RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 UTP14AQ9BVJ6 771 aaKnown RBP23.61■■□□□ 1.37
HDAC6-205ENST00000423941 GOLGB1Q14789 3259 aaKnown RBP23.6■■□□□ 1.37
HDAC6-205ENST00000423941 FAM177BA6PVY3 158 aa23.6■■□□□ 1.37
HDAC6-205ENST00000423941 IGKV5-2P06315 115 aa23.6■■□□□ 1.37
HDAC6-205ENST00000423941 ERFEQ4G0M1 354 aa23.6■■□□□ 1.37
HDAC6-205ENST00000423941 NUTM1Q86Y26 1132 aa23.6■■□□□ 1.37
HDAC6-205ENST00000423941 ABCC12Q96J65 1359 aa23.6■■□□□ 1.37
HDAC6-205ENST00000423941 SRGNP10124 158 aa23.59■■□□□ 1.37
HDAC6-205ENST00000423941 YBX3P16989 372 aaKnown RBP eCLIP23.59■■□□□ 1.37
HDAC6-205ENST00000423941 FKBP5Q13451 457 aaPredicted RBP23.59■■□□□ 1.37
HDAC6-205ENST00000423941 CCDC191Q8NCU4 936 aa23.59■■□□□ 1.37
HDAC6-205ENST00000423941 MYD88Q99836 296 aa23.59■■□□□ 1.37
HDAC6-205ENST00000423941 ARFGEF1Q9Y6D6 1849 aa23.59■■□□□ 1.37
HDAC6-205ENST00000423941 TNRC6CQ9HCJ0 1690 aaKnown RBP23.58■■□□□ 1.37
HDAC6-205ENST00000423941 H0YIN7 160 aa23.58■■□□□ 1.37
HDAC6-205ENST00000423941 RARSP54136 660 aaKnown RBP23.58■■□□□ 1.37
HDAC6-205ENST00000423941 CRY2Q49AN0 593 aa23.58■■□□□ 1.37
HDAC6-205ENST00000423941 C2CD5Q86YS7 1000 aa23.58■■□□□ 1.37
HDAC6-205ENST00000423941 DNAAF4Q8WXU2 420 aa23.58■■□□□ 1.37
HDAC6-205ENST00000423941 PIM2Q9P1W9 311 aa23.58■■□□□ 1.37
HDAC6-205ENST00000423941 NPHP1O15259 732 aa23.57■■□□□ 1.36
HDAC6-205ENST00000423941 SYNE4Q8N205 404 aa23.57■■□□□ 1.36
HDAC6-205ENST00000423941 DDX60Q8IY21 1712 aaKnown RBP23.56■■□□□ 1.36
HDAC6-205ENST00000423941 GTF2E1P29083 439 aaPredicted RBP23.56■■□□□ 1.36
HDAC6-205ENST00000423941 TRMT112Q9UI30 125 aaKnown RBP23.56■■□□□ 1.36
HDAC6-205ENST00000423941 SH3TC1Q8TE82 1336 aa23.56■■□□□ 1.36
HDAC6-205ENST00000423941 LAMB2P55268 1798 aa23.55■■□□□ 1.36
HDAC6-205ENST00000423941 STYK1Q6J9G0 422 aa23.55■■□□□ 1.36
HDAC6-205ENST00000423941 PTPRCP08575 1304 aa23.55■■□□□ 1.36
HDAC6-205ENST00000423941 NEURL1BA8MQ27 555 aa23.54■■□□□ 1.36
HDAC6-205ENST00000423941 NEXNQ0ZGT2 675 aa23.54■■□□□ 1.36
HDAC6-205ENST00000423941 ZBTB38Q8NAP3 1195 aaPredicted RBP23.54■■□□□ 1.36
HDAC6-205ENST00000423941 LINS1Q8NG48 757 aa23.54■■□□□ 1.36
HDAC6-205ENST00000423941 CWC25Q9NXE8 425 aaPredicted RBP23.54■■□□□ 1.36
HDAC6-205ENST00000423941 F6X3S4 739 aa23.53■■□□□ 1.36
HDAC6-205ENST00000423941 PCCAP05165 728 aaPredicted RBP23.53■■□□□ 1.36
HDAC6-205ENST00000423941 GPR162Q16538 588 aa23.53■■□□□ 1.36
HDAC6-205ENST00000423941 BEND3Q5T5X7 828 aa23.53■■□□□ 1.36
HDAC6-205ENST00000423941 FAM89AQ96GI7 184 aa23.53■■□□□ 1.36
HDAC6-205ENST00000423941 MASTLQ96GX5 879 aa23.53■■□□□ 1.36
HDAC6-205ENST00000423941 NPR1P16066 1061 aa23.52■■□□□ 1.36
HDAC6-205ENST00000423941 HOXA10P31260 410 aaPredicted RBP23.52■■□□□ 1.36
HDAC6-205ENST00000423941 CWF19L2Q2TBE0 894 aaKnown RBP23.52■■□□□ 1.36
HDAC6-205ENST00000423941 TTLL6Q8N841 843 aa23.52■■□□□ 1.36
HDAC6-205ENST00000423941 BCL2L13Q9BXK5 485 aa23.52■■□□□ 1.36
HDAC6-205ENST00000423941 SMC4Q9NTJ3 1288 aa23.52■■□□□ 1.36
HDAC6-205ENST00000423941 DCAF8L1A6NGE4 600 aa23.51■■□□□ 1.35
HDAC6-205ENST00000423941 GRIN3BO60391 1043 aa23.51■■□□□ 1.35
HDAC6-205ENST00000423941 DALRD3Q5D0E6 543 aaKnown RBP23.51■■□□□ 1.35
HDAC6-205ENST00000423941 C3orf67Q6ZVT6 689 aa23.51■■□□□ 1.35
HDAC6-205ENST00000423941 NLRP3Q96P20 1036 aa23.51■■□□□ 1.35
HDAC6-205ENST00000423941 SLX4Q8IY92 1834 aa23.51■■□□□ 1.35
HDAC6-205ENST00000423941 H7C1W4 665 aa23.5■■□□□ 1.35
HDAC6-205ENST00000423941 GCKRQ14397 625 aa23.5■■□□□ 1.35
HDAC6-205ENST00000423941 BCS1LQ9Y276 419 aa23.5■■□□□ 1.35
HDAC6-205ENST00000423941 HCLS1P14317 486 aaPredicted RBP23.49■■□□□ 1.35
HDAC6-205ENST00000423941 CNKSR1Q969H4 720 aa23.49■■□□□ 1.35
HDAC6-205ENST00000423941 CDHR2Q9BYE9 1310 aa23.49■■□□□ 1.35
HDAC6-205ENST00000423941 CASP7P55210 303 aa23.48■■□□□ 1.35
HDAC6-205ENST00000423941 SF3B3Q15393 1217 aaKnown RBP23.48■■□□□ 1.35
HDAC6-205ENST00000423941 ARHGAP45Q92619 1136 aa23.48■■□□□ 1.35
HDAC6-205ENST00000423941 ZNF622Q969S3 477 aaKnown RBP eCLIP23.48■■□□□ 1.351e-7■□□□□ 10.9
HDAC6-205ENST00000423941 WWC3Q9ULE0 1092 aa23.48■■□□□ 1.35
HDAC6-205ENST00000423941 CACNA1SQ13698 1873 aa23.47■■□□□ 1.35
HDAC6-205ENST00000423941 CHD4Q14839 1912 aa23.47■■□□□ 1.35
HDAC6-205ENST00000423941 IRS4O14654 1257 aaPredicted RBP23.47■■□□□ 1.35
HDAC6-205ENST00000423941 ALDH1L1O75891 902 aa23.47■■□□□ 1.35
HDAC6-205ENST00000423941 PELP1Q8IZL8 1130 aaKnown RBP23.47■■□□□ 1.35
HDAC6-205ENST00000423941 C7orf43Q8WVR3 580 aa23.47■■□□□ 1.35
HDAC6-205ENST00000423941 CRAMP1Q96RY5 1269 aa23.47■■□□□ 1.35
HDAC6-205ENST00000423941 NOB1Q9ULX3 412 aaKnown RBP23.47■■□□□ 1.35
HDAC6-205ENST00000423941 ALDH1B1P30837 517 aa23.46■■□□□ 1.35
HDAC6-205ENST00000423941 UTRNP46939 3433 aa23.46■■□□□ 1.35
HDAC6-205ENST00000423941 BCAR3O75815 825 aa23.45■■□□□ 1.34
HDAC6-205ENST00000423941 HSP90B1P14625 803 aaKnown RBP23.45■■□□□ 1.34
HDAC6-205ENST00000423941 KIF16BQ96L93 1317 aa23.44■■□□□ 1.34
HDAC6-205ENST00000423941 MYH3P11055 1940 aa23.44■■□□□ 1.34
HDAC6-205ENST00000423941 RTL5Q5HYW3 569 aaPredicted RBP23.44■■□□□ 1.34
HDAC6-205ENST00000423941 PRPF40BQ6NWY9 871 aaKnown RBP23.44■■□□□ 1.34
HDAC6-205ENST00000423941 PLA2G12BQ9BX93 195 aa23.44■■□□□ 1.34
HDAC6-205ENST00000423941 PDE8AO60658 829 aa23.43■■□□□ 1.34
HDAC6-205ENST00000423941 JARID2Q92833 1246 aaPredicted RBP23.43■■□□□ 1.34
HDAC6-205ENST00000423941 SRCIN1Q9C0H9 1055 aa23.43■■□□□ 1.34
HDAC6-205ENST00000423941 FER1L6Q2WGJ9 1857 aa23.43■■□□□ 1.34
HDAC6-205ENST00000423941 UTYO14607 1347 aa23.42■■□□□ 1.34
HDAC6-205ENST00000423941 SLC4A10Q6U841 1118 aa23.42■■□□□ 1.34
HDAC6-205ENST00000423941 RPGRQ92834 1020 aaKnown RBP23.42■■□□□ 1.34
HDAC6-205ENST00000423941 RBM17Q96I25 401 aaKnown RBP23.42■■□□□ 1.34
HDAC6-205ENST00000423941 API5Q9BZZ5 524 aaKnown RBP23.42■■□□□ 1.34
HDAC6-205ENST00000423941 TAF1P21675 1872 aa23.42■■□□□ 1.34
HDAC6-205ENST00000423941 UBE3BQ7Z3V4 1068 aa23.41■■□□□ 1.34
HDAC6-205ENST00000423941 SBF1O95248 1867 aa23.41■■□□□ 1.34
HDAC6-205ENST00000423941 SNED1Q8TER0 1413 aa23.4■■□□□ 1.34
HDAC6-205ENST00000423941 GRM8O00222 908 aa23.39■■□□□ 1.33
HDAC6-205ENST00000423941 IPO8O15397 1037 aaKnown RBP23.39■■□□□ 1.33
HDAC6-205ENST00000423941 ABCC4O15439 1325 aa23.38■■□□□ 1.33
HDAC6-205ENST00000423941 C21orf2O43822 256 aa23.38■■□□□ 1.33
HDAC6-205ENST00000423941 TTLL11Q8NHH1 800 aa23.38■■□□□ 1.33
HDAC6-205ENST00000423941 BBOX1O75936 387 aa23.37■■□□□ 1.33
HDAC6-205ENST00000423941 CSF1RP07333 972 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms