RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ATP2B3Q16720 1220 aa12.61□□□□□ -0.39
PTCH1-206ENST00000421141 SLC12A7Q9Y666 1083 aa12.61□□□□□ -0.39
PTCH1-206ENST00000421141 E9PCH4 1651 aa12.61□□□□□ -0.39
PTCH1-206ENST00000421141 PLCG2P16885 1265 aa12.61□□□□□ -0.39
PTCH1-206ENST00000421141 PIP4K2AP48426 406 aaPredicted RBP12.61□□□□□ -0.39
PTCH1-206ENST00000421141 ZSCAN31Q96LW9 406 aaPredicted RBP12.61□□□□□ -0.39
PTCH1-206ENST00000421141 DNAI2Q9GZS0 605 aa12.61□□□□□ -0.39
PTCH1-206ENST00000421141 SLC52A2Q9HAB3 445 aa12.61□□□□□ -0.39
PTCH1-206ENST00000421141 ADGRB3O60242 1522 aa12.61□□□□□ -0.39
PTCH1-206ENST00000421141 BABAM1Q9NWV8 329 aa12.61□□□□□ -0.39
PTCH1-206ENST00000421141 ERVV-2B6SEH9 535 aa12.6□□□□□ -0.39
PTCH1-206ENST00000421141 FAM196AQ6ZSG2 479 aa12.6□□□□□ -0.39
PTCH1-206ENST00000421141 TESK2Q96S53 571 aa12.6□□□□□ -0.39
PTCH1-206ENST00000421141 EIF6P56537 245 aaKnown RBP12.6□□□□□ -0.39
PTCH1-206ENST00000421141 FAM13BQ9NYF5 915 aa12.6□□□□□ -0.39
PTCH1-206ENST00000421141 LETM1O95202 739 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-206ENST00000421141 ATP7BP35670 1465 aa12.6□□□□□ -0.39
PTCH1-206ENST00000421141 CLTCL1P53675 1640 aa12.6□□□□□ -0.39
PTCH1-206ENST00000421141 F8W031 263 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-206ENST00000421141 SMARCA5O60264 1052 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-206ENST00000421141 IL15P40933 162 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-206ENST00000421141 CFAP45Q9UL16 551 aa12.6□□□□□ -0.39
PTCH1-206ENST00000421141 PLEKHG3A1L390 1219 aa12.59□□□□□ -0.39
PTCH1-206ENST00000421141 TSPY2A6NKD2 308 aa12.59□□□□□ -0.39
PTCH1-206ENST00000421141 GOLGA6L1Q8N7Z2 621 aa12.59□□□□□ -0.39
PTCH1-206ENST00000421141 ALDH1B1P30837 517 aa12.59□□□□□ -0.39
PTCH1-206ENST00000421141 CCDC12Q8WUD4 166 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-206ENST00000421141 JARID2Q92833 1246 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-206ENST00000421141 ECHDC1Q9NTX5 307 aa12.59□□□□□ -0.39
PTCH1-206ENST00000421141 WWC3Q9ULE0 1092 aa12.59□□□□□ -0.39
PTCH1-206ENST00000421141 NAP1L1P55209 391 aaKnown RBP12.59□□□□□ -0.39
PTCH1-206ENST00000421141 CEBPZQ03701 1054 aaKnown RBP12.59□□□□□ -0.39
PTCH1-206ENST00000421141 MFSD6Q6ZSS7 791 aa12.59□□□□□ -0.39
PTCH1-206ENST00000421141 VEZTQ9HBM0 779 aa12.59□□□□□ -0.39
PTCH1-206ENST00000421141 LARP1BQ659C4 914 aaKnown RBP12.59□□□□□ -0.39
PTCH1-206ENST00000421141 ARHGAP45Q92619 1136 aa12.59□□□□□ -0.39
PTCH1-206ENST00000421141 CHMP4BP1P59074 171 aa12.59□□□□□ -0.39
PTCH1-206ENST00000421141 ZFYP08048 801 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-206ENST00000421141 PARD3Q8TEW0 1356 aa12.59□□□□□ -0.39
PTCH1-206ENST00000421141 SCLT1Q96NL6 688 aa12.58□□□□□ -0.39
PTCH1-206ENST00000421141 RSPH6AQ9H0K4 717 aa12.58□□□□□ -0.39
PTCH1-206ENST00000421141 ANKARQ7Z5J8 1434 aa12.58□□□□□ -0.4
PTCH1-206ENST00000421141 CCDC178Q5BJE1 867 aa12.58□□□□□ -0.4
PTCH1-206ENST00000421141 SUPT20HQ8NEM7 779 aa12.58□□□□□ -0.4
PTCH1-206ENST00000421141 RAB34Q9BZG1 259 aa12.58□□□□□ -0.4
PTCH1-206ENST00000421141 ZFYVE27Q5T4F4 411 aa12.58□□□□□ -0.4
PTCH1-206ENST00000421141 KAT14Q9H8E8 782 aa12.58□□□□□ -0.4
PTCH1-206ENST00000421141 GJA3Q9Y6H8 435 aa12.58□□□□□ -0.4
PTCH1-206ENST00000421141 PDE6BP35913 854 aa12.58□□□□□ -0.4
PTCH1-206ENST00000421141 ME1P48163 572 aa12.58□□□□□ -0.4
PTCH1-206ENST00000421141 NAA16Q6N069 864 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-206ENST00000421141 IFIT3O14879 490 aaKnown RBP12.58□□□□□ -0.4
PTCH1-206ENST00000421141 FILIP1LQ4L180 1135 aa12.58□□□□□ -0.4
PTCH1-206ENST00000421141 GLI2P10070 1586 aa12.58□□□□□ -0.4
PTCH1-206ENST00000421141 TSPY3P0CV98 308 aa12.57□□□□□ -0.4
PTCH1-206ENST00000421141 TSPY8P0CW00 308 aa12.57□□□□□ -0.4
PTCH1-206ENST00000421141 TRAF1Q13077 416 aa12.57□□□□□ -0.4
PTCH1-206ENST00000421141 LINS1Q8NG48 757 aa12.57□□□□□ -0.4
PTCH1-206ENST00000421141 WDR33Q9C0J8 1336 aaKnown RBP12.57□□□□□ -0.4
PTCH1-206ENST00000421141 CARD14Q9BXL6 1004 aa12.57□□□□□ -0.4
PTCH1-206ENST00000421141 ZNF335Q9H4Z2 1342 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-206ENST00000421141 DACH1Q9UI36 760 aa12.57□□□□□ -0.4
PTCH1-206ENST00000421141 GPR162Q16538 588 aa12.57□□□□□ -0.4
PTCH1-206ENST00000421141 RIMBP2O15034 1052 aa12.56□□□□□ -0.4
PTCH1-206ENST00000421141 LMBR1LQ6UX01 489 aa12.56□□□□□ -0.4
PTCH1-206ENST00000421141 SSBP05455 408 aaKnown RBP eCLIP12.56□□□□□ -0.4
PTCH1-206ENST00000421141 CYP7A1P22680 504 aa12.56□□□□□ -0.4
PTCH1-206ENST00000421141 RDXP35241 583 aaKnown RBP12.56□□□□□ -0.4
PTCH1-206ENST00000421141 FAM135BQ49AJ0 1406 aa12.56□□□□□ -0.4
PTCH1-206ENST00000421141 RBM26Q5T8P6 1007 aaKnown RBP12.56□□□□□ -0.4
PTCH1-206ENST00000421141 TMEM87AQ8NBN3 555 aa12.56□□□□□ -0.4
PTCH1-206ENST00000421141 PLBD2Q8NHP8 589 aa12.56□□□□□ -0.4
PTCH1-206ENST00000421141 METP08581 1390 aa12.56□□□□□ -0.4
PTCH1-206ENST00000421141 LDHBP07195 334 aaKnown RBP12.56□□□□□ -0.4
PTCH1-206ENST00000421141 KRT85P78386 507 aa12.55□□□□□ -0.4
PTCH1-206ENST00000421141 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.55□□□□□ -0.46e-10■■■■■ 141.3
PTCH1-206ENST00000421141 KIAA0232Q92628 1395 aa12.55□□□□□ -0.4
PTCH1-206ENST00000421141 SSRP1Q08945 709 aaKnown RBP12.55□□□□□ -0.4
PTCH1-206ENST00000421141 CEP57L1Q8IYX8 460 aa12.55□□□□□ -0.4
PTCH1-206ENST00000421141 PICALMQ13492 652 aa12.55□□□□□ -0.4
PTCH1-206ENST00000421141 SLC4A8Q2Y0W8 1093 aa12.55□□□□□ -0.4
PTCH1-206ENST00000421141 DDX21Q9NR30 783 aaKnown RBP eCLIP12.55□□□□□ -0.4
PTCH1-206ENST00000421141 MAP2P11137 1827 aaKnown RBP12.55□□□□□ -0.4
PTCH1-206ENST00000421141 CARD10Q9BWT7 1032 aa12.55□□□□□ -0.4
PTCH1-206ENST00000421141 TMEM266Q2M3C6 531 aa12.55□□□□□ -0.4
PTCH1-206ENST00000421141 KRT27Q7Z3Y8 459 aa12.55□□□□□ -0.4
PTCH1-206ENST00000421141 SNRKQ9NRH2 765 aa12.55□□□□□ -0.4
PTCH1-206ENST00000421141 B4DLN1 442 aa12.54□□□□□ -0.4
PTCH1-206ENST00000421141 MRPL12P52815 198 aaKnown RBP12.54□□□□□ -0.4
PTCH1-206ENST00000421141 PAF1Q8N7H5 531 aa12.54□□□□□ -0.4
PTCH1-206ENST00000421141 CCDC191Q8NCU4 936 aa12.54□□□□□ -0.4
PTCH1-206ENST00000421141 GNAT2P19087 354 aa12.54□□□□□ -0.4
PTCH1-206ENST00000421141 HOOK2Q96ED9 719 aa12.54□□□□□ -0.4
PTCH1-206ENST00000421141 BEGAINQ9BUH8 593 aa12.54□□□□□ -0.4
PTCH1-206ENST00000421141 DIP2BQ9P265 1576 aa12.54□□□□□ -0.4
PTCH1-206ENST00000421141 GGA1Q9UJY5 639 aa12.54□□□□□ -0.4
PTCH1-206ENST00000421141 SH3TC1Q8TE82 1336 aa12.54□□□□□ -0.4
PTCH1-206ENST00000421141 PREX1Q8TCU6 1659 aa12.54□□□□□ -0.4
PTCH1-206ENST00000421141 TMEM67Q5HYA8 995 aa12.54□□□□□ -0.4
PTCH1-206ENST00000421141 KRT23Q9C075 422 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms