RNA–Protein interactions for RNA: ENST00000424043.3

GAPDHP46-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 46, humanhuman

BASIC

Gene GAPDHP46, Length 994 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP46-201ENST00000424043 NBPF4Q96M43 638 aa10.67□□□□□ -0.7
GAPDHP46-201ENST00000424043 KIF24Q5T7B8 1368 aa10.66□□□□□ -0.7
GAPDHP46-201ENST00000424043 CLSPNQ9HAW4 1339 aa10.66□□□□□ -0.7
GAPDHP46-201ENST00000424043 SENP3-EIF4A1A0A087X0R7 540 aa10.66□□□□□ -0.7
GAPDHP46-201ENST00000424043 FBLN1P23142 703 aa10.66□□□□□ -0.7
GAPDHP46-201ENST00000424043 ATP6V1AP38606 617 aa10.66□□□□□ -0.7
GAPDHP46-201ENST00000424043 KCNQ4P56696 695 aa10.66□□□□□ -0.7
GAPDHP46-201ENST00000424043 MPRIPQ6WCQ1 1025 aa10.66□□□□□ -0.7
GAPDHP46-201ENST00000424043 USHBP1Q8N6Y0 703 aa10.66□□□□□ -0.7
GAPDHP46-201ENST00000424043 INSRP06213 1382 aa10.65□□□□□ -0.7
GAPDHP46-201ENST00000424043 FLT4P35916 1363 aa10.65□□□□□ -0.7
GAPDHP46-201ENST00000424043 GIGYF1O75420 1035 aaPredicted RBP10.65□□□□□ -0.7
GAPDHP46-201ENST00000424043 NR1I2O75469 434 aa10.65□□□□□ -0.7
GAPDHP46-201ENST00000424043 C1QTNF8P60827 252 aa10.65□□□□□ -0.7
GAPDHP46-201ENST00000424043 TIMELESSQ9UNS1 1208 aa10.65□□□□□ -0.7
GAPDHP46-201ENST00000424043 SPG7Q9UQ90 795 aa10.65□□□□□ -0.7
GAPDHP46-201ENST00000424043 QSER1Q2KHR3 1735 aa10.64□□□□□ -0.71
GAPDHP46-201ENST00000424043 MEGF6O75095 1541 aa10.64□□□□□ -0.71
GAPDHP46-201ENST00000424043 PPM1GO15355 546 aaPredicted RBP10.64□□□□□ -0.71
GAPDHP46-201ENST00000424043 SSTR3P32745 418 aaPredicted RBP10.64□□□□□ -0.71
GAPDHP46-201ENST00000424043 HSP90AB2PQ58FF8 381 aa10.64□□□□□ -0.71
GAPDHP46-201ENST00000424043 COL23A1Q86Y22 540 aaPredicted RBP10.64□□□□□ -0.71
GAPDHP46-201ENST00000424043 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.64□□□□□ -0.71
GAPDHP46-201ENST00000424043 SLC27A5Q9Y2P5 690 aa10.64□□□□□ -0.71
GAPDHP46-201ENST00000424043 DOT1LQ8TEK3 1739 aa10.64□□□□□ -0.71
GAPDHP46-201ENST00000424043 TTLL12Q14166 644 aaPredicted RBP10.63□□□□□ -0.71
GAPDHP46-201ENST00000424043 CD2APQ9Y5K6 639 aa10.63□□□□□ -0.71
GAPDHP46-201ENST00000424043 PALLDQ8WX93 1383 aa10.63□□□□□ -0.71
GAPDHP46-201ENST00000424043 LY75O60449 1722 aa10.62□□□□□ -0.71
GAPDHP46-201ENST00000424043 NSD3Q9BZ95 1437 aa10.62□□□□□ -0.71
GAPDHP46-201ENST00000424043 KDM4AO75164 1064 aa10.62□□□□□ -0.71
GAPDHP46-201ENST00000424043 RGS20O76081 388 aa10.62□□□□□ -0.71
GAPDHP46-201ENST00000424043 NSD2O96028 1365 aa10.62□□□□□ -0.71
GAPDHP46-201ENST00000424043 MSL1Q68DK7 614 aa10.61□□□□□ -0.71
GAPDHP46-201ENST00000424043 GIGYF2Q6Y7W6 1299 aaKnown RBP10.61□□□□□ -0.71
GAPDHP46-201ENST00000424043 PARP9Q8IXQ6 854 aa10.61□□□□□ -0.71
GAPDHP46-201ENST00000424043 NLGN2Q8NFZ4 835 aa10.61□□□□□ -0.71
GAPDHP46-201ENST00000424043 CCER1Q8TC90 406 aaPredicted RBP10.61□□□□□ -0.71
GAPDHP46-201ENST00000424043 HLA-CQ95604 372 aa10.61□□□□□ -0.71
GAPDHP46-201ENST00000424043 THAP11Q96EK4 314 aa10.61□□□□□ -0.71
GAPDHP46-201ENST00000424043 RGPD2P0DJD1 1756 aa10.61□□□□□ -0.71
GAPDHP46-201ENST00000424043 TMOD3Q9NYL9 352 aa10.6□□□□□ -0.71
GAPDHP46-201ENST00000424043 KIF20BQ96Q89 1820 aa10.59□□□□□ -0.71
GAPDHP46-201ENST00000424043 CYP27B1O15528 508 aa10.59□□□□□ -0.71
GAPDHP46-201ENST00000424043 ADH1BP00325 375 aa10.59□□□□□ -0.71
GAPDHP46-201ENST00000424043 IFNL2Q8IZJ0 200 aa10.59□□□□□ -0.71
GAPDHP46-201ENST00000424043 POLR3GLQ9BT43 218 aa10.59□□□□□ -0.71
GAPDHP46-201ENST00000424043 EMILIN1Q9Y6C2 1016 aa10.59□□□□□ -0.71
GAPDHP46-201ENST00000424043 GOLGB1Q14789 3259 aaKnown RBP10.59□□□□□ -0.71
GAPDHP46-201ENST00000424043 WASHC2AQ641Q2 1341 aa10.58□□□□□ -0.71
GAPDHP46-201ENST00000424043 PPEF1O14829 653 aaPredicted RBP10.58□□□□□ -0.72
GAPDHP46-201ENST00000424043 S1PR4O95977 384 aa10.58□□□□□ -0.72
GAPDHP46-201ENST00000424043 SSFA2P28290 1259 aa10.58□□□□□ -0.72
GAPDHP46-201ENST00000424043 PDE4DQ08499 809 aa10.58□□□□□ -0.72
GAPDHP46-201ENST00000424043 PIGBQ92521 554 aa10.58□□□□□ -0.72
GAPDHP46-201ENST00000424043 SPSB2Q99619 263 aa10.58□□□□□ -0.72
GAPDHP46-201ENST00000424043 GPBP1L1Q9HC44 474 aaPredicted RBP10.58□□□□□ -0.72
GAPDHP46-201ENST00000424043 COL24A1Q17RW2 1714 aa10.58□□□□□ -0.72
GAPDHP46-201ENST00000424043 SHANK3Q9BYB0 1731 aa10.58□□□□□ -0.72
GAPDHP46-201ENST00000424043 C5P01031 1676 aa10.57□□□□□ -0.72
GAPDHP46-201ENST00000424043 LOC102724428A0A0B4J2F2 783 aa10.57□□□□□ -0.72
GAPDHP46-201ENST00000424043 RNF223E7ERA6 249 aa10.57□□□□□ -0.72
GAPDHP46-201ENST00000424043 HSP90AB1P08238 724 aaKnown RBP10.57□□□□□ -0.72
GAPDHP46-201ENST00000424043 MS4A1P11836 297 aa10.57□□□□□ -0.72
GAPDHP46-201ENST00000424043 YBX3P16989 372 aaKnown RBP eCLIP10.57□□□□□ -0.72
GAPDHP46-201ENST00000424043 SIK1P57059 783 aa10.57□□□□□ -0.72
GAPDHP46-201ENST00000424043 BRICD5Q6PL45 260 aa10.57□□□□□ -0.72
GAPDHP46-201ENST00000424043 FAM160A2Q8N612 972 aaPredicted RBP10.57□□□□□ -0.72
GAPDHP46-201ENST00000424043 CARD14Q9BXL6 1004 aa10.57□□□□□ -0.72
GAPDHP46-201ENST00000424043 TUBGCP6Q96RT7 1819 aa10.56□□□□□ -0.72
GAPDHP46-201ENST00000424043 HOXA2O43364 376 aa10.56□□□□□ -0.72
GAPDHP46-201ENST00000424043 GUCA2AQ02747 115 aa10.56□□□□□ -0.72
GAPDHP46-201ENST00000424043 GRIPAP1Q4V328 841 aa10.56□□□□□ -0.72
GAPDHP46-201ENST00000424043 RNF19BQ6ZMZ0 732 aa10.56□□□□□ -0.72
GAPDHP46-201ENST00000424043 USP46P62068 366 aa10.55□□□□□ -0.72
GAPDHP46-201ENST00000424043 SLC6A16Q9GZN6 736 aa10.55□□□□□ -0.72
GAPDHP46-201ENST00000424043 SALL2Q9Y467 1007 aaPredicted RBP10.55□□□□□ -0.72
GAPDHP46-201ENST00000424043 FMNL1O95466 1100 aaPredicted RBP10.54□□□□□ -0.72
GAPDHP46-201ENST00000424043 PHKG2P15735 406 aa10.54□□□□□ -0.72
GAPDHP46-201ENST00000424043 GGCXP38435 758 aa10.54□□□□□ -0.72
GAPDHP46-201ENST00000424043 TNNT2P45379 298 aaPredicted RBP10.54□□□□□ -0.72
GAPDHP46-201ENST00000424043 PLEKHO1Q53GL0 409 aaPredicted RBP10.54□□□□□ -0.72
GAPDHP46-201ENST00000424043 TRAPPC3LQ5T215 181 aa10.54□□□□□ -0.72
GAPDHP46-201ENST00000424043 NUTM1Q86Y26 1132 aa10.54□□□□□ -0.72
GAPDHP46-201ENST00000424043 SPIRE2Q8WWL2 714 aa10.54□□□□□ -0.72
GAPDHP46-201ENST00000424043 EMID1Q96A84 441 aaPredicted RBP10.54□□□□□ -0.72
GAPDHP46-201ENST00000424043 BEGAINQ9BUH8 593 aa10.54□□□□□ -0.72
GAPDHP46-201ENST00000424043 PRKD2Q9BZL6 878 aa10.54□□□□□ -0.72
GAPDHP46-201ENST00000424043 RTCBQ9Y3I0 505 aaKnown RBP10.54□□□□□ -0.72
GAPDHP46-201ENST00000424043 IGSF1Q8N6C5 1336 aa10.54□□□□□ -0.72
GAPDHP46-201ENST00000424043 PLEKHG2Q9H7P9 1386 aa10.53□□□□□ -0.72
GAPDHP46-201ENST00000424043 C4BP0C0L5 1744 aa10.53□□□□□ -0.72
GAPDHP46-201ENST00000424043 ATP10DQ9P241 1426 aa10.53□□□□□ -0.72
GAPDHP46-201ENST00000424043 ERVV-2B6SEH9 535 aa10.53□□□□□ -0.72
GAPDHP46-201ENST00000424043 AMOTQ4VCS5 1084 aa10.53□□□□□ -0.72
GAPDHP46-201ENST00000424043 NLGN1Q8N2Q7 840 aa10.53□□□□□ -0.72
GAPDHP46-201ENST00000424043 POLKQ9UBT6 870 aa10.53□□□□□ -0.72
GAPDHP46-201ENST00000424043 ASAP1Q9ULH1 1129 aa10.53□□□□□ -0.72
GAPDHP46-201ENST00000424043 ITGB4P16144 1822 aa10.53□□□□□ -0.72
GAPDHP46-201ENST00000424043 TAF1LQ8IZX4 1826 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms