RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 GTF2E1P29083 439 aaPredicted RBP20.1■□□□□ 0.81
SPC24-201ENST00000423327 PARP10Q53GL7 1025 aa20.1■□□□□ 0.81
SPC24-201ENST00000423327 TSPYL6Q8N831 410 aa20.1■□□□□ 0.81
SPC24-201ENST00000423327 TSR2Q969E8 191 aaKnown RBP20.1■□□□□ 0.81
SPC24-201ENST00000423327 DBF4Q9UBU7 674 aaPredicted RBP20.1■□□□□ 0.81
SPC24-201ENST00000423327 NLRP10Q86W26 655 aa20.09■□□□□ 0.81
SPC24-201ENST00000423327 ZC3H4Q9UPT8 1303 aaKnown RBP20.08■□□□□ 0.81
SPC24-201ENST00000423327 TCIRG1Q13488 830 aa20.08■□□□□ 0.81
SPC24-201ENST00000423327 PPP1R42Q7Z4L9 355 aa20.08■□□□□ 0.81
SPC24-201ENST00000423327 SYNE4Q8N205 404 aa20.08■□□□□ 0.81
SPC24-201ENST00000423327 DDX60Q8IY21 1712 aaKnown RBP20.07■□□□□ 0.8
SPC24-201ENST00000423327 PLBD2Q8NHP8 589 aa20.07■□□□□ 0.8
SPC24-201ENST00000423327 UTP14AQ9BVJ6 771 aaKnown RBP20.07■□□□□ 0.8
SPC24-201ENST00000423327 TAOK3Q9H2K8 898 aa20.07■□□□□ 0.8
SPC24-201ENST00000423327 PHAXQ9H814 394 aaKnown RBP20.07■□□□□ 0.8
SPC24-201ENST00000423327 HOXA10P31260 410 aaPredicted RBP20.06■□□□□ 0.8
SPC24-201ENST00000423327 NCBP3Q53F19 620 aaKnown RBP20.06■□□□□ 0.8
SPC24-201ENST00000423327 HSP90AB3PQ58FF7 597 aa20.06■□□□□ 0.8
SPC24-201ENST00000423327 ZNF428Q96B54 188 aa20.06■□□□□ 0.8
SPC24-201ENST00000423327 HYPKQ9NX55 129 aa20.06■□□□□ 0.8
SPC24-201ENST00000423327 CCDC93Q567U6 631 aa20.05■□□□□ 0.8
SPC24-201ENST00000423327 SLC10A5Q5PT55 438 aa20.05■□□□□ 0.8
SPC24-201ENST00000423327 SOGA3Q5TF21 947 aa20.05■□□□□ 0.8
SPC24-201ENST00000423327 ANKRD13DQ6ZTN6 518 aa20.05■□□□□ 0.8
SPC24-201ENST00000423327 ISCA1Q9BUE6 129 aa20.05■□□□□ 0.8
SPC24-201ENST00000423327 IL16Q14005 1332 aa20.04■□□□□ 0.8
SPC24-201ENST00000423327 RNF123Q5XPI4 1314 aa20.04■□□□□ 0.8
SPC24-201ENST00000423327 WDR90Q96KV7 1748 aa20.03■□□□□ 0.8
SPC24-201ENST00000423327 ALDH1B1P30837 517 aa20.03■□□□□ 0.8
SPC24-201ENST00000423327 SALL2Q9Y467 1007 aaPredicted RBP20.03■□□□□ 0.8
SPC24-201ENST00000423327 COL4A1P02462 1669 aa20.03■□□□□ 0.8
SPC24-201ENST00000423327 COL4A5P29400 1685 aa20.03■□□□□ 0.8
SPC24-201ENST00000423327 TAF1P21675 1872 aa20.03■□□□□ 0.8
SPC24-201ENST00000423327 KDM2BQ8NHM5 1336 aa20.02■□□□□ 0.8
SPC24-201ENST00000423327 GLTPD2A6NH11 291 aa20.02■□□□□ 0.8
SPC24-201ENST00000423327 ATP5J2-PTCD1G3V325 749 aa20.02■□□□□ 0.8
SPC24-201ENST00000423327 HCLS1P14317 486 aaPredicted RBP20.02■□□□□ 0.8
SPC24-201ENST00000423327 FKBP4Q02790 459 aaKnown RBP eCLIP20.02■□□□□ 0.8
SPC24-201ENST00000423327 FAM9BQ8IZU0 186 aa20.02■□□□□ 0.8
SPC24-201ENST00000423327 RPGRQ92834 1020 aaKnown RBP20.02■□□□□ 0.8
SPC24-201ENST00000423327 FANCIQ9NVI1 1328 aa20.02■□□□□ 0.79
SPC24-201ENST00000423327 CRAMP1Q96RY5 1269 aa20.01■□□□□ 0.79
SPC24-201ENST00000423327 RRAGCQ9HB90 399 aa20.01■□□□□ 0.79
SPC24-201ENST00000423327 SPINK5Q9NQ38 1064 aaPredicted RBP20.01■□□□□ 0.79
SPC24-201ENST00000423327 TRMT112Q9UI30 125 aaKnown RBP20.01■□□□□ 0.79
SPC24-201ENST00000423327 ABCC4O15439 1325 aa20.01■□□□□ 0.79
SPC24-201ENST00000423327 SH3TC1Q8TE82 1336 aa20.01■□□□□ 0.79
SPC24-201ENST00000423327 NLRP3Q96P20 1036 aa20■□□□□ 0.79
SPC24-201ENST00000423327 ZNF277Q9NRM2 450 aaPredicted RBP20■□□□□ 0.79
SPC24-201ENST00000423327 POTECB2RU33 542 aa19.99■□□□□ 0.79
SPC24-201ENST00000423327 TCERG1O14776 1098 aaKnown RBP19.99■□□□□ 0.79
SPC24-201ENST00000423327 TOMM70O94826 608 aa19.99■□□□□ 0.79
SPC24-201ENST00000423327 CCDC30Q5VVM6 783 aa19.99■□□□□ 0.79
SPC24-201ENST00000423327 RBM17Q96I25 401 aaKnown RBP19.99■□□□□ 0.79
SPC24-201ENST00000423327 CEP350Q5VT06 3117 aa19.99■□□□□ 0.79
SPC24-201ENST00000423327 PPEF1O14829 653 aaPredicted RBP19.98■□□□□ 0.79
SPC24-201ENST00000423327 GOLGA2Q08379 1002 aa19.98■□□□□ 0.79
SPC24-201ENST00000423327 TWISTNBQ3B726 338 aaPredicted RBP19.98■□□□□ 0.79
SPC24-201ENST00000423327 RTKN2Q8IZC4 609 aa19.98■□□□□ 0.79
SPC24-201ENST00000423327 FAM89AQ96GI7 184 aa19.98■□□□□ 0.79
SPC24-201ENST00000423327 TRIM28Q13263 835 aaKnown RBP19.97■□□□□ 0.79
SPC24-201ENST00000423327 RIC3Q7Z5B4 369 aa19.97■□□□□ 0.79
SPC24-201ENST00000423327 WDR63Q8IWG1 891 aa19.97■□□□□ 0.79
SPC24-201ENST00000423327 PSMD1Q99460 953 aa19.97■□□□□ 0.79
SPC24-201ENST00000423327 LRRC37AA6NMS7 1700 aa19.96■□□□□ 0.79
SPC24-201ENST00000423327 HSPA6P17066 643 aa19.96■□□□□ 0.79
SPC24-201ENST00000423327 G2E3Q7L622 706 aa19.96■□□□□ 0.79
SPC24-201ENST00000423327 MYD88Q99836 296 aa19.96■□□□□ 0.79
SPC24-201ENST00000423327 ZNF541Q9H0D2 1346 aa19.96■□□□□ 0.79
SPC24-201ENST00000423327 RTL5Q5HYW3 569 aaPredicted RBP19.95■□□□□ 0.78
SPC24-201ENST00000423327 RBM46Q8TBY0 533 aaKnown RBP19.95■□□□□ 0.78
SPC24-201ENST00000423327 ZNF521Q96K83 1311 aa19.95■□□□□ 0.78
SPC24-201ENST00000423327 DUOX1Q9NRD9 1551 aa19.95■□□□□ 0.78
SPC24-201ENST00000423327 DDNO94850 711 aaPredicted RBP19.94■□□□□ 0.78
SPC24-201ENST00000423327 IARSP41252 1262 aaKnown RBP19.94■□□□□ 0.78
SPC24-201ENST00000423327 CC2D2BQ6DHV5 1058 aa19.94■□□□□ 0.78
SPC24-201ENST00000423327 METTL22Q9BUU2 404 aaPredicted RBP19.93■□□□□ 0.78
SPC24-201ENST00000423327 ATP6V0A2Q9Y487 856 aa19.93■□□□□ 0.78
SPC24-201ENST00000423327 CACNA1FO60840 1977 aa19.92■□□□□ 0.78
SPC24-201ENST00000423327 VAMP4O75379 141 aa19.92■□□□□ 0.78
SPC24-201ENST00000423327 VEGFAP15692 232 aaPredicted RBP19.92■□□□□ 0.78
SPC24-201ENST00000423327 EXOSC9Q06265 439 aaKnown RBP19.92■□□□□ 0.78
SPC24-201ENST00000423327 GRAPQ13588 217 aa19.92■□□□□ 0.78
SPC24-201ENST00000423327 GRAPLQ8TC17 118 aaPredicted RBP19.92■□□□□ 0.78
SPC24-201ENST00000423327 MAP3K2Q9Y2U5 619 aa19.92■□□□□ 0.78
SPC24-201ENST00000423327 LTBP1Q14766 1721 aa19.91■□□□□ 0.78
SPC24-201ENST00000423327 PI4KAP2A4QPH2 592 aa19.91■□□□□ 0.78
SPC24-201ENST00000423327 FZD9O00144 591 aa19.91■□□□□ 0.78
SPC24-201ENST00000423327 IRS4O14654 1257 aaPredicted RBP19.91■□□□□ 0.78
SPC24-201ENST00000423327 IGKV5-2P06315 115 aa19.91■□□□□ 0.78
SPC24-201ENST00000423327 SF3B3Q15393 1217 aaKnown RBP19.91■□□□□ 0.78
SPC24-201ENST00000423327 DPY19L2Q6NUT2 758 aa19.91■□□□□ 0.78
SPC24-201ENST00000423327 KSR2Q6VAB6 950 aa19.91■□□□□ 0.78
SPC24-201ENST00000423327 PI4KAP1Q8N8J0 262 aa19.91■□□□□ 0.78
SPC24-201ENST00000423327 ZBTB38Q8NAP3 1195 aaPredicted RBP19.91■□□□□ 0.78
SPC24-201ENST00000423327 STK31Q9BXU1 1019 aa19.91■□□□□ 0.78
SPC24-201ENST00000423327 SLC4A2P04920 1241 aa19.9■□□□□ 0.78
SPC24-201ENST00000423327 C16orf71Q8IYS4 520 aaPredicted RBP19.9■□□□□ 0.78
SPC24-201ENST00000423327 CCDC191Q8NCU4 936 aa19.9■□□□□ 0.78
SPC24-201ENST00000423327 JARID2Q92833 1246 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms