RNA–Protein interactions for RNA: ENST00000419021.1

SEC61A2-208, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 5

Gene SEC61A2, Length 778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-208ENST00000419021 PARP3Q9Y6F1 533 aa12.84□□□□□ -0.35
SEC61A2-208ENST00000419021 TAF1P21675 1872 aa12.83□□□□□ -0.36
SEC61A2-208ENST00000419021 KLRG2A4D1S0 409 aaPredicted RBP12.83□□□□□ -0.36
SEC61A2-208ENST00000419021 TRIM27P14373 513 aa12.83□□□□□ -0.36
SEC61A2-208ENST00000419021 CASP7P55210 303 aa12.83□□□□□ -0.36
SEC61A2-208ENST00000419021 CWF19L2Q2TBE0 894 aaKnown RBP12.83□□□□□ -0.36
SEC61A2-208ENST00000419021 SYNE4Q8N205 404 aa12.83□□□□□ -0.36
SEC61A2-208ENST00000419021 CCDC191Q8NCU4 936 aa12.83□□□□□ -0.36
SEC61A2-208ENST00000419021 LINS1Q8NG48 757 aa12.83□□□□□ -0.36
SEC61A2-208ENST00000419021 FHDC1Q9C0D6 1143 aaPredicted RBP12.83□□□□□ -0.36
SEC61A2-208ENST00000419021 RCAN3Q9UKA8 241 aa12.83□□□□□ -0.36
SEC61A2-208ENST00000419021 CD2APQ9Y5K6 639 aa12.83□□□□□ -0.36
SEC61A2-208ENST00000419021 RNF123Q5XPI4 1314 aa12.83□□□□□ -0.36
SEC61A2-208ENST00000419021 ARFGEF1Q9Y6D6 1849 aa12.83□□□□□ -0.36
SEC61A2-208ENST00000419021 CACNA1SQ13698 1873 aa12.82□□□□□ -0.36
SEC61A2-208ENST00000419021 SLC10A5Q5PT55 438 aa12.82□□□□□ -0.36
SEC61A2-208ENST00000419021 C3orf67Q6ZVT6 689 aa12.82□□□□□ -0.36
SEC61A2-208ENST00000419021 NBPF5PQ86XG9 351 aaPredicted RBP12.82□□□□□ -0.36
SEC61A2-208ENST00000419021 CNBD1Q8NA66 436 aa12.82□□□□□ -0.36
SEC61A2-208ENST00000419021 KCNA3P22001 575 aa12.81□□□□□ -0.36
SEC61A2-208ENST00000419021 GCKRQ14397 625 aa12.81□□□□□ -0.36
SEC61A2-208ENST00000419021 ERFEQ4G0M1 354 aa12.81□□□□□ -0.36
SEC61A2-208ENST00000419021 NUTM1Q86Y26 1132 aa12.81□□□□□ -0.36
SEC61A2-208ENST00000419021 CCDC24Q8N4L8 307 aa12.81□□□□□ -0.36
SEC61A2-208ENST00000419021 NLGN2Q8NFZ4 835 aa12.81□□□□□ -0.36
SEC61A2-208ENST00000419021 SLX4Q8IY92 1834 aa12.81□□□□□ -0.36
SEC61A2-208ENST00000419021 H7C1W4 665 aa12.8□□□□□ -0.36
SEC61A2-208ENST00000419021 PCCAP05165 728 aaPredicted RBP12.8□□□□□ -0.36
SEC61A2-208ENST00000419021 RLBP1P12271 317 aa12.8□□□□□ -0.36
SEC61A2-208ENST00000419021 CRY2Q49AN0 593 aa12.8□□□□□ -0.36
SEC61A2-208ENST00000419021 ATF7IPQ6VMQ6 1270 aa12.8□□□□□ -0.36
SEC61A2-208ENST00000419021 TPTE2Q6XPS3 522 aa12.8□□□□□ -0.36
SEC61A2-208ENST00000419021 SYT17Q9BSW7 474 aa12.8□□□□□ -0.36
SEC61A2-208ENST00000419021 UTP14AQ9BVJ6 771 aaKnown RBP12.8□□□□□ -0.36
SEC61A2-208ENST00000419021 BRIP1Q9BX63 1249 aa12.8□□□□□ -0.36
SEC61A2-208ENST00000419021 API5Q9BZZ5 524 aaKnown RBP12.8□□□□□ -0.36
SEC61A2-208ENST00000419021 NYXQ9GZU5 481 aa12.8□□□□□ -0.36
SEC61A2-208ENST00000419021 CWC25Q9NXE8 425 aaPredicted RBP12.8□□□□□ -0.36
SEC61A2-208ENST00000419021 UTYO14607 1347 aa12.8□□□□□ -0.36
SEC61A2-208ENST00000419021 CDHR2Q9BYE9 1310 aa12.8□□□□□ -0.36
SEC61A2-208ENST00000419021 FAM177BA6PVY3 158 aa12.79□□□□□ -0.36
SEC61A2-208ENST00000419021 ALDH1L1O75891 902 aa12.79□□□□□ -0.36
SEC61A2-208ENST00000419021 INTS3Q68E01 1043 aaKnown RBP12.79□□□□□ -0.36
SEC61A2-208ENST00000419021 PPP1R42Q7Z4L9 355 aa12.79□□□□□ -0.36
SEC61A2-208ENST00000419021 ZBTB38Q8NAP3 1195 aaPredicted RBP12.79□□□□□ -0.36
SEC61A2-208ENST00000419021 FAM89AQ96GI7 184 aa12.79□□□□□ -0.36
SEC61A2-208ENST00000419021 SH3TC1Q8TE82 1336 aa12.79□□□□□ -0.36
SEC61A2-208ENST00000419021 UTRNP46939 3433 aa12.79□□□□□ -0.36
SEC61A2-208ENST00000419021 NEXNQ0ZGT2 675 aa12.78□□□□□ -0.36
SEC61A2-208ENST00000419021 ZKSCAN2Q63HK3 967 aa12.78□□□□□ -0.36
SEC61A2-208ENST00000419021 KAZALD1Q96I82 304 aa12.78□□□□□ -0.36
SEC61A2-208ENST00000419021 TRMT112Q9UI30 125 aaKnown RBP12.78□□□□□ -0.36
SEC61A2-208ENST00000419021 LRRC37AA6NMS7 1700 aa12.78□□□□□ -0.36
SEC61A2-208ENST00000419021 HCLS1P14317 486 aaPredicted RBP12.77□□□□□ -0.37
SEC61A2-208ENST00000419021 DPEP1P16444 411 aa12.77□□□□□ -0.37
SEC61A2-208ENST00000419021 CHRNA5P30532 468 aa12.77□□□□□ -0.37
SEC61A2-208ENST00000419021 TGFB2P61812 414 aa12.77□□□□□ -0.37
SEC61A2-208ENST00000419021 JARID2Q92833 1246 aaPredicted RBP12.77□□□□□ -0.37
SEC61A2-208ENST00000419021 PLA2G12BQ9BX93 195 aa12.77□□□□□ -0.37
SEC61A2-208ENST00000419021 SRCIN1Q9C0H9 1055 aa12.77□□□□□ -0.37
SEC61A2-208ENST00000419021 USP44Q9H0E7 712 aa12.77□□□□□ -0.37
SEC61A2-208ENST00000419021 SNED1Q8TER0 1413 aa12.77□□□□□ -0.37
SEC61A2-208ENST00000419021 A0A1B0GUL6 1792 aa12.76□□□□□ -0.37
SEC61A2-208ENST00000419021 GRM8O00222 908 aa12.76□□□□□ -0.37
SEC61A2-208ENST00000419021 IPO8O15397 1037 aaKnown RBP12.76□□□□□ -0.37
SEC61A2-208ENST00000419021 SRGNP10124 158 aa12.76□□□□□ -0.37
SEC61A2-208ENST00000419021 HOXA10P31260 410 aaPredicted RBP12.76□□□□□ -0.37
SEC61A2-208ENST00000419021 ST5P78524 1137 aa12.76□□□□□ -0.37
SEC61A2-208ENST00000419021 SLC4A10Q6U841 1118 aa12.76□□□□□ -0.37
SEC61A2-208ENST00000419021 UBE3BQ7Z3V4 1068 aa12.76□□□□□ -0.37
SEC61A2-208ENST00000419021 FRAT1Q92837 279 aaPredicted RBP12.76□□□□□ -0.37
SEC61A2-208ENST00000419021 LTBP1Q14766 1721 aa12.76□□□□□ -0.37
SEC61A2-208ENST00000419021 SPEF2Q9C093 1822 aa12.76□□□□□ -0.37
SEC61A2-208ENST00000419021 FER1L6Q2WGJ9 1857 aa12.76□□□□□ -0.37
SEC61A2-208ENST00000419021 A0A0G2JLW4 131 aa12.75□□□□□ -0.37
SEC61A2-208ENST00000419021 IRS4O14654 1257 aaPredicted RBP12.75□□□□□ -0.37
SEC61A2-208ENST00000419021 PLIN1O60240 522 aa12.75□□□□□ -0.37
SEC61A2-208ENST00000419021 NBPF7P0C2Y1 421 aaPredicted RBP12.75□□□□□ -0.37
SEC61A2-208ENST00000419021 CCT4P50991 539 aaKnown RBP12.75□□□□□ -0.37
SEC61A2-208ENST00000419021 SF3B3Q15393 1217 aaKnown RBP12.75□□□□□ -0.37
SEC61A2-208ENST00000419021 EPHA10Q5JZY3 1008 aa12.75□□□□□ -0.37
SEC61A2-208ENST00000419021 TMEM57Q8N5G2 664 aa12.75□□□□□ -0.37
SEC61A2-208ENST00000419021 PPP1R1BQ9UD71 204 aaPredicted RBP12.75□□□□□ -0.37
SEC61A2-208ENST00000419021 RTL9Q8NET4 1388 aa12.74□□□□□ -0.37
SEC61A2-208ENST00000419021 PDE6BP35913 854 aa12.74□□□□□ -0.37
SEC61A2-208ENST00000419021 FOXO4P98177 505 aa12.74□□□□□ -0.37
SEC61A2-208ENST00000419021 RTL5Q5HYW3 569 aaPredicted RBP12.74□□□□□ -0.37
SEC61A2-208ENST00000419021 C20orf194Q5TEA3 1177 aa12.74□□□□□ -0.37
SEC61A2-208ENST00000419021 C2CD5Q86YS7 1000 aa12.74□□□□□ -0.37
SEC61A2-208ENST00000419021 CLUAP1Q96AJ1 413 aa12.74□□□□□ -0.37
SEC61A2-208ENST00000419021 PDZRN3Q9UPQ7 1066 aa12.74□□□□□ -0.37
SEC61A2-208ENST00000419021 CSF1RP07333 972 aa12.73□□□□□ -0.37
SEC61A2-208ENST00000419021 STYK1Q6J9G0 422 aa12.73□□□□□ -0.37
SEC61A2-208ENST00000419021 SLC51AQ86UW1 340 aa12.73□□□□□ -0.37
SEC61A2-208ENST00000419021 DZIP1LQ8IYY4 767 aaKnown RBP12.73□□□□□ -0.37
SEC61A2-208ENST00000419021 PANK1Q8TE04 598 aa12.73□□□□□ -0.37
SEC61A2-208ENST00000419021 MEIS3Q99687 375 aa12.73□□□□□ -0.37
SEC61A2-208ENST00000419021 SBF1O95248 1867 aa12.73□□□□□ -0.37
SEC61A2-208ENST00000419021 PDE8AO60658 829 aa12.72□□□□□ -0.37
SEC61A2-208ENST00000419021 NPR1P16066 1061 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms