RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 TRIM67Q6ZTA4 783 aa9.66□□□□□ -0.86
EPHA4-205ENST00000419964 FAM9BQ8IZU0 186 aa9.66□□□□□ -0.86
EPHA4-205ENST00000419964 CYLDQ9NQC7 956 aa9.66□□□□□ -0.86
EPHA4-205ENST00000419964 DNAAF2Q9NVR5 837 aaKnown RBP9.66□□□□□ -0.86
EPHA4-205ENST00000419964 ASXL1Q8IXJ9 1541 aa9.66□□□□□ -0.86
EPHA4-205ENST00000419964 ZMYM3Q14202 1370 aa9.65□□□□□ -0.86
EPHA4-205ENST00000419964 EVC2Q86UK5 1308 aa9.65□□□□□ -0.86
EPHA4-205ENST00000419964 CFAP65Q6ZU64 1925 aaKnown RBP9.65□□□□□ -0.86
EPHA4-205ENST00000419964 ELOAQ14241 798 aaKnown RBP9.65□□□□□ -0.86
EPHA4-205ENST00000419964 LARGE2Q8N3Y3 721 aa9.65□□□□□ -0.86
EPHA4-205ENST00000419964 ZNF784Q8NCA9 323 aaPredicted RBP9.65□□□□□ -0.86
EPHA4-205ENST00000419964 QRICH2Q9H0J4 1663 aa9.64□□□□□ -0.87
EPHA4-205ENST00000419964 USP17L15C9J2P7 530 aa9.64□□□□□ -0.87
EPHA4-205ENST00000419964 USP17L10C9JJH3 530 aa9.64□□□□□ -0.87
EPHA4-205ENST00000419964 USP17L13C9JLJ4 530 aa9.64□□□□□ -0.87
EPHA4-205ENST00000419964 USP17L12C9JPN9 530 aa9.64□□□□□ -0.87
EPHA4-205ENST00000419964 USP17L11C9JVI0 530 aa9.64□□□□□ -0.87
EPHA4-205ENST00000419964 USP17L21D6R901 530 aa9.64□□□□□ -0.87
EPHA4-205ENST00000419964 USP17L18D6R9N7 530 aa9.64□□□□□ -0.87
EPHA4-205ENST00000419964 USP17L22D6RA61 530 aa9.64□□□□□ -0.87
EPHA4-205ENST00000419964 USP17L17D6RBQ6 530 aa9.64□□□□□ -0.87
EPHA4-205ENST00000419964 USP17L19D6RCP7 530 aa9.64□□□□□ -0.87
EPHA4-205ENST00000419964 USP17L20D6RJB6 530 aa9.64□□□□□ -0.87
EPHA4-205ENST00000419964 SMPD1P17405 629 aa9.64□□□□□ -0.87
EPHA4-205ENST00000419964 SCTRP47872 440 aa9.64□□□□□ -0.87
EPHA4-205ENST00000419964 USP17L24Q0WX57 530 aa9.64□□□□□ -0.87
EPHA4-205ENST00000419964 PTK7Q13308 1070 aa9.64□□□□□ -0.87
EPHA4-205ENST00000419964 RETREG2Q8NC44 543 aa9.64□□□□□ -0.87
EPHA4-205ENST00000419964 PDZRN3Q9UPQ7 1066 aa9.64□□□□□ -0.87
EPHA4-205ENST00000419964 RBM19Q9Y4C8 960 aaKnown RBP9.64□□□□□ -0.87
EPHA4-205ENST00000419964 A2ML1A8K2U0 1454 aa9.64□□□□□ -0.87
EPHA4-205ENST00000419964 NLRP1Q9C000 1473 aa9.64□□□□□ -0.87
EPHA4-205ENST00000419964 CLDN10P78369 228 aa9.63□□□□□ -0.87
EPHA4-205ENST00000419964 PSME1Q06323 249 aa9.63□□□□□ -0.87
EPHA4-205ENST00000419964 CRTC2Q53ET0 693 aaPredicted RBP9.63□□□□□ -0.87
EPHA4-205ENST00000419964 PNISRQ8TF01 805 aaKnown RBP9.63□□□□□ -0.87
EPHA4-205ENST00000419964 PCDHGA11Q9Y5H2 935 aa9.63□□□□□ -0.87
EPHA4-205ENST00000419964 LRPPRCP42704 1394 aaKnown RBP9.63□□□□□ -0.87
EPHA4-205ENST00000419964 TNRQ92752 1358 aa9.63□□□□□ -0.87
EPHA4-205ENST00000419964 ARHGEF28Q8N1W1 1705 aaKnown RBP9.62□□□□□ -0.87
EPHA4-205ENST00000419964 DLC1Q96QB1 1528 aa9.62□□□□□ -0.87
EPHA4-205ENST00000419964 MYOM1P52179 1685 aa9.62□□□□□ -0.87
EPHA4-205ENST00000419964 LILRA1O75019 489 aa9.62□□□□□ -0.87
EPHA4-205ENST00000419964 PDIA4P13667 645 aaKnown RBP9.62□□□□□ -0.87
EPHA4-205ENST00000419964 ERICH6BQ5W0A0 696 aa9.62□□□□□ -0.87
EPHA4-205ENST00000419964 ZNF594Q96JF6 807 aaPredicted RBP9.62□□□□□ -0.87
EPHA4-205ENST00000419964 NOVA2Q9UNW9 492 aaKnown RBP9.62□□□□□ -0.87
EPHA4-205ENST00000419964 TRAK1Q9UPV9 953 aa9.62□□□□□ -0.87
EPHA4-205ENST00000419964 USTQ9Y2C2 406 aa9.62□□□□□ -0.87
EPHA4-205ENST00000419964 RIMS2Q9UQ26 1411 aa9.62□□□□□ -0.87
EPHA4-205ENST00000419964 WDR4P57081 412 aaKnown RBP9.61□□□□□ -0.87
EPHA4-205ENST00000419964 MLECQ14165 292 aa9.61□□□□□ -0.87
EPHA4-205ENST00000419964 CYP2U1Q7Z449 544 aa9.61□□□□□ -0.87
EPHA4-205ENST00000419964 ANKMY2Q8IV38 441 aa9.61□□□□□ -0.87
EPHA4-205ENST00000419964 SIX5Q8N196 739 aa9.61□□□□□ -0.87
EPHA4-205ENST00000419964 FAM200AQ8TCP9 573 aa9.61□□□□□ -0.87
EPHA4-205ENST00000419964 NSD2O96028 1365 aa9.61□□□□□ -0.87
EPHA4-205ENST00000419964 ATAD2Q6PL18 1390 aa9.61□□□□□ -0.87
EPHA4-205ENST00000419964 ALKQ9UM73 1620 aa9.6□□□□□ -0.87
EPHA4-205ENST00000419964 YTHDC2Q9H6S0 1430 aaKnown RBP9.6□□□□□ -0.87
EPHA4-205ENST00000419964 ZBTB7BO15156 539 aaPredicted RBP9.6□□□□□ -0.87
EPHA4-205ENST00000419964 ZIC2O95409 532 aaPredicted RBP9.6□□□□□ -0.87
EPHA4-205ENST00000419964 CCDC102BQ68D86 513 aa9.6□□□□□ -0.87
EPHA4-205ENST00000419964 ITPKCQ96DU7 683 aa9.6□□□□□ -0.87
EPHA4-205ENST00000419964 KLF16Q9BXK1 252 aaPredicted RBP9.6□□□□□ -0.87
EPHA4-205ENST00000419964 OSBPL3Q9H4L5 887 aa9.6□□□□□ -0.87
EPHA4-205ENST00000419964 MYO5BQ9ULV0 1848 aa9.6□□□□□ -0.87
EPHA4-205ENST00000419964 USP32Q8NFA0 1604 aa9.6□□□□□ -0.87
EPHA4-205ENST00000419964 PDE3BQ13370 1112 aa9.59□□□□□ -0.87
EPHA4-205ENST00000419964 CCDC184Q52MB2 194 aa9.59□□□□□ -0.87
EPHA4-205ENST00000419964 NGEFQ8N5V2 710 aa9.59□□□□□ -0.87
EPHA4-205ENST00000419964 TPCN2Q8NHX9 752 aa9.59□□□□□ -0.87
EPHA4-205ENST00000419964 GNRH1P01148 92 aa9.58□□□□□ -0.88
EPHA4-205ENST00000419964 TIMP2P16035 220 aa9.58□□□□□ -0.88
EPHA4-205ENST00000419964 ADD1P35611 737 aaKnown RBP9.58□□□□□ -0.88
EPHA4-205ENST00000419964 SEC13P55735 322 aa9.58□□□□□ -0.88
EPHA4-205ENST00000419964 DPYDQ12882 1025 aa9.58□□□□□ -0.88
EPHA4-205ENST00000419964 CC2D1BQ5T0F9 858 aaKnown RBP9.58□□□□□ -0.88
EPHA4-205ENST00000419964 TMEM132EQ6IEE7 984 aa9.58□□□□□ -0.88
EPHA4-205ENST00000419964 HPS1Q92902 700 aa9.58□□□□□ -0.88
EPHA4-205ENST00000419964 POGKQ9P215 609 aa9.58□□□□□ -0.88
EPHA4-205ENST00000419964 ZMIZ1Q9ULJ6 1067 aa9.58□□□□□ -0.88
EPHA4-205ENST00000419964 KIAA1024Q9UPX6 916 aa9.58□□□□□ -0.88
EPHA4-205ENST00000419964 CGNL1Q0VF96 1302 aa9.57□□□□□ -0.88
EPHA4-205ENST00000419964 WDR43Q15061 677 aaKnown RBP eCLIP9.57□□□□□ -0.88
EPHA4-205ENST00000419964 Q6ZVU0 165 aa9.57□□□□□ -0.88
EPHA4-205ENST00000419964 TRAIPQ9BWF2 469 aa9.57□□□□□ -0.88
EPHA4-205ENST00000419964 ZFAND3Q9H8U3 227 aa9.57□□□□□ -0.88
EPHA4-205ENST00000419964 TERF2IPQ9NYB0 399 aa9.57□□□□□ -0.88
EPHA4-205ENST00000419964 ANKRD36BQ8N2N9 1353 aa9.57□□□□□ -0.88
EPHA4-205ENST00000419964 ABCC11Q96J66 1382 aa9.57□□□□□ -0.88
EPHA4-205ENST00000419964 PTPRMP28827 1452 aa9.57□□□□□ -0.88
EPHA4-205ENST00000419964 FAM135BQ49AJ0 1406 aa9.56□□□□□ -0.88
EPHA4-205ENST00000419964 SMG6Q86US8 1419 aaKnown RBP9.56□□□□□ -0.88
EPHA4-205ENST00000419964 TMEM2Q9UHN6 1383 aa9.56□□□□□ -0.88
EPHA4-205ENST00000419964 ADH1AP07327 375 aa9.56□□□□□ -0.88
EPHA4-205ENST00000419964 TMEM164Q5U3C3 297 aa9.56□□□□□ -0.88
EPHA4-205ENST00000419964 STK32AQ8WU08 396 aa9.56□□□□□ -0.88
EPHA4-205ENST00000419964 EID1Q9Y6B2 187 aa9.56□□□□□ -0.88
EPHA4-205ENST00000419964 UBR1Q8IWV7 1749 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms