RNA–Protein interactions for RNA: ENST00000420043.1

PHF3-203, Transcript of PHD finger protein 3, humanhuman

TSL 3

Gene PHF3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-203ENST00000420043 ANP32AP39687 249 aaKnown RBP12.8□□□□□ -0.36
PHF3-203ENST00000420043 CWF19L2Q2TBE0 894 aaKnown RBP12.8□□□□□ -0.36
PHF3-203ENST00000420043 DNAJC10Q8IXB1 793 aa12.8□□□□□ -0.36
PHF3-203ENST00000420043 AK7Q96M32 723 aa12.8□□□□□ -0.36
PHF3-203ENST00000420043 QSER1Q2KHR3 1735 aa12.79□□□□□ -0.36
PHF3-203ENST00000420043 LOC102724428A0A0B4J2F2 783 aa12.79□□□□□ -0.36
PHF3-203ENST00000420043 NBPF26B4DH59 902 aa12.79□□□□□ -0.36
PHF3-203ENST00000420043 NBPF7P0C2Y1 421 aaPredicted RBP12.79□□□□□ -0.36
PHF3-203ENST00000420043 SIK1P57059 783 aa12.79□□□□□ -0.36
PHF3-203ENST00000420043 NBPF10Q6P3W6 841 aaKnown RBP12.79□□□□□ -0.36
PHF3-203ENST00000420043 LRP10Q7Z4F1 713 aa12.79□□□□□ -0.36
PHF3-203ENST00000420043 NPM2Q86SE8 214 aaKnown RBP12.79□□□□□ -0.36
PHF3-203ENST00000420043 NBPF15Q8N660 670 aa12.79□□□□□ -0.36
PHF3-203ENST00000420043 LINC00116Q8NCU8 138 aa12.79□□□□□ -0.36
PHF3-203ENST00000420043 BCL11AQ9H165 835 aa12.79□□□□□ -0.36
PHF3-203ENST00000420043 ZNF330Q9Y3S2 320 aaPredicted RBP12.79□□□□□ -0.36
PHF3-203ENST00000420043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.78□□□□□ -0.36
PHF3-203ENST00000420043 PNMA6EA0A0J9YXQ4 647 aa12.78□□□□□ -0.36
PHF3-203ENST00000420043 NEURL1BA8MQ27 555 aa12.78□□□□□ -0.36
PHF3-203ENST00000420043 YBX3P16989 372 aaKnown RBP eCLIP12.78□□□□□ -0.36
PHF3-203ENST00000420043 ATP6V1AP38606 617 aa12.78□□□□□ -0.36
PHF3-203ENST00000420043 ITPK1Q13572 414 aa12.78□□□□□ -0.36
PHF3-203ENST00000420043 C8orf34Q49A92 452 aa12.78□□□□□ -0.36
PHF3-203ENST00000420043 SAMD1Q6SPF0 538 aaPredicted RBP12.78□□□□□ -0.36
PHF3-203ENST00000420043 KIF6Q6ZMV9 814 aa12.78□□□□□ -0.36
PHF3-203ENST00000420043 PPP1R42Q7Z4L9 355 aa12.78□□□□□ -0.36
PHF3-203ENST00000420043 ITGB4P16144 1822 aa12.78□□□□□ -0.36
PHF3-203ENST00000420043 IBTKQ9P2D0 1353 aaPredicted RBP12.78□□□□□ -0.36
PHF3-203ENST00000420043 SRGAP3O43295 1099 aa12.77□□□□□ -0.37
PHF3-203ENST00000420043 IGKV5-2P06315 115 aa12.77□□□□□ -0.37
PHF3-203ENST00000420043 GCKRQ14397 625 aa12.77□□□□□ -0.37
PHF3-203ENST00000420043 HSP90AB4PQ58FF6 505 aa12.77□□□□□ -0.37
PHF3-203ENST00000420043 FLAD1Q8NFF5 587 aa12.77□□□□□ -0.37
PHF3-203ENST00000420043 WWC3Q9ULE0 1092 aa12.77□□□□□ -0.37
PHF3-203ENST00000420043 EXOC6BQ9Y2D4 811 aa12.77□□□□□ -0.37
PHF3-203ENST00000420043 RAB11FIP3O75154 756 aa12.76□□□□□ -0.37
PHF3-203ENST00000420043 OS9Q13438 667 aaPredicted RBP12.76□□□□□ -0.37
PHF3-203ENST00000420043 POLA2Q14181 598 aa12.76□□□□□ -0.37
PHF3-203ENST00000420043 TTLL7Q6ZT98 887 aa12.76□□□□□ -0.37
PHF3-203ENST00000420043 SSH3Q8TE77 659 aa12.76□□□□□ -0.37
PHF3-203ENST00000420043 LRRCC1Q9C099 1032 aa12.76□□□□□ -0.37
PHF3-203ENST00000420043 ZBTB3Q9H5J0 574 aa12.76□□□□□ -0.37
PHF3-203ENST00000420043 UTYO14607 1347 aa12.76□□□□□ -0.37
PHF3-203ENST00000420043 COL24A1Q17RW2 1714 aa12.76□□□□□ -0.37
PHF3-203ENST00000420043 ATP5J2-PTCD1G3V325 749 aa12.75□□□□□ -0.37
PHF3-203ENST00000420043 GNPATO15228 680 aa12.75□□□□□ -0.37
PHF3-203ENST00000420043 SMARCA5O60264 1052 aaPredicted RBP12.75□□□□□ -0.37
PHF3-203ENST00000420043 SURF6O75683 361 aaKnown RBP12.75□□□□□ -0.37
PHF3-203ENST00000420043 C4BP0C0L5 1744 aa12.75□□□□□ -0.37
PHF3-203ENST00000420043 CYP19A1P11511 503 aaPredicted RBP12.75□□□□□ -0.37
PHF3-203ENST00000420043 SUCLG2Q96I99 432 aa12.75□□□□□ -0.37
PHF3-203ENST00000420043 UPF2Q9HAU5 1272 aaKnown RBP12.75□□□□□ -0.37
PHF3-203ENST00000420043 TAF1LQ8IZX4 1826 aa12.74□□□□□ -0.37
PHF3-203ENST00000420043 A0A087WZG4 1122 aa12.74□□□□□ -0.37
PHF3-203ENST00000420043 MTX1Q13505 466 aa12.74□□□□□ -0.37
PHF3-203ENST00000420043 SLC4A9Q96Q91 983 aa12.74□□□□□ -0.37
PHF3-203ENST00000420043 CWC25Q9NXE8 425 aaPredicted RBP12.74□□□□□ -0.37
PHF3-203ENST00000420043 HMGB2P26583 209 aaKnown RBP12.73□□□□□ -0.37
PHF3-203ENST00000420043 SSFA2P28290 1259 aa12.73□□□□□ -0.37
PHF3-203ENST00000420043 BMP2KLQ5H9B9 411 aa12.73□□□□□ -0.37
PHF3-203ENST00000420043 PLEKHM2Q8IWE5 1019 aa12.73□□□□□ -0.37
PHF3-203ENST00000420043 BICC1Q9H694 974 aaKnown RBP12.73□□□□□ -0.37
PHF3-203ENST00000420043 CD2APQ9Y5K6 639 aa12.73□□□□□ -0.37
PHF3-203ENST00000420043 CHD4Q14839 1912 aa12.72□□□□□ -0.37
PHF3-203ENST00000420043 MAP3K15Q6ZN16 1313 aa12.72□□□□□ -0.37
PHF3-203ENST00000420043 GRIN3BO60391 1043 aa12.72□□□□□ -0.37
PHF3-203ENST00000420043 HSP90AB3PQ58FF7 597 aa12.72□□□□□ -0.37
PHF3-203ENST00000420043 UBE3BQ7Z3V4 1068 aa12.72□□□□□ -0.37
PHF3-203ENST00000420043 ERC1Q8IUD2 1116 aa12.72□□□□□ -0.37
PHF3-203ENST00000420043 CCDC191Q8NCU4 936 aa12.72□□□□□ -0.37
PHF3-203ENST00000420043 KIF1BPQ96EK5 621 aa12.72□□□□□ -0.37
PHF3-203ENST00000420043 ARFGEF2Q9Y6D5 1785 aa12.71□□□□□ -0.37
PHF3-203ENST00000420043 EIF5BO60841 1220 aaKnown RBP12.71□□□□□ -0.37
PHF3-203ENST00000420043 IL6STP40189 918 aaPredicted RBP12.71□□□□□ -0.37
PHF3-203ENST00000420043 TCIRG1Q13488 830 aa12.71□□□□□ -0.37
PHF3-203ENST00000420043 C16orf71Q8IYS4 520 aaPredicted RBP12.71□□□□□ -0.37
PHF3-203ENST00000420043 CCDC87Q9NVE4 849 aa12.71□□□□□ -0.37
PHF3-203ENST00000420043 ZBTB1Q9Y2K1 713 aa12.71□□□□□ -0.37
PHF3-203ENST00000420043 G3BP1Q13283 466 aaKnown RBP eCLIP12.7□□□□□ -0.38
PHF3-203ENST00000420043 TRAPPC3LQ5T215 181 aa12.7□□□□□ -0.38
PHF3-203ENST00000420043 TTC22Q5TAA0 569 aa12.7□□□□□ -0.38
PHF3-203ENST00000420043 DZIP3Q86Y13 1208 aaKnown RBP12.7□□□□□ -0.38
PHF3-203ENST00000420043 RHPN1Q8TCX5 695 aa12.7□□□□□ -0.38
PHF3-203ENST00000420043 JARID2Q92833 1246 aaPredicted RBP12.7□□□□□ -0.38
PHF3-203ENST00000420043 NOP58Q9Y2X3 529 aaKnown RBP12.7□□□□□ -0.38
PHF3-203ENST00000420043 UBR3Q6ZT12 1888 aa12.7□□□□□ -0.38
PHF3-203ENST00000420043 COL15A1P39059 1388 aa12.69□□□□□ -0.38
PHF3-203ENST00000420043 H7C1W4 665 aa12.69□□□□□ -0.38
PHF3-203ENST00000420043 CRKLP46109 303 aaKnown RBP12.69□□□□□ -0.38
PHF3-203ENST00000420043 C1QTNF8P60827 252 aa12.69□□□□□ -0.38
PHF3-203ENST00000420043 GIGYF2Q6Y7W6 1299 aaKnown RBP12.69□□□□□ -0.38
PHF3-203ENST00000420043 OTUD7AQ8TE49 926 aaPredicted RBP12.69□□□□□ -0.38
PHF3-203ENST00000420043 ARHGEF1Q92888 912 aaKnown RBP12.69□□□□□ -0.38
PHF3-203ENST00000420043 DDRGK1Q96HY6 314 aa12.69□□□□□ -0.38
PHF3-203ENST00000420043 ISCA1Q9BUE6 129 aa12.69□□□□□ -0.38
PHF3-203ENST00000420043 RTCBQ9Y3I0 505 aaKnown RBP12.69□□□□□ -0.38
PHF3-203ENST00000420043 AFDNP55196 1824 aaKnown RBP12.69□□□□□ -0.38
PHF3-203ENST00000420043 ERVV-1B6SEH8 477 aa12.68□□□□□ -0.38
PHF3-203ENST00000420043 CDC45O75419 566 aa12.68□□□□□ -0.38
PHF3-203ENST00000420043 MMP10P09238 476 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms