RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 ERCC3P19447 782 aa5.12□□□□□ -1.59
PTPN22-202ENST00000420377 ATN1P54259 1190 aaPredicted RBP5.12□□□□□ -1.59
PTPN22-202ENST00000420377 KANK4Q5T7N3 995 aaPredicted RBP5.12□□□□□ -1.59
PTPN22-202ENST00000420377 ITFG2Q969R8 447 aa5.12□□□□□ -1.59
PTPN22-202ENST00000420377 CTCFP49711 727 aaPredicted RBP5.11□□□□□ -1.59
PTPN22-202ENST00000420377 AEBP1Q8IUX7 1158 aa5.11□□□□□ -1.59
PTPN22-202ENST00000420377 CCDC82Q8N4S0 544 aa5.11□□□□□ -1.59
PTPN22-202ENST00000420377 ZNF513Q8N8E2 541 aaPredicted RBP5.11□□□□□ -1.59
PTPN22-202ENST00000420377 DDX17Q92841 729 aaKnown RBP5.11□□□□□ -1.59
PTPN22-202ENST00000420377 BOLA1Q9Y3E2 137 aa5.11□□□□□ -1.59
PTPN22-202ENST00000420377 MON2Q7Z3U7 1717 aa5.11□□□□□ -1.59
PTPN22-202ENST00000420377 ESPNB1AK53 854 aa5.11□□□□□ -1.59
PTPN22-202ENST00000420377 BRD1O95696 1058 aa5.11□□□□□ -1.59
PTPN22-202ENST00000420377 AMHR2Q16671 573 aa5.11□□□□□ -1.59
PTPN22-202ENST00000420377 DDX46Q7L014 1031 aaKnown RBP5.11□□□□□ -1.59
PTPN22-202ENST00000420377 FAM210AQ96ND0 272 aa5.11□□□□□ -1.59
PTPN22-202ENST00000420377 MYH16Q9H6N6 1097 aa5.11□□□□□ -1.59
PTPN22-202ENST00000420377 CCDC172P0C7W6 258 aa5.1□□□□□ -1.59
PTPN22-202ENST00000420377 HIC1Q14526 733 aa5.1□□□□□ -1.59
PTPN22-202ENST00000420377 RGL3Q3MIN7 710 aa5.1□□□□□ -1.59
PTPN22-202ENST00000420377 MYCBPQ99417 103 aaPredicted RBP5.1□□□□□ -1.59
PTPN22-202ENST00000420377 PHOX2BQ99453 314 aa5.1□□□□□ -1.59
PTPN22-202ENST00000420377 BRCA1P38398 1863 aaKnown RBP5.1□□□□□ -1.59
PTPN22-202ENST00000420377 NCAPD2Q15021 1401 aa5.1□□□□□ -1.59
PTPN22-202ENST00000420377 DLEC1Q9Y238 1755 aa5.1□□□□□ -1.59
PTPN22-202ENST00000420377 SSFA2P28290 1259 aa5.1□□□□□ -1.59
PTPN22-202ENST00000420377 BORCS6Q96GS4 357 aa5.1□□□□□ -1.59
PTPN22-202ENST00000420377 CCDC94Q9BW85 323 aaPredicted RBP5.1□□□□□ -1.59
PTPN22-202ENST00000420377 TAF1LQ8IZX4 1826 aa5.1□□□□□ -1.59
PTPN22-202ENST00000420377 PTGDRQ13258 359 aa5.1□□□□□ -1.59
PTPN22-202ENST00000420377 RC3H1Q5TC82 1133 aaKnown RBP5.1□□□□□ -1.59
PTPN22-202ENST00000420377 POTEGQ6S5H5 508 aa5.1□□□□□ -1.59
PTPN22-202ENST00000420377 NOL8Q76FK4 1167 aaKnown RBP5.1□□□□□ -1.59
PTPN22-202ENST00000420377 ARHGEF25Q86VW2 580 aa5.1□□□□□ -1.59
PTPN22-202ENST00000420377 PMFBP1Q8TBY8 1022 aa5.1□□□□□ -1.59
PTPN22-202ENST00000420377 MTA3Q9BTC8 594 aa5.1□□□□□ -1.59
PTPN22-202ENST00000420377 PNPLA7Q6ZV29 1317 aa5.09□□□□□ -1.59
PTPN22-202ENST00000420377 KIF16BQ96L93 1317 aa5.09□□□□□ -1.59
PTPN22-202ENST00000420377 LTBP3Q9NS15 1303 aa5.09□□□□□ -1.59
PTPN22-202ENST00000420377 ANP32CO43423 234 aa5.09□□□□□ -1.59
PTPN22-202ENST00000420377 SCP2P22307 547 aa5.09□□□□□ -1.59
PTPN22-202ENST00000420377 UVSSAQ2YD98 709 aa5.09□□□□□ -1.59
PTPN22-202ENST00000420377 DNAJC14Q6Y2X3 702 aaPredicted RBP5.09□□□□□ -1.59
PTPN22-202ENST00000420377 HHIPL1Q96JK4 782 aa5.09□□□□□ -1.59
PTPN22-202ENST00000420377 WWC3Q9ULE0 1092 aa5.09□□□□□ -1.59
PTPN22-202ENST00000420377 PLEKHH1Q9ULM0 1364 aa5.09□□□□□ -1.59
PTPN22-202ENST00000420377 KIF1CO43896 1103 aaKnown RBP5.09□□□□□ -1.6
PTPN22-202ENST00000420377 FCHSD2O94868 740 aa5.09□□□□□ -1.6
PTPN22-202ENST00000420377 MDM2Q00987 491 aaPredicted RBP5.09□□□□□ -1.6
PTPN22-202ENST00000420377 EVX2Q03828 476 aa5.09□□□□□ -1.6
PTPN22-202ENST00000420377 CT47A1Q5JQC4 288 aaPredicted RBP5.09□□□□□ -1.6
PTPN22-202ENST00000420377 POM121Q96HA1 1249 aa5.09□□□□□ -1.6
PTPN22-202ENST00000420377 NCAPGQ9BPX3 1015 aa5.09□□□□□ -1.6
PTPN22-202ENST00000420377 NBPF3Q9H094 633 aa5.09□□□□□ -1.6
PTPN22-202ENST00000420377 STK26Q9P289 416 aa5.09□□□□□ -1.6
PTPN22-202ENST00000420377 ARFGEF2Q9Y6D5 1785 aa5.09□□□□□ -1.6
PTPN22-202ENST00000420377 GOLGA6CA6NDK9 693 aa5.08□□□□□ -1.6
PTPN22-202ENST00000420377 GOLGA6BA6NDN3 693 aa5.08□□□□□ -1.6
PTPN22-202ENST00000420377 G3V3G9 751 aa5.08□□□□□ -1.6
PTPN22-202ENST00000420377 GCP02774 474 aa5.08□□□□□ -1.6
PTPN22-202ENST00000420377 GOLGA6DP0CG33 693 aa5.08□□□□□ -1.6
PTPN22-202ENST00000420377 MFAP1P55081 439 aaKnown RBP5.08□□□□□ -1.6
PTPN22-202ENST00000420377 TSR1Q2NL82 804 aaKnown RBP5.08□□□□□ -1.6
PTPN22-202ENST00000420377 TMCO4Q5TGY1 634 aa5.08□□□□□ -1.6
PTPN22-202ENST00000420377 MARCH10Q8NA82 808 aaPredicted RBP5.08□□□□□ -1.6
PTPN22-202ENST00000420377 PAIP2Q9BPZ3 127 aaKnown RBP5.08□□□□□ -1.6
PTPN22-202ENST00000420377 GOLGA6AQ9NYA3 693 aa5.08□□□□□ -1.6
PTPN22-202ENST00000420377 ADGRF5Q8IZF2 1346 aa5.08□□□□□ -1.6
PTPN22-202ENST00000420377 NRXN2Q9P2S2 1712 aa5.08□□□□□ -1.6
PTPN22-202ENST00000420377 C19orf67A6NJJ6 358 aa5.08□□□□□ -1.6
PTPN22-202ENST00000420377 TULP2O00295 520 aa5.08□□□□□ -1.6
PTPN22-202ENST00000420377 C16orf71Q8IYS4 520 aaPredicted RBP5.08□□□□□ -1.6
PTPN22-202ENST00000420377 NGDNQ8NEJ9 315 aaKnown RBP5.08□□□□□ -1.6
PTPN22-202ENST00000420377 NUDT16Q96DE0 195 aaKnown RBP5.08□□□□□ -1.6
PTPN22-202ENST00000420377 PPP4R2Q9NY27 417 aa5.08□□□□□ -1.6
PTPN22-202ENST00000420377 SCN4AP35499 1836 aa5.07□□□□□ -1.6
PTPN22-202ENST00000420377 CCER2I3L3R5 266 aa5.07□□□□□ -1.6
PTPN22-202ENST00000420377 EVI5O60447 810 aa5.07□□□□□ -1.6
PTPN22-202ENST00000420377 CSPP1Q1MSJ5 1256 aa5.07□□□□□ -1.6
PTPN22-202ENST00000420377 SMC4Q9NTJ3 1288 aa5.07□□□□□ -1.6
PTPN22-202ENST00000420377 POLR3EQ9NVU0 708 aa5.07□□□□□ -1.6
PTPN22-202ENST00000420377 POGKQ9P215 609 aa5.07□□□□□ -1.6
PTPN22-202ENST00000420377 RPS6KL1Q9Y6S9 549 aa5.07□□□□□ -1.6
PTPN22-202ENST00000420377 C4AP0C0L4 1744 aa5.07□□□□□ -1.6
PTPN22-202ENST00000420377 PRR36Q9H6K5 1346 aa5.07□□□□□ -1.6
PTPN22-202ENST00000420377 MAP3K7O43318 606 aa5.07□□□□□ -1.6
PTPN22-202ENST00000420377 TPD52L2O43399 206 aaKnown RBP5.07□□□□□ -1.6
PTPN22-202ENST00000420377 COQ9O75208 318 aa5.07□□□□□ -1.6
PTPN22-202ENST00000420377 RIPK4P57078 832 aa5.07□□□□□ -1.6
PTPN22-202ENST00000420377 MCM6Q14566 821 aa5.07□□□□□ -1.6
PTPN22-202ENST00000420377 NFKBIBQ15653 356 aa5.07□□□□□ -1.6
PTPN22-202ENST00000420377 CTR9Q6PD62 1173 aa5.07□□□□□ -1.6
PTPN22-202ENST00000420377 EP400NLQ6ZTU2 488 aa5.07□□□□□ -1.6
PTPN22-202ENST00000420377 APBB1IPQ7Z5R6 666 aaPredicted RBP5.07□□□□□ -1.6
PTPN22-202ENST00000420377 CHMP4CQ96CF2 233 aa5.07□□□□□ -1.6
PTPN22-202ENST00000420377 CGNQ9P2M7 1197 aaKnown RBP5.07□□□□□ -1.6
PTPN22-202ENST00000420377 UBR3Q6ZT12 1888 aa5.07□□□□□ -1.6
PTPN22-202ENST00000420377 DICER1Q9UPY3 1922 aaKnown RBP5.06□□□□□ -1.6
PTPN22-202ENST00000420377 CD163L1Q9NR16 1453 aa5.06□□□□□ -1.6
PTPN22-202ENST00000420377 C4BP0C0L5 1744 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms