RNA–Protein interactions for RNA: ENST00000421069.5

VPS8-202, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-202ENST00000421069 TTC16Q8NEE8 873 aa7.91□□□□□ -1.14
VPS8-202ENST00000421069 NUDT16Q96DE0 195 aaKnown RBP7.91□□□□□ -1.14
VPS8-202ENST00000421069 BCL2L13Q9BXK5 485 aa7.91□□□□□ -1.14
VPS8-202ENST00000421069 GMPR2Q9P2T1 348 aaKnown RBP7.91□□□□□ -1.14
VPS8-202ENST00000421069 PLCB3Q01970 1234 aa7.9□□□□□ -1.14
VPS8-202ENST00000421069 FMR1Q06787 632 aaKnown RBP eCLIP7.9□□□□□ -1.14
VPS8-202ENST00000421069 RIPOR1Q6ZS17 1223 aa7.9□□□□□ -1.14
VPS8-202ENST00000421069 CCDC155Q8N6L0 562 aa7.9□□□□□ -1.14
VPS8-202ENST00000421069 CEP63Q96MT8 703 aa7.9□□□□□ -1.14
VPS8-202ENST00000421069 ZCCHC2Q9C0B9 1178 aaKnown RBP7.9□□□□□ -1.14
VPS8-202ENST00000421069 FNDC3AQ9Y2H6 1198 aaKnown RBP7.9□□□□□ -1.14
VPS8-202ENST00000421069 RTCBQ9Y3I0 505 aaKnown RBP7.9□□□□□ -1.14
VPS8-202ENST00000421069 FAM157BP0CG42 384 aa7.89□□□□□ -1.15
VPS8-202ENST00000421069 KCNQ4P56696 695 aa7.89□□□□□ -1.15
VPS8-202ENST00000421069 EAPPQ56P03 285 aaPredicted RBP7.89□□□□□ -1.15
VPS8-202ENST00000421069 XKR5Q6UX68 686 aa7.89□□□□□ -1.15
VPS8-202ENST00000421069 FBXO33Q7Z6M2 555 aa7.89□□□□□ -1.15
VPS8-202ENST00000421069 TRIM22Q8IYM9 498 aa7.89□□□□□ -1.15
VPS8-202ENST00000421069 NUCKS1Q9H1E3 243 aaKnown RBP7.89□□□□□ -1.15
VPS8-202ENST00000421069 PCDHGC4Q9Y5F7 938 aa7.89□□□□□ -1.15
VPS8-202ENST00000421069 GPR182O15218 404 aa7.88□□□□□ -1.15
VPS8-202ENST00000421069 ATXN7O15265 892 aaPredicted RBP7.88□□□□□ -1.15
VPS8-202ENST00000421069 NEFLP07196 543 aa7.88□□□□□ -1.15
VPS8-202ENST00000421069 THBS1P07996 1170 aa7.88□□□□□ -1.15
VPS8-202ENST00000421069 LAMC2Q13753 1193 aa7.88□□□□□ -1.15
VPS8-202ENST00000421069 ZNF326Q5BKZ1 582 aaKnown RBP7.88□□□□□ -1.15
VPS8-202ENST00000421069 GGNBP2Q9H3C7 697 aa7.88□□□□□ -1.15
VPS8-202ENST00000421069 BRD7Q9NPI1 651 aa7.88□□□□□ -1.15
VPS8-202ENST00000421069 KCNMB2Q9Y691 235 aa7.88□□□□□ -1.15
VPS8-202ENST00000421069 EFSO43281 561 aa7.87□□□□□ -1.15
VPS8-202ENST00000421069 EGFRP00533 1210 aa7.87□□□□□ -1.15
VPS8-202ENST00000421069 ZNF16P17020 682 aaPredicted RBP7.87□□□□□ -1.15
VPS8-202ENST00000421069 RBM25P49756 843 aaKnown RBP7.87□□□□□ -1.15
VPS8-202ENST00000421069 FGD1P98174 961 aa7.87□□□□□ -1.15
VPS8-202ENST00000421069 UBAP2LQ14157 1087 aaKnown RBP7.87□□□□□ -1.15
VPS8-202ENST00000421069 C8orf34Q49A92 452 aa7.87□□□□□ -1.15
VPS8-202ENST00000421069 PDE12Q6L8Q7 609 aaKnown RBP7.87□□□□□ -1.15
VPS8-202ENST00000421069 Q6ZNB5 142 aa7.87□□□□□ -1.15
VPS8-202ENST00000421069 CMTR1Q8N1G2 835 aaKnown RBP7.87□□□□□ -1.15
VPS8-202ENST00000421069 GIPC2Q8TF65 315 aa7.87□□□□□ -1.15
VPS8-202ENST00000421069 P4HBP07237 508 aaKnown RBP7.86□□□□□ -1.15
VPS8-202ENST00000421069 SNRPBP14678 240 aaKnown RBP7.86□□□□□ -1.15
VPS8-202ENST00000421069 ITGA6P23229 1130 aa7.86□□□□□ -1.15
VPS8-202ENST00000421069 GRNP28799 593 aaKnown RBP7.86□□□□□ -1.15
VPS8-202ENST00000421069 DBN1Q16643 649 aa7.86□□□□□ -1.15
VPS8-202ENST00000421069 ZNF428Q96B54 188 aa7.86□□□□□ -1.15
VPS8-202ENST00000421069 NIF3L1Q9GZT8 377 aa7.86□□□□□ -1.15
VPS8-202ENST00000421069 CUEDC1Q9NWM3 386 aaPredicted RBP7.86□□□□□ -1.15
VPS8-202ENST00000421069 KCNH4Q9UQ05 1017 aa7.86□□□□□ -1.15
VPS8-202ENST00000421069 C11orf95C9JLR9 678 aaPredicted RBP7.85□□□□□ -1.15
VPS8-202ENST00000421069 UBAP1LF5GYI3 381 aa7.85□□□□□ -1.15
VPS8-202ENST00000421069 TNP2Q05952 138 aa7.85□□□□□ -1.15
VPS8-202ENST00000421069 TRIP4Q15650 581 aaPredicted RBP7.85□□□□□ -1.15
VPS8-202ENST00000421069 NDFIP2Q9NV92 336 aa7.85□□□□□ -1.15
VPS8-202ENST00000421069 USP20Q9Y2K6 914 aa7.85□□□□□ -1.15
VPS8-202ENST00000421069 LCE2BO14633 110 aa7.84□□□□□ -1.15
VPS8-202ENST00000421069 XYLBO75191 536 aa7.84□□□□□ -1.15
VPS8-202ENST00000421069 DNAJC25Q9H1X3 360 aa7.84□□□□□ -1.15
VPS8-202ENST00000421069 E9PSI1 815 aa7.83□□□□□ -1.16
VPS8-202ENST00000421069 KHNYNO15037 678 aaKnown RBP7.83□□□□□ -1.16
VPS8-202ENST00000421069 MAPTP10636 758 aaKnown RBP7.83□□□□□ -1.16
VPS8-202ENST00000421069 ENOX2Q16206 610 aaKnown RBP7.83□□□□□ -1.16
VPS8-202ENST00000421069 ZNF438Q7Z4V0 828 aa7.83□□□□□ -1.16
VPS8-202ENST00000421069 ZNF837Q96EG3 531 aaPredicted RBP7.83□□□□□ -1.16
VPS8-202ENST00000421069 CFHR5Q9BXR6 569 aa7.83□□□□□ -1.16
VPS8-202ENST00000421069 ELP3Q9H9T3 547 aa7.83□□□□□ -1.16
VPS8-202ENST00000421069 EFCC1Q9HA90 598 aa7.83□□□□□ -1.16
VPS8-202ENST00000421069 ATXN7L1Q9ULK2 861 aaPredicted RBP7.83□□□□□ -1.16
VPS8-202ENST00000421069 A6NHS1 94 aa7.82□□□□□ -1.16
VPS8-202ENST00000421069 BNIP3LO60238 219 aa7.82□□□□□ -1.16
VPS8-202ENST00000421069 PPFIA3O75145 1194 aa7.82□□□□□ -1.16
VPS8-202ENST00000421069 PRPF40AO75400 957 aaKnown RBP7.82□□□□□ -1.16
VPS8-202ENST00000421069 TNFRSF21O75509 655 aa7.82□□□□□ -1.16
VPS8-202ENST00000421069 MAPK8P45983 427 aa7.82□□□□□ -1.16
VPS8-202ENST00000421069 SFSWAPQ12872 951 aaKnown RBP7.82□□□□□ -1.16
VPS8-202ENST00000421069 NLRP13Q86W25 1043 aa7.82□□□□□ -1.16
VPS8-202ENST00000421069 SNX29Q8TEQ0 813 aa7.82□□□□□ -1.16
VPS8-202ENST00000421069 CSRNP1Q96S65 589 aa7.82□□□□□ -1.16
VPS8-202ENST00000421069 BCL11AQ9H165 835 aa7.82□□□□□ -1.16
VPS8-202ENST00000421069 PHF24Q9UPV7 400 aa7.82□□□□□ -1.16
VPS8-202ENST00000421069 DCDC2BA2VCK2 349 aa7.81□□□□□ -1.16
VPS8-202ENST00000421069 UNCXA6NJT0 531 aa7.81□□□□□ -1.16
VPS8-202ENST00000421069 LDHBP07195 334 aaKnown RBP7.81□□□□□ -1.16
VPS8-202ENST00000421069 RANGAP1P46060 587 aaPredicted RBP7.81□□□□□ -1.16
VPS8-202ENST00000421069 ATP2B2Q01814 1243 aa7.81□□□□□ -1.16
VPS8-202ENST00000421069 CCINQ13939 588 aa7.81□□□□□ -1.16
VPS8-202ENST00000421069 ALG1LQ6GMV1 187 aa7.81□□□□□ -1.16
VPS8-202ENST00000421069 FOXR1Q6PIV2 292 aa7.81□□□□□ -1.16
VPS8-202ENST00000421069 NANOS1Q8WY41 292 aaKnown RBP7.81□□□□□ -1.16
VPS8-202ENST00000421069 GTPBP3Q969Y2 492 aaKnown RBP7.81□□□□□ -1.16
VPS8-202ENST00000421069 GSX2Q9BZM3 304 aa7.81□□□□□ -1.16
VPS8-202ENST00000421069 MARK1Q9P0L2 795 aa7.81□□□□□ -1.16
VPS8-202ENST00000421069 PNMA6FA0A0J9YX94 578 aa7.8□□□□□ -1.16
VPS8-202ENST00000421069 EIF1AYO14602 144 aaKnown RBP7.8□□□□□ -1.16
VPS8-202ENST00000421069 CPNE3O75131 537 aaKnown RBP7.8□□□□□ -1.16
VPS8-202ENST00000421069 VAMP1P23763 118 aa7.8□□□□□ -1.16
VPS8-202ENST00000421069 TAGLNQ01995 201 aaKnown RBP7.8□□□□□ -1.16
VPS8-202ENST00000421069 FAM182BQ5T319 152 aa7.8□□□□□ -1.16
VPS8-202ENST00000421069 FBF1Q8TES7 1133 aa7.8□□□□□ -1.16
VPS8-202ENST00000421069 PMEPA1Q969W9 287 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms