RNA–Protein interactions for RNA: ENST00000421671.6

LEMD2-202, Transcript of LEM domain containing 2, humanhuman

TSL 3

Gene LEMD2, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-202ENST00000421671 HSPA4P34932 840 aa26■■□□□ 1.75
LEMD2-202ENST00000421671 KIAA2012Q0VF49 1180 aa26■■□□□ 1.75
LEMD2-202ENST00000421671 NEURL1BA8MQ27 555 aa26■■□□□ 1.75
LEMD2-202ENST00000421671 GLRX3O76003 335 aaKnown RBP26■■□□□ 1.75
LEMD2-202ENST00000421671 MBD3O95983 291 aa26■■□□□ 1.75
LEMD2-202ENST00000421671 ZDHHC9Q9Y397 364 aa26■■□□□ 1.75
LEMD2-202ENST00000421671 SYCE3A1L190 88 aa25.99■■□□□ 1.75
LEMD2-202ENST00000421671 SNRPA1P09661 255 aaKnown RBP25.99■■□□□ 1.75
LEMD2-202ENST00000421671 ERC1Q8IUD2 1116 aa25.99■■□□□ 1.75
LEMD2-202ENST00000421671 SASH1O94885 1247 aa25.99■■□□□ 1.75
LEMD2-202ENST00000421671 PIP4K2AP48426 406 aaPredicted RBP25.99■■□□□ 1.75
LEMD2-202ENST00000421671 PRDM11Q9NQV5 511 aa25.99■■□□□ 1.75
LEMD2-202ENST00000421671 MCM2P49736 904 aa25.98■■□□□ 1.75
LEMD2-202ENST00000421671 METTL22Q9BUU2 404 aaPredicted RBP25.98■■□□□ 1.75
LEMD2-202ENST00000421671 PARP4Q9UKK3 1724 aaKnown RBP25.98■■□□□ 1.75
LEMD2-202ENST00000421671 RAD50Q92878 1312 aa25.98■■□□□ 1.75
LEMD2-202ENST00000421671 TTC5Q8N0Z6 440 aa25.98■■□□□ 1.75
LEMD2-202ENST00000421671 PRIMPOLQ96LW4 560 aa25.98■■□□□ 1.75
LEMD2-202ENST00000421671 MYD88Q99836 296 aa25.98■■□□□ 1.75
LEMD2-202ENST00000421671 LSG1Q9H089 658 aaKnown RBP25.98■■□□□ 1.75
LEMD2-202ENST00000421671 ECHDC1Q9NTX5 307 aa25.98■■□□□ 1.75
LEMD2-202ENST00000421671 GCKRQ14397 625 aa25.97■■□□□ 1.75
LEMD2-202ENST00000421671 CUL4AQ13619 759 aa25.97■■□□□ 1.75
LEMD2-202ENST00000421671 UPF3BQ9BZI7 483 aaKnown RBP25.97■■□□□ 1.75
LEMD2-202ENST00000421671 ZSCAN20P17040 1043 aaPredicted RBP25.96■■□□□ 1.75
LEMD2-202ENST00000421671 NEXNQ0ZGT2 675 aa25.96■■□□□ 1.75
LEMD2-202ENST00000421671 EPHA10Q5JZY3 1008 aa25.96■■□□□ 1.75
LEMD2-202ENST00000421671 FMNL2Q96PY5 1086 aa25.96■■□□□ 1.75
LEMD2-202ENST00000421671 HMGN5P82970 282 aaKnown RBP25.96■■□□□ 1.75
LEMD2-202ENST00000421671 ARID3AQ99856 593 aa25.96■■□□□ 1.75
LEMD2-202ENST00000421671 IFIT2P09913 472 aaKnown RBP25.95■■□□□ 1.74
LEMD2-202ENST00000421671 CABP4P57796 275 aa25.95■■□□□ 1.74
LEMD2-202ENST00000421671 CWC27Q6UX04 472 aaKnown RBP25.95■■□□□ 1.74
LEMD2-202ENST00000421671 ANKRD13DQ6ZTN6 518 aa25.95■■□□□ 1.74
LEMD2-202ENST00000421671 AACSQ86V21 672 aa25.95■■□□□ 1.74
LEMD2-202ENST00000421671 AFDNP55196 1824 aaKnown RBP25.94■■□□□ 1.74
LEMD2-202ENST00000421671 PTMAP06454 111 aaKnown RBP25.94■■□□□ 1.74
LEMD2-202ENST00000421671 EAF2Q96CJ1 260 aaPredicted RBP25.94■■□□□ 1.74
LEMD2-202ENST00000421671 LAMB4A4D0S4 1761 aa25.94■■□□□ 1.74
LEMD2-202ENST00000421671 ARFGEF2Q9Y6D5 1785 aa25.94■■□□□ 1.74
LEMD2-202ENST00000421671 PRDM10Q9NQV6 1147 aa25.94■■□□□ 1.74
LEMD2-202ENST00000421671 GTF2F1P35269 517 aaKnown RBP eCLIP25.93■■□□□ 1.742e-8■□□□□ 8.2
LEMD2-202ENST00000421671 G3BP1Q13283 466 aaKnown RBP eCLIP25.93■■□□□ 1.74
LEMD2-202ENST00000421671 NOL8Q76FK4 1167 aaKnown RBP25.93■■□□□ 1.74
LEMD2-202ENST00000421671 KLHDC4Q8TBB5 520 aa25.93■■□□□ 1.74
LEMD2-202ENST00000421671 SNX14Q9Y5W7 946 aa25.92■■□□□ 1.74
LEMD2-202ENST00000421671 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.92■■□□□ 1.74
LEMD2-202ENST00000421671 ZHX1Q9UKY1 873 aaPredicted RBP25.92■■□□□ 1.74
LEMD2-202ENST00000421671 WDR17Q8IZU2 1322 aa25.92■■□□□ 1.74
LEMD2-202ENST00000421671 GPATCH3Q96I76 525 aa25.91■■□□□ 1.74
LEMD2-202ENST00000421671 GTPBP4Q9BZE4 634 aaKnown RBP25.91■■□□□ 1.74
LEMD2-202ENST00000421671 SIL1Q9H173 461 aa25.91■■□□□ 1.74
LEMD2-202ENST00000421671 DNTTIP2Q5QJE6 756 aaKnown RBP25.91■■□□□ 1.74
LEMD2-202ENST00000421671 RASEFQ8IZ41 740 aa25.91■■□□□ 1.74
LEMD2-202ENST00000421671 JARID2Q92833 1246 aaPredicted RBP25.91■■□□□ 1.74
LEMD2-202ENST00000421671 TSPY26PQ9H489 355 aa25.91■■□□□ 1.74
LEMD2-202ENST00000421671 STRN4Q9NRL3 753 aa25.91■■□□□ 1.74
LEMD2-202ENST00000421671 NSFL1CQ9UNZ2 370 aaKnown RBP25.91■■□□□ 1.74
LEMD2-202ENST00000421671 TOM1L2Q6ZVM7 507 aa25.9■■□□□ 1.74
LEMD2-202ENST00000421671 CCDC8Q9H0W5 538 aaPredicted RBP25.9■■□□□ 1.74
LEMD2-202ENST00000421671 TLR7Q9NYK1 1049 aaKnown RBP25.9■■□□□ 1.74
LEMD2-202ENST00000421671 RNF214Q8ND24 703 aa25.89■■□□□ 1.74
LEMD2-202ENST00000421671 INTS4Q96HW7 963 aaKnown RBP25.89■■□□□ 1.74
LEMD2-202ENST00000421671 DIAPH3Q9NSV4 1193 aa25.89■■□□□ 1.74
LEMD2-202ENST00000421671 SYAP1Q96A49 352 aaPredicted RBP25.88■■□□□ 1.73
LEMD2-202ENST00000421671 COL5A2P05997 1499 aaPredicted RBP25.88■■□□□ 1.73
LEMD2-202ENST00000421671 PIBF1Q8WXW3 757 aa25.88■■□□□ 1.73
LEMD2-202ENST00000421671 EVI5LQ96CN4 794 aa25.88■■□□□ 1.73
LEMD2-202ENST00000421671 CHAMP1Q96JM3 812 aa25.88■■□□□ 1.73
LEMD2-202ENST00000421671 ABCA3Q99758 1704 aa25.88■■□□□ 1.73
LEMD2-202ENST00000421671 UBR2Q8IWV8 1755 aa25.88■■□□□ 1.73
LEMD2-202ENST00000421671 ZCRB1Q8TBF4 217 aaKnown RBP25.87■■□□□ 1.73
LEMD2-202ENST00000421671 PTH1RQ03431 593 aa25.87■■□□□ 1.73
LEMD2-202ENST00000421671 TTC14Q96N46 770 aa25.87■■□□□ 1.73
LEMD2-202ENST00000421671 RFX5P48382 616 aaPredicted RBP25.86■■□□□ 1.73
LEMD2-202ENST00000421671 PCDH11XQ9BZA7 1347 aa25.86■■□□□ 1.73
LEMD2-202ENST00000421671 PCDH11YQ9BZA8 1340 aa25.86■■□□□ 1.73
LEMD2-202ENST00000421671 NBPF26B4DH59 902 aa25.86■■□□□ 1.73
LEMD2-202ENST00000421671 ATP5J2-PTCD1G3V325 749 aa25.86■■□□□ 1.73
LEMD2-202ENST00000421671 PTCD1O75127 700 aaKnown RBP25.86■■□□□ 1.73
LEMD2-202ENST00000421671 UVSSAQ2YD98 709 aa25.86■■□□□ 1.73
LEMD2-202ENST00000421671 NBPF14Q5TI25 921 aa25.86■■□□□ 1.73
LEMD2-202ENST00000421671 NBPF10Q6P3W6 841 aaKnown RBP25.86■■□□□ 1.73
LEMD2-202ENST00000421671 NBPF15Q8N660 670 aa25.86■■□□□ 1.73
LEMD2-202ENST00000421671 SHANK3Q9BYB0 1731 aa25.86■■□□□ 1.73
LEMD2-202ENST00000421671 KIF20AO95235 890 aa25.85■■□□□ 1.73
LEMD2-202ENST00000421671 ZNF710Q8N1W2 664 aa25.85■■□□□ 1.73
LEMD2-202ENST00000421671 RUFY2Q8WXA3 655 aa25.85■■□□□ 1.73
LEMD2-202ENST00000421671 BRD1O95696 1058 aa25.85■■□□□ 1.73
LEMD2-202ENST00000421671 NOLC1Q14978 699 aaKnown RBP eCLIP25.85■■□□□ 1.73
LEMD2-202ENST00000421671 COPRSQ9NQ92 184 aa25.85■■□□□ 1.73
LEMD2-202ENST00000421671 COL15A1P39059 1388 aa25.84■■□□□ 1.73
LEMD2-202ENST00000421671 RABL6Q3YEC7 729 aaPredicted RBP25.84■■□□□ 1.73
LEMD2-202ENST00000421671 UBE3BQ7Z3V4 1068 aa25.84■■□□□ 1.73
LEMD2-202ENST00000421671 FAM184AQ8NB25 1140 aa25.84■■□□□ 1.73
LEMD2-202ENST00000421671 PLBD2Q8NHP8 589 aa25.84■■□□□ 1.73
LEMD2-202ENST00000421671 PHF14O94880 888 aa25.83■■□□□ 1.73
LEMD2-202ENST00000421671 CASP7P55210 303 aa25.83■■□□□ 1.73
LEMD2-202ENST00000421671 FOXD4L5Q5VV16 416 aaPredicted RBP25.83■■□□□ 1.73
LEMD2-202ENST00000421671 FOXD4L4Q8WXT5 416 aaPredicted RBP25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms