424235 FAM9BQ8IZU0 186 aa20.79■□□□□ 0.92
SNHG17-205ENST00000424235 SH3TC1Q8TE82 1336 aa20.78■□□□□ 0.92
SNHG17-205ENST00000424235 VEGFAP15692 232 aaPredicted RBP20.78■□□□□ 0.92
SNHG17-205ENST00000424235 RNF123Q5XPI4 1314 aa20.78■□□□□ 0.92
SNHG17-205ENST00000424235 RTL5Q5HYW3 569 aaPredicted RBP20.77■□□□□ 0.92
SNHG17-205ENST00000424235 CCDC30Q5VVM6 783 aa20.77■□□□□ 0.92
SNHG17-205ENST00000424235 C3orf67Q6ZVT6 689 aa20.77■□□□□ 0.92
SNHG17-205ENST00000424235 TNS4Q8IZW8 715 aa20.77■□□□□ 0.92
SNHG17-205ENST00000424235 C8orf58Q8NAV2 365 aa20.77■□□□□ 0.92
SNHG17-205ENST00000424235 STK31Q9BXU1 1019 aa20.77■□□□□ 0.92
SNHG17-205ENST00000424235 FER1L6Q2WGJ9 1857 aa20.77■□□□□ 0.92
SNHG17-205ENST00000424235 RIC1Q4ADV7 1423 aa20.77■□□□□ 0.91
SNHG17-205ENST00000424235 DDX58O95786 925 aaKnown RBP20.76■□□□□ 0.91
SNHG17-205ENST00000424235 WWC1Q8IX03 1113 aa20.76■□□□□ 0.91
SNHG17-205ENST00000424235 SYNE4Q8N205 404 aa20.76■□□□□ 0.91
SNHG17-205ENST00000424235 C7orf43Q8WVR3 580 aa20.76■□□□□ 0.91
SNHG17-205ENST00000424235 ANKRD36CQ5JPF3 1778 aa20.75■□□□□ 0.91
SNHG17-205ENST00000424235 IARSP41252 1262 aaKnown RBP20.75■□□□□ 0.91
SNHG17-205ENST00000424235 CC2D2BQ6DHV5 1058 aa20.75■□□□□ 0.91
SNHG17-205ENST00000424235 DDX46Q7L014 1031 aaKnown RBP20.75■□□□□ 0.91
SNHG17-205ENST00000424235 JDP2Q8WYK2 163 aa20.75■□□□□ 0.91
SNHG17-205ENST00000424235 CRAMP1Q96RY5 1269 aa20.75■□□□□ 0.91
SNHG17-205ENST00000424235 HOXA10P31260 410 aaPredicted RBP20.74■□□□□ 0.91
SNHG17-205ENST00000424235 PHAXQ9H814 394 aaKnown RBP20.74■□□□□ 0.91
SNHG17-205ENST00000424235 DDNO94850 711 aaPredicted RBP20.73■□□□□ 0.91
SNHG17-205ENST00000424235 CCDC27Q2M243 656 aa20.73■□□□□ 0.91
SNHG17-205ENST00000424235 FAM89AQ96GI7 184 aa20.73■□□□□ 0.91
SNHG17-205ENST00000424235 MYD88Q99836 296 aa20.73■□□□□ 0.91
SNHG17-205ENST00000424235 ABCC4O15439 1325 aa20.73■□□□□ 0.91
SNHG17-205ENST00000424235 TWISTNBQ3B726 338 aaPredicted RBP20.72■□□□□ 0.91
SNHG17-205ENST00000424235 SLC10A5Q5PT55 438 aa20.72■□□□□ 0.91
SNHG17-205ENST00000424235 TSPYL6Q8N831 410 aa20.72■□□□□ 0.91
SNHG17-205ENST00000424235 HSPA1AP0DMV8 641 aaKnown RBP20.71■□□□□ 0.91
SNHG17-205ENST00000424235 HSPA1BP0DMV9 641 aaKnown RBP20.71■□□□□ 0.91
SNHG17-205ENST00000424235 GRIPAP1Q4V328 841 aa20.71■□□□□ 0.91
SNHG17-205ENST00000424235 LARGE2Q8N3Y3 721 aa20.71■□□□□ 0.91
SNHG17-205ENST00000424235 EIF6P56537 245 aaKnown RBP20.7■□□□□ 0.9
SNHG17-205ENST00000424235 PSMD1Q99460 953 aa20.7■□□□□ 0.9
SNHG17-205ENST00000424235 IQCA1LA6NCM1 817 aa20.69■□□□□ 0.9
SNHG17-205ENST00000424235 NIM1KQ8IY84 436 aa20.69■□□□□ 0.9
SNHG17-205ENST00000424235 ISCA1Q9BUE6 129 aa20.69■□□□□ 0.9
SNHG17-205ENST00000424235 GJA3Q9Y6H8 435 aa20.69■□□□□ 0.9
SNHG17-205ENST00000424235 IL16Q14005 1332 aa20.69■□□□□ 0.9
SNHG17-205ENST00000424235 ZNF541Q9H0D2 1346 aa20.69■□□□□ 0.9
SNHG17-205ENST00000424235 POTECB2RU33 542 aa20.68■□□□□ 0.9
SNHG17-205ENST00000424235 IRS4O14654 1257 aaPredicted RBP20.68■□□□□ 0.9
SNHG17-205ENST00000424235 PPIP5K2O43314 1243 aa20.68■□□□□ 0.9
SNHG17-205ENST00000424235 HSP90B1P14625 803 aaKnown RBP20.68■□□□□ 0.9
SNHG17-205ENST00000424235 GRAPQ13588 217 aa20.68■□□□□ 0.9
SNHG17-205ENST00000424235 DPP8Q6V1X1 898 aaPredicted RBP20.68■□□□□ 0.9
SNHG17-205ENST00000424235 GRAPLQ8TC17 118 aaPredicted RBP20.68■□□□□ 0.9
SNHG17-205ENST00000424235 ATP6V0A2Q9Y487 856 aa20.68■□□□□ 0.9
SNHG17-205ENST00000424235 DICER1Q9UPY3 1922 aaKnown RBP20.68■□□□□ 0.9
SNHG17-205ENST00000424235 BBOX1O75936 387 aa20.67■□□□□ 0.9
SNHG17-205ENST00000424235 NEXNQ0ZGT2 675 aa20.67■□□□□ 0.9
SNHG17-205ENST00000424235 EAPPQ56P03 285 aaPredicted RBP20.67■□□□□ 0.9
SNHG17-205ENST00000424235 SLC51AQ86UW1 340 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms