RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 DICER1Q9UPY3 1922 aaKnown RBP28.35■■■□□ 2.13
TRAF4-204ENST00000422344 HSP90AB3PQ58FF7 597 aa28.35■■■□□ 2.13
TRAF4-204ENST00000422344 ZNF34Q8IZ26 560 aa28.35■■■□□ 2.13
TRAF4-204ENST00000422344 IBTKQ9P2D0 1353 aaPredicted RBP28.35■■■□□ 2.13
TRAF4-204ENST00000422344 ELL2O00472 640 aaPredicted RBP28.34■■■□□ 2.13
TRAF4-204ENST00000422344 NCBP3Q53F19 620 aaKnown RBP28.34■■■□□ 2.13
TRAF4-204ENST00000422344 PARP10Q53GL7 1025 aa28.34■■■□□ 2.13
TRAF4-204ENST00000422344 NUTM1Q86Y26 1132 aa28.34■■■□□ 2.13
TRAF4-204ENST00000422344 UBN2Q6ZU65 1347 aa28.34■■■□□ 2.13
TRAF4-204ENST00000422344 SUSD4Q5VX71 490 aa28.33■■■□□ 2.13
TRAF4-204ENST00000422344 PPP1R42Q7Z4L9 355 aa28.33■■■□□ 2.13
TRAF4-204ENST00000422344 HYPKQ9NX55 129 aa28.33■■■□□ 2.13
TRAF4-204ENST00000422344 CACNA1SQ13698 1873 aa28.33■■■□□ 2.13
TRAF4-204ENST00000422344 NPR1P16066 1061 aa28.32■■■□□ 2.12
TRAF4-204ENST00000422344 CHMP4AQ9BY43 222 aa28.32■■■□□ 2.12
TRAF4-204ENST00000422344 SLX4Q8IY92 1834 aa28.32■■■□□ 2.12
TRAF4-204ENST00000422344 PRPF40BQ6NWY9 871 aaKnown RBP28.31■■■□□ 2.12
TRAF4-204ENST00000422344 TAOK3Q9H2K8 898 aa28.31■■■□□ 2.12
TRAF4-204ENST00000422344 SALL2Q9Y467 1007 aaPredicted RBP28.31■■■□□ 2.12
TRAF4-204ENST00000422344 ABCC12Q96J65 1359 aa28.3■■■□□ 2.12
TRAF4-204ENST00000422344 LTBP3Q9NS15 1303 aa28.3■■■□□ 2.12
TRAF4-204ENST00000422344 KLRG2A4D1S0 409 aaPredicted RBP28.3■■■□□ 2.12
TRAF4-204ENST00000422344 C8orf58Q8NAV2 365 aa28.3■■■□□ 2.12
TRAF4-204ENST00000422344 TSR2Q969E8 191 aaKnown RBP28.3■■■□□ 2.12
TRAF4-204ENST00000422344 IL16Q14005 1332 aa28.29■■■□□ 2.12
TRAF4-204ENST00000422344 NTSR2O95665 410 aa28.28■■■□□ 2.12
TRAF4-204ENST00000422344 SOGA3Q5TF21 947 aa28.28■■■□□ 2.12
TRAF4-204ENST00000422344 PLBD2Q8NHP8 589 aa28.28■■■□□ 2.12
TRAF4-204ENST00000422344 UTP14AQ9BVJ6 771 aaKnown RBP28.28■■■□□ 2.12
TRAF4-204ENST00000422344 ANKRD36CQ5JPF3 1778 aa28.27■■■□□ 2.12
TRAF4-204ENST00000422344 TCIRG1Q13488 830 aa28.27■■■□□ 2.12
TRAF4-204ENST00000422344 ANKRD13DQ6ZTN6 518 aa28.27■■■□□ 2.12
TRAF4-204ENST00000422344 ARFGEF2Q9Y6D5 1785 aa28.27■■■□□ 2.12
TRAF4-204ENST00000422344 DDNO94850 711 aaPredicted RBP28.26■■■□□ 2.11
TRAF4-204ENST00000422344 CCDC30Q5VVM6 783 aa28.26■■■□□ 2.11
TRAF4-204ENST00000422344 RIC1Q4ADV7 1423 aa28.26■■■□□ 2.11
TRAF4-204ENST00000422344 ALDH1B1P30837 517 aa28.25■■■□□ 2.11
TRAF4-204ENST00000422344 RPGRQ92834 1020 aaKnown RBP28.25■■■□□ 2.11
TRAF4-204ENST00000422344 RNF123Q5XPI4 1314 aa28.24■■■□□ 2.11
TRAF4-204ENST00000422344 HSPA1AP0DMV8 641 aaKnown RBP28.24■■■□□ 2.11
TRAF4-204ENST00000422344 HSPA1BP0DMV9 641 aaKnown RBP28.24■■■□□ 2.11
TRAF4-204ENST00000422344 GOLGA2Q08379 1002 aa28.24■■■□□ 2.11
TRAF4-204ENST00000422344 NLRP10Q86W26 655 aa28.24■■■□□ 2.11
TRAF4-204ENST00000422344 WDR63Q8IWG1 891 aa28.24■■■□□ 2.11
TRAF4-204ENST00000422344 TNS4Q8IZW8 715 aa28.24■■■□□ 2.11
TRAF4-204ENST00000422344 CAPN15O75808 1086 aa28.23■■■□□ 2.11
TRAF4-204ENST00000422344 CRY2Q49AN0 593 aa28.23■■■□□ 2.11
TRAF4-204ENST00000422344 POTEIP0CG38 1075 aa28.22■■■□□ 2.11
TRAF4-204ENST00000422344 POTEJP0CG39 1038 aa28.22■■■□□ 2.11
TRAF4-204ENST00000422344 CHADLQ6NUI6 762 aa28.22■■■□□ 2.11
TRAF4-204ENST00000422344 TSPYL6Q8N831 410 aa28.22■■■□□ 2.11
TRAF4-204ENST00000422344 CCDC93Q567U6 631 aa28.21■■■□□ 2.11
TRAF4-204ENST00000422344 RIC3Q7Z5B4 369 aa28.21■■■□□ 2.11
TRAF4-204ENST00000422344 NLRP3Q96P20 1036 aa28.21■■■□□ 2.11
TRAF4-204ENST00000422344 TRMT112Q9UI30 125 aaKnown RBP28.21■■■□□ 2.11
TRAF4-204ENST00000422344 TWISTNBQ3B726 338 aaPredicted RBP28.2■■■□□ 2.1
TRAF4-204ENST00000422344 C7orf43Q8WVR3 580 aa28.2■■■□□ 2.1
TRAF4-204ENST00000422344 STK31Q9BXU1 1019 aa28.2■■■□□ 2.1
TRAF4-204ENST00000422344 PHAXQ9H814 394 aaKnown RBP28.2■■■□□ 2.1
TRAF4-204ENST00000422344 RBM17Q96I25 401 aaKnown RBP28.19■■■□□ 2.1
TRAF4-204ENST00000422344 SH3TC1Q8TE82 1336 aa28.18■■■□□ 2.1
TRAF4-204ENST00000422344 FANCIQ9NVI1 1328 aa28.18■■■□□ 2.1
TRAF4-204ENST00000422344 DDX58O95786 925 aaKnown RBP28.18■■■□□ 2.1
TRAF4-204ENST00000422344 SLC10A5Q5PT55 438 aa28.18■■■□□ 2.1
TRAF4-204ENST00000422344 ATP5J2-PTCD1G3V325 749 aa28.17■■■□□ 2.1
TRAF4-204ENST00000422344 HOXA10P31260 410 aaPredicted RBP28.17■■■□□ 2.1
TRAF4-204ENST00000422344 CREBZFQ9NS37 354 aa28.17■■■□□ 2.1
TRAF4-204ENST00000422344 ISCA1Q9BUE6 129 aa28.16■■■□□ 2.1
TRAF4-204ENST00000422344 MKRN1Q9UHC7 482 aaKnown RBP28.16■■■□□ 2.1
TRAF4-204ENST00000422344 RTKN2Q8IZC4 609 aa28.15■■■□□ 2.1
TRAF4-204ENST00000422344 CRAMP1Q96RY5 1269 aa28.15■■■□□ 2.1
TRAF4-204ENST00000422344 IQCA1LA6NCM1 817 aa28.14■■■□□ 2.1
TRAF4-204ENST00000422344 HCLS1P14317 486 aaPredicted RBP28.14■■■□□ 2.1
TRAF4-204ENST00000422344 FKBP4Q02790 459 aaKnown RBP eCLIP28.14■■■□□ 2.1
TRAF4-204ENST00000422344 OLFM4Q6UX06 510 aa28.14■■■□□ 2.1
TRAF4-204ENST00000422344 C3orf67Q6ZVT6 689 aa28.14■■■□□ 2.1
TRAF4-204ENST00000422344 ZNF428Q96B54 188 aa28.14■■■□□ 2.1
TRAF4-204ENST00000422344 MYH16Q9H6N6 1097 aa28.14■■■□□ 2.1
TRAF4-204ENST00000422344 ZNF277Q9NRM2 450 aaPredicted RBP28.14■■■□□ 2.1
TRAF4-204ENST00000422344 TCERG1O14776 1098 aaKnown RBP28.13■■■□□ 2.09
TRAF4-204ENST00000422344 L3MBTL3Q96JM7 780 aaPredicted RBP28.12■■■□□ 2.09
TRAF4-204ENST00000422344 MYD88Q99836 296 aa28.12■■■□□ 2.09
TRAF4-204ENST00000422344 TAF1DQ9H5J8 278 aaPredicted RBP28.12■■■□□ 2.09
TRAF4-204ENST00000422344 SCN4AP35499 1836 aa28.12■■■□□ 2.09
TRAF4-204ENST00000422344 TRIM28Q13263 835 aaKnown RBP28.11■■■□□ 2.09
TRAF4-204ENST00000422344 CC2D2BQ6DHV5 1058 aa28.11■■■□□ 2.09
TRAF4-204ENST00000422344 LDHDQ86WU2 507 aa28.11■■■□□ 2.09
TRAF4-204ENST00000422344 SYNE4Q8N205 404 aa28.11■■■□□ 2.09
TRAF4-204ENST00000422344 TMX4Q9H1E5 349 aaPredicted RBP28.11■■■□□ 2.09
TRAF4-204ENST00000422344 PPEF1O14829 653 aaPredicted RBP28.1■■■□□ 2.09
TRAF4-204ENST00000422344 EXOSC9Q06265 439 aaKnown RBP28.1■■■□□ 2.09
TRAF4-204ENST00000422344 FAM89AQ96GI7 184 aa28.1■■■□□ 2.09
TRAF4-204ENST00000422344 ZNF541Q9H0D2 1346 aa28.1■■■□□ 2.09
TRAF4-204ENST00000422344 SLC4A2P04920 1241 aa28.09■■■□□ 2.09
TRAF4-204ENST00000422344 CCER2I3L3R5 266 aa28.08■■■□□ 2.09
TRAF4-204ENST00000422344 EAPPQ56P03 285 aaPredicted RBP28.08■■■□□ 2.09
TRAF4-204ENST00000422344 DDX46Q7L014 1031 aaKnown RBP28.08■■■□□ 2.09
TRAF4-204ENST00000422344 METTL22Q9BUU2 404 aaPredicted RBP28.08■■■□□ 2.09
TRAF4-204ENST00000422344 MAP3K2Q9Y2U5 619 aa28.08■■■□□ 2.09
TRAF4-204ENST00000422344 PASKQ96RG2 1323 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms