RNA–Protein interactions for RNA: ENST00000422713.1

TTC38-204, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 5

Gene TTC38, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-204ENST00000422713 DUSP27Q5VZP5 1158 aa17.1■□□□□ 0.33
TTC38-204ENST00000422713 OLFM4Q6UX06 510 aa17.1■□□□□ 0.33
TTC38-204ENST00000422713 PPP1R42Q7Z4L9 355 aa17.1■□□□□ 0.33
TTC38-204ENST00000422713 C7orf43Q8WVR3 580 aa17.1■□□□□ 0.33
TTC38-204ENST00000422713 RPGRQ92834 1020 aaKnown RBP17.1■□□□□ 0.33
TTC38-204ENST00000422713 MRS2Q9HD23 443 aa17.1■□□□□ 0.33
TTC38-204ENST00000422713 GLTPD2A6NH11 291 aa17.09■□□□□ 0.33
TTC38-204ENST00000422713 UTP14AQ9BVJ6 771 aaKnown RBP17.09■□□□□ 0.33
TTC38-204ENST00000422713 RRAGCQ9HB90 399 aa17.09■□□□□ 0.33
TTC38-204ENST00000422713 DBF4Q9UBU7 674 aaPredicted RBP17.09■□□□□ 0.33
TTC38-204ENST00000422713 LAMB2P55268 1798 aa17.08■□□□□ 0.33
TTC38-204ENST00000422713 WDR90Q96KV7 1748 aa17.08■□□□□ 0.32
TTC38-204ENST00000422713 RNF123Q5XPI4 1314 aa17.08■□□□□ 0.32
TTC38-204ENST00000422713 ALDH1B1P30837 517 aa17.08■□□□□ 0.32
TTC38-204ENST00000422713 C3orf67Q6ZVT6 689 aa17.08■□□□□ 0.32
TTC38-204ENST00000422713 RBM46Q8TBY0 533 aaKnown RBP17.08■□□□□ 0.32
TTC38-204ENST00000422713 SNED1Q8TER0 1413 aa17.07■□□□□ 0.32
TTC38-204ENST00000422713 FKBP4Q02790 459 aaKnown RBP eCLIP17.07■□□□□ 0.32
TTC38-204ENST00000422713 NLRP10Q86W26 655 aa17.07■□□□□ 0.32
TTC38-204ENST00000422713 HOXA10P31260 410 aaPredicted RBP17.06■□□□□ 0.32
TTC38-204ENST00000422713 RTKN2Q8IZC4 609 aa17.06■□□□□ 0.32
TTC38-204ENST00000422713 ZNF277Q9NRM2 450 aaPredicted RBP17.06■□□□□ 0.32
TTC38-204ENST00000422713 ELL2O00472 640 aaPredicted RBP17.05■□□□□ 0.32
TTC38-204ENST00000422713 TCIRG1Q13488 830 aa17.05■□□□□ 0.32
TTC38-204ENST00000422713 PLBD2Q8NHP8 589 aa17.05■□□□□ 0.32
TTC38-204ENST00000422713 RBM17Q96I25 401 aaKnown RBP17.05■□□□□ 0.32
TTC38-204ENST00000422713 HYPKQ9NX55 129 aa17.05■□□□□ 0.32
TTC38-204ENST00000422713 SH3TC1Q8TE82 1336 aa17.04■□□□□ 0.32
TTC38-204ENST00000422713 PPEF1O14829 653 aaPredicted RBP17.04■□□□□ 0.32
TTC38-204ENST00000422713 VEGFAP15692 232 aaPredicted RBP17.04■□□□□ 0.32
TTC38-204ENST00000422713 DPY19L2Q6NUT2 758 aa17.04■□□□□ 0.32
TTC38-204ENST00000422713 ZNF428Q96B54 188 aa17.04■□□□□ 0.32
TTC38-204ENST00000422713 NLRP3Q96P20 1036 aa17.04■□□□□ 0.32
TTC38-204ENST00000422713 TRMT112Q9UI30 125 aaKnown RBP17.04■□□□□ 0.32
TTC38-204ENST00000422713 DDX60Q8IY21 1712 aaKnown RBP17.04■□□□□ 0.32
TTC38-204ENST00000422713 ANKRD13DQ6ZTN6 518 aa17.03■□□□□ 0.32
TTC38-204ENST00000422713 SLC51AQ86UW1 340 aa17.03■□□□□ 0.32
TTC38-204ENST00000422713 TSR2Q969E8 191 aaKnown RBP17.03■□□□□ 0.32
TTC38-204ENST00000422713 CRAMP1Q96RY5 1269 aa17.03■□□□□ 0.32
TTC38-204ENST00000422713 ABCC4O15439 1325 aa17.02■□□□□ 0.32
TTC38-204ENST00000422713 HCLS1P14317 486 aaPredicted RBP17.02■□□□□ 0.32
TTC38-204ENST00000422713 IARSP41252 1262 aaKnown RBP17.02■□□□□ 0.32
TTC38-204ENST00000422713 GOLGA2Q08379 1002 aa17.02■□□□□ 0.32
TTC38-204ENST00000422713 FSTL1Q12841 308 aa17.02■□□□□ 0.32
TTC38-204ENST00000422713 CCDC27Q2M243 656 aa17.02■□□□□ 0.32
TTC38-204ENST00000422713 SLC10A5Q5PT55 438 aa17.02■□□□□ 0.32
TTC38-204ENST00000422713 CC2D2BQ6DHV5 1058 aa17.02■□□□□ 0.32
TTC38-204ENST00000422713 C8orf58Q8NAV2 365 aa17.02■□□□□ 0.32
TTC38-204ENST00000422713 ZNF541Q9H0D2 1346 aa17.01■□□□□ 0.31
TTC38-204ENST00000422713 ATP5J2-PTCD1G3V325 749 aa17.01■□□□□ 0.31
TTC38-204ENST00000422713 TCERG1O14776 1098 aaKnown RBP17.01■□□□□ 0.31
TTC38-204ENST00000422713 DDNO94850 711 aaPredicted RBP17.01■□□□□ 0.31
TTC38-204ENST00000422713 APLP1P51693 650 aa17.01■□□□□ 0.31
TTC38-204ENST00000422713 WWC1Q8IX03 1113 aa17.01■□□□□ 0.31
TTC38-204ENST00000422713 SYNE4Q8N205 404 aa17.01■□□□□ 0.31
TTC38-204ENST00000422713 SMC1BQ8NDV3 1235 aa17.01■□□□□ 0.31
TTC38-204ENST00000422713 PSMD1Q99460 953 aa17.01■□□□□ 0.31
TTC38-204ENST00000422713 ISCA1Q9BUE6 129 aa17.01■□□□□ 0.31
TTC38-204ENST00000422713 COL4A5P29400 1685 aa17.01■□□□□ 0.31
TTC38-204ENST00000422713 POTECB2RU33 542 aa16.99■□□□□ 0.31
TTC38-204ENST00000422713 RIC3Q7Z5B4 369 aa16.99■□□□□ 0.31
TTC38-204ENST00000422713 TSPYL6Q8N831 410 aa16.99■□□□□ 0.31
TTC38-204ENST00000422713 PHAXQ9H814 394 aaKnown RBP16.99■□□□□ 0.31
TTC38-204ENST00000422713 GRIPAP1Q4V328 841 aa16.98■□□□□ 0.31
TTC38-204ENST00000422713 CCDC30Q5VVM6 783 aa16.98■□□□□ 0.31
TTC38-204ENST00000422713 LRRC37AA6NMS7 1700 aa16.98■□□□□ 0.31
TTC38-204ENST00000422713 SCN4AP35499 1836 aa16.98■□□□□ 0.31
TTC38-204ENST00000422713 IL16Q14005 1332 aa16.97■□□□□ 0.31
TTC38-204ENST00000422713 DDX46Q7L014 1031 aaKnown RBP16.97■□□□□ 0.31
TTC38-204ENST00000422713 FAM89AQ96GI7 184 aa16.97■□□□□ 0.31
TTC38-204ENST00000422713 CHMP4AQ9BY43 222 aa16.97■□□□□ 0.31
TTC38-204ENST00000422713 TMX4Q9H1E5 349 aaPredicted RBP16.97■□□□□ 0.31
TTC38-204ENST00000422713 ATP6V0A2Q9Y487 856 aa16.97■□□□□ 0.31
TTC38-204ENST00000422713 FANCIQ9NVI1 1328 aa16.96■□□□□ 0.31
TTC38-204ENST00000422713 GRAPQ13588 217 aa16.96■□□□□ 0.31
TTC38-204ENST00000422713 RTL5Q5HYW3 569 aaPredicted RBP16.96■□□□□ 0.31
TTC38-204ENST00000422713 GRAPLQ8TC17 118 aaPredicted RBP16.96■□□□□ 0.31
TTC38-204ENST00000422713 JDP2Q8WYK2 163 aa16.96■□□□□ 0.31
TTC38-204ENST00000422713 L3MBTL3Q96JM7 780 aaPredicted RBP16.96■□□□□ 0.31
TTC38-204ENST00000422713 MYD88Q99836 296 aa16.96■□□□□ 0.31
TTC38-204ENST00000422713 SALL2Q9Y467 1007 aaPredicted RBP16.96■□□□□ 0.31
TTC38-204ENST00000422713 TAF1P21675 1872 aa16.96■□□□□ 0.31
TTC38-204ENST00000422713 IQCA1LA6NCM1 817 aa16.95■□□□□ 0.3
TTC38-204ENST00000422713 DDX58O95786 925 aaKnown RBP16.95■□□□□ 0.3
TTC38-204ENST00000422713 HTRA3P83110 453 aa16.95■□□□□ 0.3
TTC38-204ENST00000422713 TRIM28Q13263 835 aaKnown RBP16.95■□□□□ 0.3
TTC38-204ENST00000422713 TWISTNBQ3B726 338 aaPredicted RBP16.95■□□□□ 0.3
TTC38-204ENST00000422713 NCBP3Q53F19 620 aaKnown RBP16.95■□□□□ 0.3
TTC38-204ENST00000422713 LARGE2Q8N3Y3 721 aa16.95■□□□□ 0.3
TTC38-204ENST00000422713 STK31Q9BXU1 1019 aa16.95■□□□□ 0.3
TTC38-204ENST00000422713 COL4A1P02462 1669 aa16.94■□□□□ 0.3
TTC38-204ENST00000422713 DUOX1Q9NRD9 1551 aa16.94■□□□□ 0.3
TTC38-204ENST00000422713 FZD9O00144 591 aa16.94■□□□□ 0.3
TTC38-204ENST00000422713 PPIP5K2O43314 1243 aa16.94■□□□□ 0.3
TTC38-204ENST00000422713 IRS4O14654 1257 aaPredicted RBP16.93■□□□□ 0.3
TTC38-204ENST00000422713 BBOX1O75936 387 aa16.93■□□□□ 0.3
TTC38-204ENST00000422713 POTEIP0CG38 1075 aa16.93■□□□□ 0.3
TTC38-204ENST00000422713 POTEJP0CG39 1038 aa16.93■□□□□ 0.3
TTC38-204ENST00000422713 DPP8Q6V1X1 898 aaPredicted RBP16.93■□□□□ 0.3
TTC38-204ENST00000422713 FAM9BQ8IZU0 186 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms