RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 NLRP10Q86W26 655 aa26.23■■□□□ 1.79
GTF3A-202ENST00000419181 UTP14AQ9BVJ6 771 aaKnown RBP26.23■■□□□ 1.79
GTF3A-202ENST00000419181 RNF123Q5XPI4 1314 aa26.22■■□□□ 1.79
GTF3A-202ENST00000419181 C21orf2O43822 256 aa26.22■■□□□ 1.79
GTF3A-202ENST00000419181 RASSF7Q02833 373 aa26.22■■□□□ 1.79
GTF3A-202ENST00000419181 PHAXQ9H814 394 aaKnown RBP26.22■■□□□ 1.79
GTF3A-202ENST00000419181 NFKBIEO00221 500 aa26.21■■□□□ 1.79
GTF3A-202ENST00000419181 TWISTNBQ3B726 338 aaPredicted RBP26.21■■□□□ 1.79
GTF3A-202ENST00000419181 CCER2I3L3R5 266 aa26.2■■□□□ 1.78
GTF3A-202ENST00000419181 ZNF219Q9P2Y4 722 aaPredicted RBP26.2■■□□□ 1.78
GTF3A-202ENST00000419181 C7orf43Q8WVR3 580 aa26.19■■□□□ 1.78
GTF3A-202ENST00000419181 ISCA1Q9BUE6 129 aa26.19■■□□□ 1.78
GTF3A-202ENST00000419181 SPINK5Q9NQ38 1064 aaPredicted RBP26.19■■□□□ 1.78
GTF3A-202ENST00000419181 RNF181Q9P0P0 153 aa26.19■■□□□ 1.78
GTF3A-202ENST00000419181 CCDC88AQ3V6T2 1871 aa26.19■■□□□ 1.78
GTF3A-202ENST00000419181 ZNF521Q96K83 1311 aa26.18■■□□□ 1.78
GTF3A-202ENST00000419181 PRELPP51888 382 aa26.18■■□□□ 1.78
GTF3A-202ENST00000419181 GOLGA2Q08379 1002 aa26.18■■□□□ 1.78
GTF3A-202ENST00000419181 SLC10A5Q5PT55 438 aa26.18■■□□□ 1.78
GTF3A-202ENST00000419181 LMNB1P20700 586 aa26.17■■□□□ 1.78
GTF3A-202ENST00000419181 ALDH1B1P30837 517 aa26.17■■□□□ 1.78
GTF3A-202ENST00000419181 SOGA3Q5TF21 947 aa26.17■■□□□ 1.78
GTF3A-202ENST00000419181 LAMB2P55268 1798 aa26.17■■□□□ 1.78
GTF3A-202ENST00000419181 HOXA10P31260 410 aaPredicted RBP26.16■■□□□ 1.78
GTF3A-202ENST00000419181 C3orf67Q6ZVT6 689 aa26.16■■□□□ 1.78
GTF3A-202ENST00000419181 RIC3Q7Z5B4 369 aa26.16■■□□□ 1.78
GTF3A-202ENST00000419181 TRMT112Q9UI30 125 aaKnown RBP26.16■■□□□ 1.78
GTF3A-202ENST00000419181 LTBP3Q9NS15 1303 aa26.15■■□□□ 1.78
GTF3A-202ENST00000419181 TIAM2Q8IVF5 1701 aa26.15■■□□□ 1.78
GTF3A-202ENST00000419181 TRIM28Q13263 835 aaKnown RBP26.15■■□□□ 1.78
GTF3A-202ENST00000419181 RPGRQ92834 1020 aaKnown RBP26.15■■□□□ 1.78
GTF3A-202ENST00000419181 STK31Q9BXU1 1019 aa26.15■■□□□ 1.78
GTF3A-202ENST00000419181 MYH16Q9H6N6 1097 aa26.15■■□□□ 1.78
GTF3A-202ENST00000419181 SH3TC1Q8TE82 1336 aa26.14■■□□□ 1.78
GTF3A-202ENST00000419181 ATP5J2-PTCD1G3V325 749 aa26.14■■□□□ 1.78
GTF3A-202ENST00000419181 SYNE4Q8N205 404 aa26.14■■□□□ 1.78
GTF3A-202ENST00000419181 NLRP3Q96P20 1036 aa26.14■■□□□ 1.78
GTF3A-202ENST00000419181 CACNA1FO60840 1977 aa26.14■■□□□ 1.77
GTF3A-202ENST00000419181 DDX60Q8IY21 1712 aaKnown RBP26.14■■□□□ 1.77
GTF3A-202ENST00000419181 TCERG1O14776 1098 aaKnown RBP26.13■■□□□ 1.77
GTF3A-202ENST00000419181 EXOSC9Q06265 439 aaKnown RBP26.13■■□□□ 1.77
GTF3A-202ENST00000419181 TAOK3Q9H2K8 898 aa26.13■■□□□ 1.77
GTF3A-202ENST00000419181 DICER1Q9UPY3 1922 aaKnown RBP26.13■■□□□ 1.77
GTF3A-202ENST00000419181 ZC3H4Q9UPT8 1303 aaKnown RBP26.13■■□□□ 1.77
GTF3A-202ENST00000419181 VAMP4O75379 141 aa26.12■■□□□ 1.77
GTF3A-202ENST00000419181 DDX58O95786 925 aaKnown RBP26.12■■□□□ 1.77
GTF3A-202ENST00000419181 CCDC93Q567U6 631 aa26.12■■□□□ 1.77
GTF3A-202ENST00000419181 CRAMP1Q96RY5 1269 aa26.12■■□□□ 1.77
GTF3A-202ENST00000419181 HCLS1P14317 486 aaPredicted RBP26.11■■□□□ 1.77
GTF3A-202ENST00000419181 ZNF428Q96B54 188 aa26.11■■□□□ 1.77
GTF3A-202ENST00000419181 RBM17Q96I25 401 aaKnown RBP26.11■■□□□ 1.77
GTF3A-202ENST00000419181 SLC4A2P04920 1241 aa26.1■■□□□ 1.77
GTF3A-202ENST00000419181 OLFM4Q6UX06 510 aa26.1■■□□□ 1.77
GTF3A-202ENST00000419181 SNED1Q8TER0 1413 aa26.1■■□□□ 1.77
GTF3A-202ENST00000419181 KSR2Q6VAB6 950 aa26.09■■□□□ 1.77
GTF3A-202ENST00000419181 FAM89AQ96GI7 184 aa26.09■■□□□ 1.77
GTF3A-202ENST00000419181 MYD88Q99836 296 aa26.09■■□□□ 1.77
GTF3A-202ENST00000419181 METTL22Q9BUU2 404 aaPredicted RBP26.09■■□□□ 1.77
GTF3A-202ENST00000419181 G2E3Q7L622 706 aa26.08■■□□□ 1.77
GTF3A-202ENST00000419181 MAP3K2Q9Y2U5 619 aa26.08■■□□□ 1.77
GTF3A-202ENST00000419181 PI4KAP2A4QPH2 592 aa26.07■■□□□ 1.76
GTF3A-202ENST00000419181 RTKN2Q8IZC4 609 aa26.07■■□□□ 1.76
GTF3A-202ENST00000419181 PI4KAP1Q8N8J0 262 aa26.07■■□□□ 1.76
GTF3A-202ENST00000419181 DIEXFQ68CQ4 756 aaKnown RBP26.06■■□□□ 1.76
GTF3A-202ENST00000419181 CCDC191Q8NCU4 936 aa26.06■■□□□ 1.76
GTF3A-202ENST00000419181 ABCC4O15439 1325 aa26.06■■□□□ 1.76
GTF3A-202ENST00000419181 KIF3CO14782 793 aa26.05■■□□□ 1.76
GTF3A-202ENST00000419181 FKBP4Q02790 459 aaKnown RBP eCLIP26.05■■□□□ 1.76
GTF3A-202ENST00000419181 FLIIQ13045 1269 aa26.05■■□□□ 1.76
GTF3A-202ENST00000419181 CC2D2BQ6DHV5 1058 aa26.05■■□□□ 1.76
GTF3A-202ENST00000419181 PPEF1O14829 653 aaPredicted RBP26.04■■□□□ 1.76
GTF3A-202ENST00000419181 ZBTB38Q8NAP3 1195 aaPredicted RBP26.04■■□□□ 1.76
GTF3A-202ENST00000419181 KDM2BQ8NHM5 1336 aa26.04■■□□□ 1.76
GTF3A-202ENST00000419181 RTL5Q5HYW3 569 aaPredicted RBP26.03■■□□□ 1.76
GTF3A-202ENST00000419181 NMRK2Q9NPI5 230 aa26.03■■□□□ 1.76
GTF3A-202ENST00000419181 CWC25Q9NXE8 425 aaPredicted RBP26.03■■□□□ 1.76
GTF3A-202ENST00000419181 TAF1P21675 1872 aa26.02■■□□□ 1.76
GTF3A-202ENST00000419181 IRS4O14654 1257 aaPredicted RBP26.02■■□□□ 1.76
GTF3A-202ENST00000419181 SLC51AQ86UW1 340 aa26.02■■□□□ 1.76
GTF3A-202ENST00000419181 E9PSI1 815 aa26.01■■□□□ 1.75
GTF3A-202ENST00000419181 PCCAP05165 728 aaPredicted RBP26.01■■□□□ 1.75
GTF3A-202ENST00000419181 IGKV5-2P06315 115 aa26.01■■□□□ 1.75
GTF3A-202ENST00000419181 SF3B3Q15393 1217 aaKnown RBP26.01■■□□□ 1.75
GTF3A-202ENST00000419181 DDX46Q7L014 1031 aaKnown RBP26.01■■□□□ 1.75
GTF3A-202ENST00000419181 PSMD1Q99460 953 aa26.01■■□□□ 1.75
GTF3A-202ENST00000419181 GLTPD2A6NH11 291 aa26■■□□□ 1.75
GTF3A-202ENST00000419181 NEXNQ0ZGT2 675 aa26■■□□□ 1.75
GTF3A-202ENST00000419181 GRIPAP1Q4V328 841 aa26■■□□□ 1.75
GTF3A-202ENST00000419181 ZNF277Q9NRM2 450 aaPredicted RBP26■■□□□ 1.75
GTF3A-202ENST00000419181 ATP6V0A2Q9Y487 856 aa26■■□□□ 1.75
GTF3A-202ENST00000419181 BBOX1O75936 387 aa25.99■■□□□ 1.75
GTF3A-202ENST00000419181 FKBP5Q13451 457 aaPredicted RBP25.99■■□□□ 1.75
GTF3A-202ENST00000419181 GRAPQ13588 217 aa25.99■■□□□ 1.75
GTF3A-202ENST00000419181 MIER1Q8N108 512 aa25.99■■□□□ 1.75
GTF3A-202ENST00000419181 GRAPLQ8TC17 118 aaPredicted RBP25.99■■□□□ 1.75
GTF3A-202ENST00000419181 SLFN5Q08AF3 891 aa25.98■■□□□ 1.75
GTF3A-202ENST00000419181 LRRC37AA6NMS7 1700 aa25.97■■□□□ 1.75
GTF3A-202ENST00000419181 HSP90B1P14625 803 aaKnown RBP25.97■■□□□ 1.75
GTF3A-202ENST00000419181 CWF19L2Q2TBE0 894 aaKnown RBP25.97■■□□□ 1.75
GTF3A-202ENST00000419181 COL4A1P02462 1669 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms