RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 MASTLQ96GX5 879 aa20.36■□□□□ 0.85
VAT1-202ENST00000420567 ISCA1Q9BUE6 129 aa20.36■□□□□ 0.85
VAT1-202ENST00000420567 ZNF219Q9P2Y4 722 aaPredicted RBP20.36■□□□□ 0.85
VAT1-202ENST00000420567 ANKRD36CQ5JPF3 1778 aa20.36■□□□□ 0.85
VAT1-202ENST00000420567 KLRG2A4D1S0 409 aaPredicted RBP20.35■□□□□ 0.85
VAT1-202ENST00000420567 SLFN5Q08AF3 891 aa20.35■□□□□ 0.85
VAT1-202ENST00000420567 MYD88Q99836 296 aa20.35■□□□□ 0.85
VAT1-202ENST00000420567 TRMT112Q9UI30 125 aaKnown RBP20.35■□□□□ 0.85
VAT1-202ENST00000420567 RIC1Q4ADV7 1423 aa20.35■□□□□ 0.85
VAT1-202ENST00000420567 ARFGEF2Q9Y6D5 1785 aa20.34■□□□□ 0.85
VAT1-202ENST00000420567 NPR1P16066 1061 aa20.34■□□□□ 0.85
VAT1-202ENST00000420567 C3orf67Q6ZVT6 689 aa20.34■□□□□ 0.85
VAT1-202ENST00000420567 MAP3K2Q9Y2U5 619 aa20.34■□□□□ 0.85
VAT1-202ENST00000420567 ADCY9O60503 1353 aa20.34■□□□□ 0.85
VAT1-202ENST00000420567 FLIIQ13045 1269 aa20.33■□□□□ 0.85
VAT1-202ENST00000420567 PRPF40BQ6NWY9 871 aaKnown RBP20.33■□□□□ 0.85
VAT1-202ENST00000420567 SYNE4Q8N205 404 aa20.33■□□□□ 0.85
VAT1-202ENST00000420567 CNKSR1Q969H4 720 aa20.33■□□□□ 0.85
VAT1-202ENST00000420567 RNF123Q5XPI4 1314 aa20.32■□□□□ 0.84
VAT1-202ENST00000420567 SH3TC1Q8TE82 1336 aa20.32■□□□□ 0.84
VAT1-202ENST00000420567 PI4KAP2A4QPH2 592 aa20.32■□□□□ 0.84
VAT1-202ENST00000420567 C21orf2O43822 256 aa20.32■□□□□ 0.84
VAT1-202ENST00000420567 CRY2Q49AN0 593 aa20.32■□□□□ 0.84
VAT1-202ENST00000420567 KSR2Q6VAB6 950 aa20.32■□□□□ 0.84
VAT1-202ENST00000420567 PI4KAP1Q8N8J0 262 aa20.32■□□□□ 0.84
VAT1-202ENST00000420567 METTL22Q9BUU2 404 aaPredicted RBP20.32■□□□□ 0.84
VAT1-202ENST00000420567 HCLS1P14317 486 aaPredicted RBP20.31■□□□□ 0.84
VAT1-202ENST00000420567 ARFGEF1Q9Y6D6 1849 aa20.31■□□□□ 0.84
VAT1-202ENST00000420567 UTRNP46939 3433 aa20.3■□□□□ 0.84
VAT1-202ENST00000420567 HNRNPUQ00839 825 aaKnown RBP eCLIP20.3■□□□□ 0.84
VAT1-202ENST00000420567 RASSF7Q02833 373 aa20.3■□□□□ 0.84
VAT1-202ENST00000420567 FKBP5Q13451 457 aaPredicted RBP20.3■□□□□ 0.84
VAT1-202ENST00000420567 RTL5Q5HYW3 569 aaPredicted RBP20.3■□□□□ 0.84
VAT1-202ENST00000420567 SLC10A5Q5PT55 438 aa20.3■□□□□ 0.84
VAT1-202ENST00000420567 RPGRQ92834 1020 aaKnown RBP20.3■□□□□ 0.84
VAT1-202ENST00000420567 FAM89AQ96GI7 184 aa20.3■□□□□ 0.84
VAT1-202ENST00000420567 NLRP3Q96P20 1036 aa20.3■□□□□ 0.84
VAT1-202ENST00000420567 TRIM28Q13263 835 aaKnown RBP20.29■□□□□ 0.84
VAT1-202ENST00000420567 GOLGB1Q14789 3259 aaKnown RBP20.28■□□□□ 0.84
VAT1-202ENST00000420567 NFKBIEO00221 500 aa20.27■□□□□ 0.84
VAT1-202ENST00000420567 IGKV5-2P06315 115 aa20.27■□□□□ 0.84
VAT1-202ENST00000420567 NEXNQ0ZGT2 675 aa20.27■□□□□ 0.84
VAT1-202ENST00000420567 TRMT2AQ8IZ69 625 aaKnown RBP20.27■□□□□ 0.84
VAT1-202ENST00000420567 ZNF784Q8NCA9 323 aaPredicted RBP20.27■□□□□ 0.84
VAT1-202ENST00000420567 JARID2Q92833 1246 aaPredicted RBP20.27■□□□□ 0.84
VAT1-202ENST00000420567 RBM17Q96I25 401 aaKnown RBP20.27■□□□□ 0.84
VAT1-202ENST00000420567 CWC25Q9NXE8 425 aaPredicted RBP20.27■□□□□ 0.84
VAT1-202ENST00000420567 CHD4Q14839 1912 aa20.26■□□□□ 0.83
VAT1-202ENST00000420567 ALDH1B1P30837 517 aa20.26■□□□□ 0.83
VAT1-202ENST00000420567 CWF19L2Q2TBE0 894 aaKnown RBP20.26■□□□□ 0.83
VAT1-202ENST00000420567 C9orf131Q5VYM1 1079 aa20.26■□□□□ 0.83
VAT1-202ENST00000420567 OLFM4Q6UX06 510 aa20.26■□□□□ 0.83
VAT1-202ENST00000420567 CCDC191Q8NCU4 936 aa20.26■□□□□ 0.83
VAT1-202ENST00000420567 DNAAF4Q8WXU2 420 aa20.26■□□□□ 0.83
VAT1-202ENST00000420567 HOXA10P31260 410 aaPredicted RBP20.25■□□□□ 0.83
VAT1-202ENST00000420567 ZBTB38Q8NAP3 1195 aaPredicted RBP20.25■□□□□ 0.83
VAT1-202ENST00000420567 C7orf43Q8WVR3 580 aa20.25■□□□□ 0.83
VAT1-202ENST00000420567 RNF181Q9P0P0 153 aa20.25■□□□□ 0.83
VAT1-202ENST00000420567 SLX4Q8IY92 1834 aa20.25■□□□□ 0.83
VAT1-202ENST00000420567 F6X3S4 739 aa20.24■□□□□ 0.83
VAT1-202ENST00000420567 IRS4O14654 1257 aaPredicted RBP20.24■□□□□ 0.83
VAT1-202ENST00000420567 PRELPP51888 382 aa20.24■□□□□ 0.83
VAT1-202ENST00000420567 SLC51AQ86UW1 340 aa20.24■□□□□ 0.83
VAT1-202ENST00000420567 BCL2L13Q9BXK5 485 aa20.24■□□□□ 0.83
VAT1-202ENST00000420567 NEURL1BA8MQ27 555 aa20.23■□□□□ 0.83
VAT1-202ENST00000420567 PCCAP05165 728 aaPredicted RBP20.23■□□□□ 0.83
VAT1-202ENST00000420567 CCDC93Q567U6 631 aa20.23■□□□□ 0.83
VAT1-202ENST00000420567 SOGA3Q5TF21 947 aa20.23■□□□□ 0.83
VAT1-202ENST00000420567 MRPL50Q8N5N7 158 aaKnown RBP20.23■□□□□ 0.83
VAT1-202ENST00000420567 CRAMP1Q96RY5 1269 aa20.23■□□□□ 0.83
VAT1-202ENST00000420567 ABCC4O15439 1325 aa20.23■□□□□ 0.83
VAT1-202ENST00000420567 CACNA1SQ13698 1873 aa20.22■□□□□ 0.83
VAT1-202ENST00000420567 PPEF1O14829 653 aaPredicted RBP20.22■□□□□ 0.83
VAT1-202ENST00000420567 SSH1Q8WYL5 1049 aa20.22■□□□□ 0.83
VAT1-202ENST00000420567 DDX60Q8IY21 1712 aaKnown RBP20.22■□□□□ 0.83
VAT1-202ENST00000420567 ZNF526Q8TF50 670 aaPredicted RBP20.21■□□□□ 0.83
VAT1-202ENST00000420567 TAOK3Q9H2K8 898 aa20.21■□□□□ 0.83
VAT1-202ENST00000420567 LMNB1P20700 586 aa20.2■□□□□ 0.82
VAT1-202ENST00000420567 DDX46Q7L014 1031 aaKnown RBP20.2■□□□□ 0.82
VAT1-202ENST00000420567 LINS1Q8NG48 757 aa20.2■□□□□ 0.82
VAT1-202ENST00000420567 LAMB2P55268 1798 aa20.19■□□□□ 0.82
VAT1-202ENST00000420567 SF3B3Q15393 1217 aaKnown RBP20.19■□□□□ 0.82
VAT1-202ENST00000420567 SMC4Q9NTJ3 1288 aa20.19■□□□□ 0.82
VAT1-202ENST00000420567 CDHR2Q9BYE9 1310 aa20.19■□□□□ 0.82
VAT1-202ENST00000420567 GRAPQ13588 217 aa20.18■□□□□ 0.82
VAT1-202ENST00000420567 GCKRQ14397 625 aa20.18■□□□□ 0.82
VAT1-202ENST00000420567 BEND3Q5T5X7 828 aa20.18■□□□□ 0.82
VAT1-202ENST00000420567 GRAPLQ8TC17 118 aaPredicted RBP20.18■□□□□ 0.82
VAT1-202ENST00000420567 CCDC85AQ96PX6 553 aaPredicted RBP20.18■□□□□ 0.82
VAT1-202ENST00000420567 LTBP3Q9NS15 1303 aa20.18■□□□□ 0.82
VAT1-202ENST00000420567 ALDH1L2Q3SY69 923 aa20.17■□□□□ 0.82
VAT1-202ENST00000420567 SLC4A10Q6U841 1118 aa20.17■□□□□ 0.82
VAT1-202ENST00000420567 UBE3BQ7Z3V4 1068 aa20.17■□□□□ 0.82
VAT1-202ENST00000420567 SNED1Q8TER0 1413 aa20.17■□□□□ 0.82
VAT1-202ENST00000420567 PDE8AO60658 829 aa20.16■□□□□ 0.82
VAT1-202ENST00000420567 CT47B1P0C2W7 299 aaPredicted RBP20.16■□□□□ 0.82
VAT1-202ENST00000420567 HSP90B1P14625 803 aaKnown RBP20.16■□□□□ 0.82
VAT1-202ENST00000420567 FKBP4Q02790 459 aaKnown RBP eCLIP20.16■□□□□ 0.82
VAT1-202ENST00000420567 RTKN2Q8IZC4 609 aa20.16■□□□□ 0.82
VAT1-202ENST00000420567 CELF1Q92879 486 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms