RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 TSPYL6Q8N831 410 aa19.19■□□□□ 0.66
LINC01840-201ENST00000421870 TNRC6CQ9HCJ0 1690 aaKnown RBP19.18■□□□□ 0.66
LINC01840-201ENST00000421870 LMNB1P20700 586 aa19.18■□□□□ 0.66
LINC01840-201ENST00000421870 HOXA10P31260 410 aaPredicted RBP19.18■□□□□ 0.66
LINC01840-201ENST00000421870 RASSF7Q02833 373 aa19.18■□□□□ 0.66
LINC01840-201ENST00000421870 TSR2Q969E8 191 aaKnown RBP19.18■□□□□ 0.66
LINC01840-201ENST00000421870 UTP14AQ9BVJ6 771 aaKnown RBP19.18■□□□□ 0.66
LINC01840-201ENST00000421870 RNF181Q9P0P0 153 aa19.18■□□□□ 0.66
LINC01840-201ENST00000421870 RNF123Q5XPI4 1314 aa19.18■□□□□ 0.66
LINC01840-201ENST00000421870 C1QTNF8P60827 252 aa19.17■□□□□ 0.66
LINC01840-201ENST00000421870 SOGA3Q5TF21 947 aa19.17■□□□□ 0.66
LINC01840-201ENST00000421870 CCDC30Q5VVM6 783 aa19.17■□□□□ 0.66
LINC01840-201ENST00000421870 ZNF526Q8TF50 670 aaPredicted RBP19.17■□□□□ 0.66
LINC01840-201ENST00000421870 DICER1Q9UPY3 1922 aaKnown RBP19.17■□□□□ 0.66
LINC01840-201ENST00000421870 TRIM28Q13263 835 aaKnown RBP19.16■□□□□ 0.66
LINC01840-201ENST00000421870 ISCA1Q9BUE6 129 aa19.16■□□□□ 0.66
LINC01840-201ENST00000421870 PHAXQ9H814 394 aaKnown RBP19.16■□□□□ 0.66
LINC01840-201ENST00000421870 ZNF219Q9P2Y4 722 aaPredicted RBP19.16■□□□□ 0.66
LINC01840-201ENST00000421870 SALL2Q9Y467 1007 aaPredicted RBP19.16■□□□□ 0.66
LINC01840-201ENST00000421870 LTBP3Q9NS15 1303 aa19.16■□□□□ 0.66
LINC01840-201ENST00000421870 NLRP3Q96P20 1036 aa19.15■□□□□ 0.66
LINC01840-201ENST00000421870 ZC3H4Q9UPT8 1303 aaKnown RBP19.15■□□□□ 0.66
LINC01840-201ENST00000421870 TWISTNBQ3B726 338 aaPredicted RBP19.14■□□□□ 0.65
LINC01840-201ENST00000421870 CRAMP1Q96RY5 1269 aa19.14■□□□□ 0.65
LINC01840-201ENST00000421870 CACNA1FO60840 1977 aa19.13■□□□□ 0.65
LINC01840-201ENST00000421870 KIF3CO14782 793 aa19.13■□□□□ 0.65
LINC01840-201ENST00000421870 C3orf67Q6ZVT6 689 aa19.13■□□□□ 0.65
LINC01840-201ENST00000421870 TRMT112Q9UI30 125 aaKnown RBP19.13■□□□□ 0.65
LINC01840-201ENST00000421870 SH3TC1Q8TE82 1336 aa19.12■□□□□ 0.65
LINC01840-201ENST00000421870 FANCIQ9NVI1 1328 aa19.12■□□□□ 0.65
LINC01840-201ENST00000421870 RIC3Q7Z5B4 369 aa19.12■□□□□ 0.65
LINC01840-201ENST00000421870 SYNE4Q8N205 404 aa19.12■□□□□ 0.65
LINC01840-201ENST00000421870 RPGRQ92834 1020 aaKnown RBP19.12■□□□□ 0.65
LINC01840-201ENST00000421870 TAOK3Q9H2K8 898 aa19.12■□□□□ 0.65
LINC01840-201ENST00000421870 LAMB2P55268 1798 aa19.11■□□□□ 0.65
LINC01840-201ENST00000421870 GOLGA2Q08379 1002 aa19.11■□□□□ 0.65
LINC01840-201ENST00000421870 CCDC93Q567U6 631 aa19.11■□□□□ 0.65
LINC01840-201ENST00000421870 RTKN2Q8IZC4 609 aa19.11■□□□□ 0.65
LINC01840-201ENST00000421870 RBM17Q96I25 401 aaKnown RBP19.11■□□□□ 0.65
LINC01840-201ENST00000421870 SPINK5Q9NQ38 1064 aaPredicted RBP19.11■□□□□ 0.65
LINC01840-201ENST00000421870 ATP5J2-PTCD1G3V325 749 aa19.1■□□□□ 0.65
LINC01840-201ENST00000421870 VAMP4O75379 141 aa19.1■□□□□ 0.65
LINC01840-201ENST00000421870 CC2D2BQ6DHV5 1058 aa19.1■□□□□ 0.65
LINC01840-201ENST00000421870 KDM2BQ8NHM5 1336 aa19.09■□□□□ 0.65
LINC01840-201ENST00000421870 ZNF521Q96K83 1311 aa19.09■□□□□ 0.65
LINC01840-201ENST00000421870 CCER2I3L3R5 266 aa19.09■□□□□ 0.65
LINC01840-201ENST00000421870 DDX58O95786 925 aaKnown RBP19.09■□□□□ 0.65
LINC01840-201ENST00000421870 HCLS1P14317 486 aaPredicted RBP19.09■□□□□ 0.65
LINC01840-201ENST00000421870 OLFM4Q6UX06 510 aa19.09■□□□□ 0.65
LINC01840-201ENST00000421870 SNED1Q8TER0 1413 aa19.08■□□□□ 0.65
LINC01840-201ENST00000421870 GLTPD2A6NH11 291 aa19.08■□□□□ 0.64
LINC01840-201ENST00000421870 FKBP4Q02790 459 aaKnown RBP eCLIP19.08■□□□□ 0.64
LINC01840-201ENST00000421870 GRIPAP1Q4V328 841 aa19.08■□□□□ 0.64
LINC01840-201ENST00000421870 FAM89AQ96GI7 184 aa19.08■□□□□ 0.64
LINC01840-201ENST00000421870 METTL22Q9BUU2 404 aaPredicted RBP19.08■□□□□ 0.64
LINC01840-201ENST00000421870 STK31Q9BXU1 1019 aa19.08■□□□□ 0.64
LINC01840-201ENST00000421870 NMRK2Q9NPI5 230 aa19.08■□□□□ 0.64
LINC01840-201ENST00000421870 TIAM2Q8IVF5 1701 aa19.08■□□□□ 0.64
LINC01840-201ENST00000421870 DDX60Q8IY21 1712 aaKnown RBP19.08■□□□□ 0.64
LINC01840-201ENST00000421870 SLC4A2P04920 1241 aa19.07■□□□□ 0.64
LINC01840-201ENST00000421870 EXOSC9Q06265 439 aaKnown RBP19.07■□□□□ 0.64
LINC01840-201ENST00000421870 KSR2Q6VAB6 950 aa19.07■□□□□ 0.64
LINC01840-201ENST00000421870 CCDC191Q8NCU4 936 aa19.07■□□□□ 0.64
LINC01840-201ENST00000421870 MYH16Q9H6N6 1097 aa19.07■□□□□ 0.64
LINC01840-201ENST00000421870 TCERG1O14776 1098 aaKnown RBP19.06■□□□□ 0.64
LINC01840-201ENST00000421870 BBOX1O75936 387 aa19.06■□□□□ 0.64
LINC01840-201ENST00000421870 SF3B3Q15393 1217 aaKnown RBP19.06■□□□□ 0.64
LINC01840-201ENST00000421870 PSMD1Q99460 953 aa19.06■□□□□ 0.64
LINC01840-201ENST00000421870 MYD88Q99836 296 aa19.06■□□□□ 0.64
LINC01840-201ENST00000421870 TAF1P21675 1872 aa19.05■□□□□ 0.64
LINC01840-201ENST00000421870 PI4KAP2A4QPH2 592 aa19.05■□□□□ 0.64
LINC01840-201ENST00000421870 TOMM70O94826 608 aa19.05■□□□□ 0.64
LINC01840-201ENST00000421870 G2E3Q7L622 706 aa19.05■□□□□ 0.64
LINC01840-201ENST00000421870 PI4KAP1Q8N8J0 262 aa19.05■□□□□ 0.64
LINC01840-201ENST00000421870 ZBTB38Q8NAP3 1195 aaPredicted RBP19.05■□□□□ 0.64
LINC01840-201ENST00000421870 ZNF428Q96B54 188 aa19.05■□□□□ 0.64
LINC01840-201ENST00000421870 RRAGCQ9HB90 399 aa19.05■□□□□ 0.64
LINC01840-201ENST00000421870 MAP3K2Q9Y2U5 619 aa19.05■□□□□ 0.64
LINC01840-201ENST00000421870 ABCC4O15439 1325 aa19.04■□□□□ 0.64
LINC01840-201ENST00000421870 PPEF1O14829 653 aaPredicted RBP19.04■□□□□ 0.64
LINC01840-201ENST00000421870 DPY19L2Q6NUT2 758 aa19.04■□□□□ 0.64
LINC01840-201ENST00000421870 ATP6V0A2Q9Y487 856 aa19.04■□□□□ 0.64
LINC01840-201ENST00000421870 DDX46Q7L014 1031 aaKnown RBP19.03■□□□□ 0.64
LINC01840-201ENST00000421870 IRS4O14654 1257 aaPredicted RBP19.02■□□□□ 0.64
LINC01840-201ENST00000421870 PCCAP05165 728 aaPredicted RBP19.02■□□□□ 0.64
LINC01840-201ENST00000421870 IGKV5-2P06315 115 aa19.02■□□□□ 0.64
LINC01840-201ENST00000421870 RTL5Q5HYW3 569 aaPredicted RBP19.02■□□□□ 0.64
LINC01840-201ENST00000421870 SP8Q8IXZ3 490 aa19.02■□□□□ 0.64
LINC01840-201ENST00000421870 ZNF277Q9NRM2 450 aaPredicted RBP19.02■□□□□ 0.64
LINC01840-201ENST00000421870 CWC25Q9NXE8 425 aaPredicted RBP19.02■□□□□ 0.64
LINC01840-201ENST00000421870 POTECB2RU33 542 aa19.01■□□□□ 0.63
LINC01840-201ENST00000421870 VEGFAP15692 232 aaPredicted RBP19.01■□□□□ 0.63
LINC01840-201ENST00000421870 IARSP41252 1262 aaKnown RBP19.01■□□□□ 0.63
LINC01840-201ENST00000421870 FLIIQ13045 1269 aa19.01■□□□□ 0.63
LINC01840-201ENST00000421870 GRAPQ13588 217 aa19.01■□□□□ 0.63
LINC01840-201ENST00000421870 GRAPLQ8TC17 118 aaPredicted RBP19.01■□□□□ 0.63
LINC01840-201ENST00000421870 WDR90Q96KV7 1748 aa19■□□□□ 0.63
LINC01840-201ENST00000421870 HSP90B1P14625 803 aaKnown RBP19■□□□□ 0.63
LINC01840-201ENST00000421870 SLC51AQ86UW1 340 aa19■□□□□ 0.63
LINC01840-201ENST00000421870 FZD9O00144 591 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms