RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 ANKIB1Q9P2G1 1089 aa8.48□□□□□ -1.05
RFC4-204ENST00000417876 KCNMB2Q9Y691 235 aa8.48□□□□□ -1.05
RFC4-204ENST00000417876 LDHBP07195 334 aaKnown RBP8.47□□□□□ -1.05
RFC4-204ENST00000417876 ORC1Q13415 861 aa8.47□□□□□ -1.05
RFC4-204ENST00000417876 TRIP4Q15650 581 aaPredicted RBP8.47□□□□□ -1.05
RFC4-204ENST00000417876 HIF1AQ16665 826 aa8.47□□□□□ -1.05
RFC4-204ENST00000417876 CFHR5Q9BXR6 569 aa8.47□□□□□ -1.05
RFC4-204ENST00000417876 CRISPLD1Q9H336 500 aa8.47□□□□□ -1.05
RFC4-204ENST00000417876 ATP13A2Q9NQ11 1180 aa8.47□□□□□ -1.05
RFC4-204ENST00000417876 RTCBQ9Y3I0 505 aaKnown RBP8.47□□□□□ -1.05
RFC4-204ENST00000417876 DYRK1BQ9Y463 629 aa8.47□□□□□ -1.05
RFC4-204ENST00000417876 F11P03951 625 aa8.46□□□□□ -1.06
RFC4-204ENST00000417876 ENOX2Q16206 610 aaKnown RBP8.46□□□□□ -1.06
RFC4-204ENST00000417876 PIK3R5Q8WYR1 880 aa8.46□□□□□ -1.06
RFC4-204ENST00000417876 FAM161BQ96MY7 647 aa8.46□□□□□ -1.06
RFC4-204ENST00000417876 GAS2L1Q99501 681 aaPredicted RBP8.46□□□□□ -1.06
RFC4-204ENST00000417876 ARSDP51689 593 aa8.45□□□□□ -1.06
RFC4-204ENST00000417876 TYRO3Q06418 890 aa8.45□□□□□ -1.06
RFC4-204ENST00000417876 CMTR1Q8N1G2 835 aaKnown RBP8.45□□□□□ -1.06
RFC4-204ENST00000417876 DUSP9Q99956 384 aaKnown RBP8.45□□□□□ -1.06
RFC4-204ENST00000417876 ZCCHC2Q9C0B9 1178 aaKnown RBP8.45□□□□□ -1.06
RFC4-204ENST00000417876 NEUROD4Q9HD90 331 aa8.45□□□□□ -1.06
RFC4-204ENST00000417876 PNMA6FA0A0J9YX94 578 aa8.44□□□□□ -1.06
RFC4-204ENST00000417876 VAMP1P23763 118 aa8.44□□□□□ -1.06
RFC4-204ENST00000417876 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.44□□□□□ -1.06
RFC4-204ENST00000417876 LDLRAD1Q5T700 205 aa8.44□□□□□ -1.06
RFC4-204ENST00000417876 CSRNP1Q96S65 589 aa8.44□□□□□ -1.06
RFC4-204ENST00000417876 FAM13BQ9NYF5 915 aa8.44□□□□□ -1.06
RFC4-204ENST00000417876 PARP2Q9UGN5 583 aa8.44□□□□□ -1.06
RFC4-204ENST00000417876 FOXD3Q9UJU5 478 aaPredicted RBP8.44□□□□□ -1.06
RFC4-204ENST00000417876 HCN2Q9UL51 889 aa8.44□□□□□ -1.06
RFC4-204ENST00000417876 EIF1AYO14602 144 aaKnown RBP8.43□□□□□ -1.06
RFC4-204ENST00000417876 RECKO95980 971 aa8.43□□□□□ -1.06
RFC4-204ENST00000417876 PCSK2P16519 638 aa8.43□□□□□ -1.06
RFC4-204ENST00000417876 UBAP2LQ14157 1087 aaKnown RBP8.43□□□□□ -1.06
RFC4-204ENST00000417876 MRPL58Q14197 206 aaKnown RBP8.43□□□□□ -1.06
RFC4-204ENST00000417876 LAPTM4AQ15012 233 aa8.43□□□□□ -1.06
RFC4-204ENST00000417876 XKR5Q6UX68 686 aa8.43□□□□□ -1.06
RFC4-204ENST00000417876 CEP63Q96MT8 703 aa8.43□□□□□ -1.06
RFC4-204ENST00000417876 SLC35F4A4IF30 521 aa8.42□□□□□ -1.06
RFC4-204ENST00000417876 MAN1A2O60476 641 aa8.42□□□□□ -1.06
RFC4-204ENST00000417876 PRPF40AO75400 957 aaKnown RBP8.42□□□□□ -1.06
RFC4-204ENST00000417876 TNFRSF21O75509 655 aa8.42□□□□□ -1.06
RFC4-204ENST00000417876 PTSQ03393 145 aa8.42□□□□□ -1.06
RFC4-204ENST00000417876 USPL1Q5W0Q7 1092 aa8.42□□□□□ -1.06
RFC4-204ENST00000417876 CUEDC1Q9NWM3 386 aaPredicted RBP8.42□□□□□ -1.06
RFC4-204ENST00000417876 TMEM63CQ9P1W3 806 aa8.42□□□□□ -1.06
RFC4-204ENST00000417876 UBAP1LF5GYI3 381 aa8.41□□□□□ -1.06
RFC4-204ENST00000417876 NLRP8Q86W28 1048 aa8.41□□□□□ -1.06
RFC4-204ENST00000417876 BACH2Q9BYV9 841 aa8.41□□□□□ -1.06
RFC4-204ENST00000417876 RPLP1P05386 114 aaKnown RBP8.4□□□□□ -1.06
RFC4-204ENST00000417876 DAB2P98082 770 aa8.4□□□□□ -1.06
RFC4-204ENST00000417876 SFSWAPQ12872 951 aaKnown RBP8.4□□□□□ -1.06
RFC4-204ENST00000417876 GRIN2CQ14957 1233 aa8.4□□□□□ -1.06
RFC4-204ENST00000417876 SAMD5Q5TGI4 173 aa8.4□□□□□ -1.06
RFC4-204ENST00000417876 PGBD3Q8N328 593 aa8.4□□□□□ -1.06
RFC4-204ENST00000417876 ELP3Q9H9T3 547 aa8.4□□□□□ -1.06
RFC4-204ENST00000417876 BRD7Q9NPI1 651 aa8.4□□□□□ -1.06
RFC4-204ENST00000417876 GJA3Q9Y6H8 435 aa8.4□□□□□ -1.06
RFC4-204ENST00000417876 XYLBO75191 536 aa8.39□□□□□ -1.07
RFC4-204ENST00000417876 DBN1Q16643 649 aa8.39□□□□□ -1.07
RFC4-204ENST00000417876 PDE12Q6L8Q7 609 aaKnown RBP8.39□□□□□ -1.07
RFC4-204ENST00000417876 TMC4Q7Z404 712 aa8.39□□□□□ -1.07
RFC4-204ENST00000417876 ZNF438Q7Z4V0 828 aa8.39□□□□□ -1.07
RFC4-204ENST00000417876 CNTN3Q9P232 1028 aa8.39□□□□□ -1.07
RFC4-204ENST00000417876 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.39□□□□□ -1.07
RFC4-204ENST00000417876 EFSO43281 561 aa8.38□□□□□ -1.07
RFC4-204ENST00000417876 EGFRP00533 1210 aa8.38□□□□□ -1.07
RFC4-204ENST00000417876 XPCQ01831 940 aaPredicted RBP8.38□□□□□ -1.07
RFC4-204ENST00000417876 TSNAXIP1Q2TAA8 658 aa8.38□□□□□ -1.07
RFC4-204ENST00000417876 ALG1LQ6GMV1 187 aa8.38□□□□□ -1.07
RFC4-204ENST00000417876 PI16Q6UXB8 463 aa8.38□□□□□ -1.07
RFC4-204ENST00000417876 RIPOR1Q6ZS17 1223 aa8.38□□□□□ -1.07
RFC4-204ENST00000417876 TTC16Q8NEE8 873 aa8.38□□□□□ -1.07
RFC4-204ENST00000417876 DNAJC25Q9H1X3 360 aa8.38□□□□□ -1.07
RFC4-204ENST00000417876 CHRDQ9H2X0 955 aa8.38□□□□□ -1.07
RFC4-204ENST00000417876 ZFYVE28Q9HCC9 887 aa8.38□□□□□ -1.07
RFC4-204ENST00000417876 STRN4Q9NRL3 753 aa8.38□□□□□ -1.07
RFC4-204ENST00000417876 FNDC3AQ9Y2H6 1198 aaKnown RBP8.38□□□□□ -1.07
RFC4-204ENST00000417876 CPNE3O75131 537 aaKnown RBP8.37□□□□□ -1.07
RFC4-204ENST00000417876 IRS1P35568 1242 aa8.37□□□□□ -1.07
RFC4-204ENST00000417876 KCNQ4P56696 695 aa8.37□□□□□ -1.07
RFC4-204ENST00000417876 ATP2B2Q01814 1243 aa8.37□□□□□ -1.07
RFC4-204ENST00000417876 EFHC2Q5JST6 749 aa8.37□□□□□ -1.07
RFC4-204ENST00000417876 CCDC155Q8N6L0 562 aa8.37□□□□□ -1.07
RFC4-204ENST00000417876 C1orf127Q8N9H9 656 aa8.37□□□□□ -1.07
RFC4-204ENST00000417876 ATXN7O15265 892 aaPredicted RBP8.36□□□□□ -1.07
RFC4-204ENST00000417876 BNIP3LO60238 219 aa8.36□□□□□ -1.07
RFC4-204ENST00000417876 POLR3DP05423 398 aaPredicted RBP8.36□□□□□ -1.07
RFC4-204ENST00000417876 TCF3P15923 654 aa8.36□□□□□ -1.07
RFC4-204ENST00000417876 TNP2Q05952 138 aa8.36□□□□□ -1.07
RFC4-204ENST00000417876 EPS8L3Q8TE67 593 aaKnown RBP8.36□□□□□ -1.07
RFC4-204ENST00000417876 GSX2Q9BZM3 304 aa8.36□□□□□ -1.07
RFC4-204ENST00000417876 NDFIP2Q9NV92 336 aa8.36□□□□□ -1.07
RFC4-204ENST00000417876 GMPR2Q9P2T1 348 aaKnown RBP8.36□□□□□ -1.07
RFC4-204ENST00000417876 DCDC2BA2VCK2 349 aa8.35□□□□□ -1.07
RFC4-204ENST00000417876 EREGO14944 169 aa8.35□□□□□ -1.07
RFC4-204ENST00000417876 SASH3O75995 380 aa8.35□□□□□ -1.07
RFC4-204ENST00000417876 FAM157BP0CG42 384 aa8.35□□□□□ -1.07
RFC4-204ENST00000417876 EPB42P16452 691 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms